RNA–Protein interactions for RNA: ENST00000446182.5

PTPRN-208, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 5

Gene PTPRN, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-208ENST00000446182 FAM19A1Q7Z5A9 133 aa6.01□□□□□ -1.45
PTPRN-208ENST00000446182 PCP2Q8IVA1 136 aa6.01□□□□□ -1.45
PTPRN-208ENST00000446182 TMEM126AQ9H061 195 aa6.01□□□□□ -1.45
PTPRN-208ENST00000446182 TMEM238C9JI98 176 aa6□□□□□ -1.45
PTPRN-208ENST00000446182 SMIM13P0DJ93 91 aa6□□□□□ -1.45
PTPRN-208ENST00000446182 Q6ZVH6 145 aa6□□□□□ -1.45
PTPRN-208ENST00000446182 GTF2H5Q6ZYL4 71 aa6□□□□□ -1.45
PTPRN-208ENST00000446182 C3orf22Q8N5N4 141 aa6□□□□□ -1.45
PTPRN-208ENST00000446182 COPS9Q8WXC6 57 aa6□□□□□ -1.45
PTPRN-208ENST00000446182 PPDPFQ9H3Y8 114 aa6□□□□□ -1.45
PTPRN-208ENST00000446182 M0R378 163 aa5.99□□□□□ -1.45
PTPRN-208ENST00000446182 LEPROTO15243 131 aa5.99□□□□□ -1.45
PTPRN-208ENST00000446182 LGALS3P17931 250 aaKnown RBP5.99□□□□□ -1.45
PTPRN-208ENST00000446182 PFN2P35080 140 aa5.99□□□□□ -1.45
PTPRN-208ENST00000446182 TMEM170BQ5T4T1 132 aa5.99□□□□□ -1.45
PTPRN-208ENST00000446182 SCGB1D4Q6XE38 83 aa5.99□□□□□ -1.45
PTPRN-208ENST00000446182 CEND1Q8N111 149 aa5.99□□□□□ -1.45
PTPRN-208ENST00000446182 SPANXB1Q9NS25 103 aaPredicted RBP5.99□□□□□ -1.45
PTPRN-208ENST00000446182 TMEM223A0PJW6 202 aa5.98□□□□□ -1.45
PTPRN-208ENST00000446182 ZNF815PA8K554 130 aa5.98□□□□□ -1.45
PTPRN-208ENST00000446182 UBE2V1Q13404 147 aa5.98□□□□□ -1.45
PTPRN-208ENST00000446182 LYRM7Q5U5X0 104 aa5.98□□□□□ -1.45
PTPRN-208ENST00000446182 SFTA2Q6UW10 78 aa5.98□□□□□ -1.45
PTPRN-208ENST00000446182 Q8NDZ9 215 aa5.98□□□□□ -1.45
PTPRN-208ENST00000446182 HIST1H4GQ99525 98 aa5.98□□□□□ -1.45
PTPRN-208ENST00000446182 TTTY13Q9BZ97 58 aa5.98□□□□□ -1.45
PTPRN-208ENST00000446182 SND1-IT1Q9HBX3 110 aa5.98□□□□□ -1.45
PTPRN-208ENST00000446182 IGLV5-39A0A0G2JS06 123 aa5.97□□□□□ -1.45
PTPRN-208ENST00000446182 C9orf118A6NHY6 69 aa5.97□□□□□ -1.45
PTPRN-208ENST00000446182 J3QQQ9 107 aa5.97□□□□□ -1.45
PTPRN-208ENST00000446182 TAX1BP3O14907 124 aa5.97□□□□□ -1.45
PTPRN-208ENST00000446182 A0A1B0GWB2 263 aa5.96□□□□□ -1.46
PTPRN-208ENST00000446182 RPL24P83731 157 aaKnown RBP5.96□□□□□ -1.46
PTPRN-208ENST00000446182 VAMP3Q15836 100 aa5.96□□□□□ -1.46
PTPRN-208ENST00000446182 SPAG11AQ6PDA7 123 aa5.96□□□□□ -1.46
PTPRN-208ENST00000446182 FP248Q71RG6 208 aaPredicted RBP5.96□□□□□ -1.46
PTPRN-208ENST00000446182 ERG28Q9UKR5 140 aa5.96□□□□□ -1.46
PTPRN-208ENST00000446182 A0A0J9YXY3 114 aa5.95□□□□□ -1.46
PTPRN-208ENST00000446182 TIMM17BO60830 172 aa5.95□□□□□ -1.46
PTPRN-208ENST00000446182 FABP2P12104 132 aa5.95□□□□□ -1.46
PTPRN-208ENST00000446182 ZNF22P17026 224 aaPredicted RBP5.95□□□□□ -1.46
PTPRN-208ENST00000446182 SPRR4Q96PI1 79 aa5.95□□□□□ -1.46
PTPRN-208ENST00000446182 HIGD2AQ9BW72 106 aa5.95□□□□□ -1.46
PTPRN-208ENST00000446182 COX17Q14061 63 aa5.94□□□□□ -1.46
PTPRN-208ENST00000446182 KRTAP13-3Q3SY46 172 aa5.94□□□□□ -1.46
PTPRN-208ENST00000446182 IFITM1P13164 125 aa5.93□□□□□ -1.46
PTPRN-208ENST00000446182 HERV-K104P63124 156 aa5.93□□□□□ -1.46
PTPRN-208ENST00000446182 ASB16-AS1Q495Z4 193 aa5.93□□□□□ -1.46
PTPRN-208ENST00000446182 ZNF625Q96I27 306 aaPredicted RBP5.93□□□□□ -1.46
PTPRN-208ENST00000446182 A0A1W2PPM0 123 aa5.92□□□□□ -1.46
PTPRN-208ENST00000446182 TSPEAR-AS2P59090 65 aa5.92□□□□□ -1.46
PTPRN-208ENST00000446182 LINC00337Q8N6G1 96 aa5.92□□□□□ -1.46
PTPRN-208ENST00000446182 KRTAP4-1Q9BYQ7 146 aa5.92□□□□□ -1.46
PTPRN-208ENST00000446182 C4orf48Q5BLP8 95 aa5.91□□□□□ -1.46
PTPRN-208ENST00000446182 DAND5Q8N907 189 aa5.91□□□□□ -1.46
PTPRN-208ENST00000446182 Q8NBF4 154 aa5.91□□□□□ -1.46
PTPRN-208ENST00000446182 NHP2Q9NX24 153 aaKnown RBP5.91□□□□□ -1.46
PTPRN-208ENST00000446182 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.9□□□□□ -1.46
PTPRN-208ENST00000446182 K7EP34 96 aa5.9□□□□□ -1.46
PTPRN-208ENST00000446182 FXYD2P54710 66 aa5.9□□□□□ -1.46
PTPRN-208ENST00000446182 LINC01547P58512 204 aaPredicted RBP5.9□□□□□ -1.46
PTPRN-208ENST00000446182 SPANXDQ9BXN6 97 aa5.9□□□□□ -1.46
PTPRN-208ENST00000446182 SPANXCQ9NY87 97 aa5.9□□□□□ -1.46
PTPRN-208ENST00000446182 ZNF706Q9Y5V0 76 aaPredicted RBP5.9□□□□□ -1.46
PTPRN-208ENST00000446182 TRBV20-1A0A075B6N2 111 aa5.89□□□□□ -1.47
PTPRN-208ENST00000446182 A0A0B4J2C4 111 aa5.89□□□□□ -1.47
PTPRN-208ENST00000446182 H3BUT2 72 aa5.89□□□□□ -1.47
PTPRN-208ENST00000446182 NDUFA12Q9UI09 145 aa5.89□□□□□ -1.47
PTPRN-208ENST00000446182 PRYO14603 147 aa5.88□□□□□ -1.47
PTPRN-208ENST00000446182 SPINK1P00995 79 aa5.88□□□□□ -1.47
PTPRN-208ENST00000446182 LINC00158P58513 81 aa5.88□□□□□ -1.47
PTPRN-208ENST00000446182 SEC61BP60468 96 aaKnown RBP5.88□□□□□ -1.47
PTPRN-208ENST00000446182 SPCS1Q9Y6A9 102 aa5.88□□□□□ -1.47
PTPRN-208ENST00000446182 F8W1H4 67 aa5.87□□□□□ -1.47
PTPRN-208ENST00000446182 SPRR1AP35321 89 aa5.87□□□□□ -1.47
PTPRN-208ENST00000446182 SMCR5Q8TEV8 140 aa5.87□□□□□ -1.47
PTPRN-208ENST00000446182 PRO1854Q9UHT4 67 aa5.87□□□□□ -1.47
PTPRN-208ENST00000446182 A0A0U1RRA0 63 aa5.86□□□□□ -1.47
PTPRN-208ENST00000446182 LINC00483Q53H64 154 aa5.86□□□□□ -1.47
PTPRN-208ENST00000446182 RAB37Q96AX2 223 aa5.86□□□□□ -1.47
PTPRN-208ENST00000446182 KRTAP4-16G5E9R7 235 aaPredicted RBP5.85□□□□□ -1.47
PTPRN-208ENST00000446182 K7ERU9 68 aa5.85□□□□□ -1.47
PTPRN-208ENST00000446182 COX6CP09669 75 aa5.85□□□□□ -1.47
PTPRN-208ENST00000446182 KCNQ1DNQ9H478 68 aa5.85□□□□□ -1.47
PTPRN-208ENST00000446182 J3QR89 54 aa5.84□□□□□ -1.47
PTPRN-208ENST00000446182 NCR3O14931 201 aa5.84□□□□□ -1.47
PTPRN-208ENST00000446182 Q8N377 158 aa5.84□□□□□ -1.47
PTPRN-208ENST00000446182 ETDCA0A1B0GVM5 59 aa5.83□□□□□ -1.48
PTPRN-208ENST00000446182 RPS29P62273 56 aaKnown RBP5.83□□□□□ -1.48
PTPRN-208ENST00000446182 MOBPQ13875 183 aa5.83□□□□□ -1.48
PTPRN-208ENST00000446182 TRBV10-3A0A0K0K1G6 114 aa5.82□□□□□ -1.48
PTPRN-208ENST00000446182 A4D1N5 150 aa5.82□□□□□ -1.48
PTPRN-208ENST00000446182 K7ERJ3 54 aa5.82□□□□□ -1.48
PTPRN-208ENST00000446182 CFC1BP0CG36 223 aa5.82□□□□□ -1.48
PTPRN-208ENST00000446182 CFC1P0CG37 223 aa5.82□□□□□ -1.48
PTPRN-208ENST00000446182 XP32Q5T750 250 aa5.82□□□□□ -1.48
PTPRN-208ENST00000446182 GAGE2AQ6NT46 116 aa5.82□□□□□ -1.48
PTPRN-208ENST00000446182 MUSTN1Q8IVN3 82 aa5.82□□□□□ -1.48
PTPRN-208ENST00000446182 MIR7-3HGQ8N6C7 128 aa5.82□□□□□ -1.48
PTPRN-208ENST00000446182 LITAFQ99732 161 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms