RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 EIF4EBP3O60516 100 aaPredicted RBP15.77■□□□□ 0.12
CBX4-202ENST00000448310 SLC25A20O43772 301 aa15.75■□□□□ 0.11
CBX4-202ENST00000448310 SEC61BP60468 96 aaKnown RBP15.75■□□□□ 0.11
CBX4-202ENST00000448310 C9orf153Q5TBE3 101 aa15.75■□□□□ 0.11
CBX4-202ENST00000448310 ADAMTSL4-AS1Q5T5F5 129 aa15.73■□□□□ 0.11
CBX4-202ENST00000448310 ST20-AS1Q8NBB2 130 aa15.73■□□□□ 0.11
CBX4-202ENST00000448310 ZNF73O43830 326 aaPredicted RBP15.72■□□□□ 0.11
CBX4-202ENST00000448310 JOSD1Q15040 202 aaPredicted RBP15.72■□□□□ 0.11
CBX4-202ENST00000448310 A0A0J9YXY3 114 aa15.71■□□□□ 0.11
CBX4-202ENST00000448310 KRTAP9-6A0A140TA67 174 aa15.71■□□□□ 0.11
CBX4-202ENST00000448310 LINC01547P58512 204 aaPredicted RBP15.68■□□□□ 0.1
CBX4-202ENST00000448310 E9PLD3 99 aa15.64■□□□□ 0.09
CBX4-202ENST00000448310 XP32Q5T750 250 aa15.64■□□□□ 0.09
CBX4-202ENST00000448310 COLCA2A8K830 154 aa15.59■□□□□ 0.09
CBX4-202ENST00000448310 HINT1P49773 126 aaPredicted RBP15.59■□□□□ 0.09
CBX4-202ENST00000448310 OR13C6PQ8NH95 151 aa15.58■□□□□ 0.08
CBX4-202ENST00000448310 LINC00308Q8TCZ7 52 aa15.58■□□□□ 0.08
CBX4-202ENST00000448310 LITAFQ99732 161 aa15.58■□□□□ 0.08
CBX4-202ENST00000448310 C5orf52A6NGY3 159 aa15.56■□□□□ 0.08
CBX4-202ENST00000448310 HRCT1Q6UXD1 115 aa15.56■□□□□ 0.08
CBX4-202ENST00000448310 SPANXCQ9NY87 97 aa15.56■□□□□ 0.08
CBX4-202ENST00000448310 CBY1Q9Y3M2 126 aa15.55■□□□□ 0.08
CBX4-202ENST00000448310 SYS1-DBNDD2H3BUS1 97 aa15.53■□□□□ 0.08
CBX4-202ENST00000448310 SPRR1BP22528 89 aa15.53■□□□□ 0.08
CBX4-202ENST00000448310 SLC7A5P1Q8MH63 180 aa15.51■□□□□ 0.07
CBX4-202ENST00000448310 DHRS4-AS1Q9P1J3 65 aa15.5■□□□□ 0.07
CBX4-202ENST00000448310 TIMM17BO60830 172 aa15.49■□□□□ 0.07
CBX4-202ENST00000448310 SLC25A34Q6PIV7 304 aa15.48■□□□□ 0.07
CBX4-202ENST00000448310 LIMD2Q9BT23 127 aa15.48■□□□□ 0.07
CBX4-202ENST00000448310 TTTY13Q9BZ97 58 aa15.48■□□□□ 0.07
CBX4-202ENST00000448310 SPANXDQ9BXN6 97 aa15.47■□□□□ 0.07
CBX4-202ENST00000448310 ZNF815PA8K554 130 aa15.46■□□□□ 0.07
CBX4-202ENST00000448310 LAMTOR3Q9UHA4 124 aa15.46■□□□□ 0.07
CBX4-202ENST00000448310 C9orf92A6NGG3 77 aa15.45■□□□□ 0.06
CBX4-202ENST00000448310 LINC01545Q5VT33 79 aa15.45■□□□□ 0.06
CBX4-202ENST00000448310 COX7BP24311 80 aa15.44■□□□□ 0.06
CBX4-202ENST00000448310 ELOF1P60002 83 aaKnown RBP15.44■□□□□ 0.06
CBX4-202ENST00000448310 C6orf99Q4VX62 202 aa15.44■□□□□ 0.06
CBX4-202ENST00000448310 LCE2CQ5TA81 110 aa15.44■□□□□ 0.06
CBX4-202ENST00000448310 HIST1H2BKO60814 126 aa15.42■□□□□ 0.06
CBX4-202ENST00000448310 HIST1H2BJP06899 126 aa15.42■□□□□ 0.06
CBX4-202ENST00000448310 HIST1H2BOP23527 126 aa15.42■□□□□ 0.06
CBX4-202ENST00000448310 HIST1H2BBP33778 126 aa15.42■□□□□ 0.06
CBX4-202ENST00000448310 HIST1H2BDP58876 126 aa15.42■□□□□ 0.06
CBX4-202ENST00000448310 HIST1H2BCP62807 126 aa15.42■□□□□ 0.06
CBX4-202ENST00000448310 HIST2H2BEQ16778 126 aa15.42■□□□□ 0.06
CBX4-202ENST00000448310 Q1RN00 199 aa15.42■□□□□ 0.06
CBX4-202ENST00000448310 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.42■□□□□ 0.06
CBX4-202ENST00000448310 DEFB105AQ8NG35 78 aa15.42■□□□□ 0.06
CBX4-202ENST00000448310 HIST1H2BHQ93079 126 aa15.42■□□□□ 0.06
CBX4-202ENST00000448310 HIST1H2BNQ99877 126 aa15.42■□□□□ 0.06
CBX4-202ENST00000448310 HIST1H2BMQ99879 126 aa15.42■□□□□ 0.06
CBX4-202ENST00000448310 PCOTHQ58A44 107 aa15.41■□□□□ 0.06
CBX4-202ENST00000448310 LCE2DQ5TA82 110 aaPredicted RBP15.41■□□□□ 0.06
CBX4-202ENST00000448310 TAL2Q16559 108 aa15.39■□□□□ 0.05
CBX4-202ENST00000448310 PET117Q6UWS5 81 aa15.39■□□□□ 0.05
CBX4-202ENST00000448310 KRTAP19-2Q3LHN2 52 aa15.38■□□□□ 0.05
CBX4-202ENST00000448310 LINC00518Q8N0U6 118 aa15.38■□□□□ 0.05
CBX4-202ENST00000448310 IGLV8-61A0A075B6I0 122 aa15.36■□□□□ 0.05
CBX4-202ENST00000448310 H7C2G1 150 aa15.35■□□□□ 0.05
CBX4-202ENST00000448310 FSIP2Q5CZC0 6907 aa15.34■□□□□ 0.05
CBX4-202ENST00000448310 C3orf79P0CE67 100 aa15.33■□□□□ 0.04
CBX4-202ENST00000448310 PRO1933Q9H354 126 aa15.33■□□□□ 0.04
CBX4-202ENST00000448310 TEX49A0A1B0GTD5 131 aa15.32■□□□□ 0.04
CBX4-202ENST00000448310 CD164Q04900 197 aa15.32■□□□□ 0.04
CBX4-202ENST00000448310 SMIM29Q86T20 159 aa15.3■□□□□ 0.04
CBX4-202ENST00000448310 SCGB1D4Q6XE38 83 aa15.29■□□□□ 0.04
CBX4-202ENST00000448310 A0A0G2JQZ4 141 aa15.28■□□□□ 0.04
CBX4-202ENST00000448310 MT1HP80294 61 aa15.28■□□□□ 0.04
CBX4-202ENST00000448310 TRBV7-6A0A0J9YX20 115 aa15.27■□□□□ 0.04
CBX4-202ENST00000448310 KRTDAPP60985 99 aa15.27■□□□□ 0.04
CBX4-202ENST00000448310 A0A1B0GWB2 263 aa15.24■□□□□ 0.03
CBX4-202ENST00000448310 A6NDN8 102 aa15.24■□□□□ 0.03
CBX4-202ENST00000448310 AKR1D1P51857 326 aa15.24■□□□□ 0.03
CBX4-202ENST00000448310 ANKRD39Q53RE8 183 aa15.24■□□□□ 0.03
CBX4-202ENST00000448310 IGLV5-48A0A075B6I7 105 aa15.22■□□□□ 0.03
CBX4-202ENST00000448310 C1orf195Q5TG92 126 aa15.22■□□□□ 0.03
CBX4-202ENST00000448310 Q5XG85 94 aa15.21■□□□□ 0.03
CBX4-202ENST00000448310 IFITM1P13164 125 aa15.19■□□□□ 0.02
CBX4-202ENST00000448310 MUSTN1Q8IVN3 82 aa15.19■□□□□ 0.02
CBX4-202ENST00000448310 COPS9Q8WXC6 57 aa15.19■□□□□ 0.02
CBX4-202ENST00000448310 CRCT1Q9UGL9 99 aa15.19■□□□□ 0.02
CBX4-202ENST00000448310 ATOH7Q8N100 152 aa15.18■□□□□ 0.02
CBX4-202ENST00000448310 COA6Q5JTJ3 125 aaKnown RBP15.15■□□□□ 0.02
CBX4-202ENST00000448310 PCP2Q8IVA1 136 aa15.15■□□□□ 0.02
CBX4-202ENST00000448310 C20orf202A1L168 122 aa15.14■□□□□ 0.01
CBX4-202ENST00000448310 Q6ZVH6 145 aa15.13■□□□□ 0.01
CBX4-202ENST00000448310 SMIM11BQ8TCY0 68 aa15.12■□□□□ 0.01
CBX4-202ENST00000448310 CFC1BP0CG36 223 aa15.11■□□□□ 0.01
CBX4-202ENST00000448310 A4D1N5 150 aa15.1■□□□□ 0.01
CBX4-202ENST00000448310 RPL37P61927 97 aaKnown RBP15.1■□□□□ 0.01
CBX4-202ENST00000448310 NHP2Q9NX24 153 aaKnown RBP15.08■□□□□ 0
CBX4-202ENST00000448310 TRAV13-2A0A0B4J235 113 aa15.07■□□□□ 0
CBX4-202ENST00000448310 TCL1BO95988 128 aa15.03■□□□□ -0
CBX4-202ENST00000448310 LORP23490 312 aaPredicted RBP15.03■□□□□ -0
CBX4-202ENST00000448310 KRTAP10-6P60371 365 aaPredicted RBP15.03■□□□□ -0
CBX4-202ENST00000448310 F8WEM9 126 aa14.99□□□□□ -0.01
CBX4-202ENST00000448310 FLGP20930 4061 aaPredicted RBP14.98□□□□□ -0.01
CBX4-202ENST00000448310 M0R2T5 61 aa14.97□□□□□ -0.01
CBX4-202ENST00000448310 COX6B2Q6YFQ2 88 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms