RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 C15orf56Q8N910 161 aa9.37□□□□□ -0.91
ERCC3-203ENST00000445889 SERP1Q9Y6X1 66 aa9.36□□□□□ -0.91
ERCC3-203ENST00000445889 NREPQ16612 68 aa9.36□□□□□ -0.91
ERCC3-203ENST00000445889 ESRGQ1W209 222 aa9.36□□□□□ -0.91
ERCC3-203ENST00000445889 STAB1Q9NY15 2570 aa9.36□□□□□ -0.91
ERCC3-203ENST00000445889 RPL37AP8A6NKH3 93 aa9.35□□□□□ -0.91
ERCC3-203ENST00000445889 M0R378 163 aa9.35□□□□□ -0.91
ERCC3-203ENST00000445889 LINC00528Q8N1L1 170 aa9.35□□□□□ -0.91
ERCC3-203ENST00000445889 KRTAP26-1Q6PEX3 210 aa9.35□□□□□ -0.91
ERCC3-203ENST00000445889 BCE1O60756 84 aa9.34□□□□□ -0.91
ERCC3-203ENST00000445889 H3BQ85 93 aa9.34□□□□□ -0.91
ERCC3-203ENST00000445889 SERTAD4-AS1Q5TG53 156 aa9.34□□□□□ -0.91
ERCC3-203ENST00000445889 LINC00474Q9P2X8 69 aa9.33□□□□□ -0.92
ERCC3-203ENST00000445889 CSMD3Q7Z407 3707 aa9.33□□□□□ -0.92
ERCC3-203ENST00000445889 EGFEM1PQ0D2K5 195 aa9.32□□□□□ -0.92
ERCC3-203ENST00000445889 TRBV7-6A0A0J9YX20 115 aa9.32□□□□□ -0.92
ERCC3-203ENST00000445889 FAM168BA1KXE4 195 aa9.32□□□□□ -0.92
ERCC3-203ENST00000445889 TMEM254Q8TBM7 123 aa9.32□□□□□ -0.92
ERCC3-203ENST00000445889 C1orf43Q9BWL3 253 aa9.32□□□□□ -0.92
ERCC3-203ENST00000445889 J3QKU1 62 aa9.3□□□□□ -0.92
ERCC3-203ENST00000445889 IGKV4-1P06312 121 aa9.3□□□□□ -0.92
ERCC3-203ENST00000445889 LINC00336Q6ZUF6 198 aa9.3□□□□□ -0.92
ERCC3-203ENST00000445889 FP248Q71RG6 208 aaPredicted RBP9.3□□□□□ -0.92
ERCC3-203ENST00000445889 NKAPP1Q8N9T2 125 aa9.28□□□□□ -0.92
ERCC3-203ENST00000445889 EPM2AB3EWF7 344 aa9.28□□□□□ -0.92
ERCC3-203ENST00000445889 Q8N377 158 aa9.28□□□□□ -0.92
ERCC3-203ENST00000445889 ST20-AS1Q8NBB2 130 aa9.28□□□□□ -0.92
ERCC3-203ENST00000445889 C7orf33Q8WU49 177 aa9.28□□□□□ -0.92
ERCC3-203ENST00000445889 A0A0G2JQZ4 141 aa9.28□□□□□ -0.92
ERCC3-203ENST00000445889 A0A1W2PNN7 141 aa9.28□□□□□ -0.92
ERCC3-203ENST00000445889 SYCNQ0VAF6 134 aa9.28□□□□□ -0.92
ERCC3-203ENST00000445889 KRTAP10-11P60412 298 aa9.27□□□□□ -0.93
ERCC3-203ENST00000445889 CASC10Q5T4H9 136 aa9.27□□□□□ -0.93
ERCC3-203ENST00000445889 COL6A5A8TX70 2615 aa9.27□□□□□ -0.93
ERCC3-203ENST00000445889 WIPF1O43516 503 aa9.25□□□□□ -0.93
ERCC3-203ENST00000445889 HIGD2AQ9BW72 106 aa9.25□□□□□ -0.93
ERCC3-203ENST00000445889 SMIM26A0A096LP01 95 aa9.25□□□□□ -0.93
ERCC3-203ENST00000445889 MPLKIPQ8TAP9 179 aa9.25□□□□□ -0.93
ERCC3-203ENST00000445889 FAM30AQ9NZY2 134 aa9.24□□□□□ -0.93
ERCC3-203ENST00000445889 SRRM2Q9UQ35 2752 aaKnown RBP9.24□□□□□ -0.93
ERCC3-203ENST00000445889 FAM229BQ4G0N7 80 aa9.24□□□□□ -0.93
ERCC3-203ENST00000445889 NDUFC1O43677 76 aa9.23□□□□□ -0.93
ERCC3-203ENST00000445889 OCR1Q9BZK8 76 aa9.23□□□□□ -0.93
ERCC3-203ENST00000445889 DEFB131BA0A096LNP1 70 aa9.23□□□□□ -0.93
ERCC3-203ENST00000445889 KMT2BQ9UMN6 2715 aaPredicted RBP9.23□□□□□ -0.93
ERCC3-203ENST00000445889 Q9BRP9 147 aa9.22□□□□□ -0.93
ERCC3-203ENST00000445889 SMIM29Q86T20 159 aa9.21□□□□□ -0.93
ERCC3-203ENST00000445889 ERC2-IT1O76042 136 aa9.21□□□□□ -0.93
ERCC3-203ENST00000445889 PRB2P02812 416 aaPredicted RBP9.21□□□□□ -0.93
ERCC3-203ENST00000445889 PRYO14603 147 aa9.21□□□□□ -0.94
ERCC3-203ENST00000445889 NBEAL1Q6ZS30 2694 aa9.2□□□□□ -0.94
ERCC3-203ENST00000445889 A0A1W2PNM2 257 aa9.2□□□□□ -0.94
ERCC3-203ENST00000445889 KCNQ1DNQ9H478 68 aa9.2□□□□□ -0.94
ERCC3-203ENST00000445889 DEFB116Q30KQ4 102 aa9.19□□□□□ -0.94
ERCC3-203ENST00000445889 FUSP35637 526 aaKnown RBP eCLIP9.19□□□□□ -0.94
ERCC3-203ENST00000445889 A0A0U1RQV1 116 aa9.18□□□□□ -0.94
ERCC3-203ENST00000445889 LRCOL1A6NCL2 159 aa9.18□□□□□ -0.94
ERCC3-203ENST00000445889 C1orf137Q5JT78 98 aa9.18□□□□□ -0.94
ERCC3-203ENST00000445889 KRTAP7-1Q8IUC3 87 aa9.18□□□□□ -0.94
ERCC3-203ENST00000445889 C11orf45Q8TAV5 145 aa9.18□□□□□ -0.94
ERCC3-203ENST00000445889 IGLV5-48A0A075B6I7 105 aa9.16□□□□□ -0.94
ERCC3-203ENST00000445889 ETDCA0A1B0GVM5 59 aa9.16□□□□□ -0.94
ERCC3-203ENST00000445889 LINC01556Q5JQF7 62 aa9.16□□□□□ -0.94
ERCC3-203ENST00000445889 Q6ZRX8 168 aa9.16□□□□□ -0.94
ERCC3-203ENST00000445889 LYSTQ99698 3801 aa9.16□□□□□ -0.94
ERCC3-203ENST00000445889 UBE2BP63146 152 aa9.15□□□□□ -0.94
ERCC3-203ENST00000445889 BRK1Q8WUW1 75 aa9.15□□□□□ -0.94
ERCC3-203ENST00000445889 PRO0628Q9UI54 55 aa9.15□□□□□ -0.94
ERCC3-203ENST00000445889 PKIGQ9Y2B9 76 aa9.14□□□□□ -0.95
ERCC3-203ENST00000445889 DNAH10Q8IVF4 4471 aa9.14□□□□□ -0.95
ERCC3-203ENST00000445889 H3BNG1 76 aa9.13□□□□□ -0.95
ERCC3-203ENST00000445889 ATP5EP56381 51 aaPredicted RBP9.13□□□□□ -0.95
ERCC3-203ENST00000445889 PRR4Q16378 134 aa9.13□□□□□ -0.95
ERCC3-203ENST00000445889 IGLV1-50A0A075B6I6 118 aa9.12□□□□□ -0.95
ERCC3-203ENST00000445889 MRAPQ8TCY5 172 aa9.12□□□□□ -0.95
ERCC3-203ENST00000445889 K7EQZ3 153 aa9.12□□□□□ -0.95
ERCC3-203ENST00000445889 DHRS4-AS1Q9P1J3 65 aa9.12□□□□□ -0.95
ERCC3-203ENST00000445889 LINC00588Q9Y4M8 146 aa9.11□□□□□ -0.95
ERCC3-203ENST00000445889 KRTAP4-16G5E9R7 235 aaPredicted RBP9.11□□□□□ -0.95
ERCC3-203ENST00000445889 IGKV2-24A0A0C4DH68 120 aa9.1□□□□□ -0.95
ERCC3-203ENST00000445889 Q8NBF4 154 aa9.1□□□□□ -0.95
ERCC3-203ENST00000445889 TENM2Q9NT68 2774 aa9.1□□□□□ -0.95
ERCC3-203ENST00000445889 COL7A1Q02388 2944 aa9.1□□□□□ -0.95
ERCC3-203ENST00000445889 DSCR10P59022 87 aa9.09□□□□□ -0.95
ERCC3-203ENST00000445889 PRLHP81277 87 aa9.08□□□□□ -0.96
ERCC3-203ENST00000445889 TNP2Q05952 138 aa9.08□□□□□ -0.96
ERCC3-203ENST00000445889 MRPL55Q7Z7F7 128 aaKnown RBP9.08□□□□□ -0.96
ERCC3-203ENST00000445889 DNAH10OSP0CZ25 163 aa9.07□□□□□ -0.96
ERCC3-203ENST00000445889 MGAM2Q2M2H8 2515 aa9.05□□□□□ -0.96
ERCC3-203ENST00000445889 WFDC13Q8IUB5 93 aa9.04□□□□□ -0.96
ERCC3-203ENST00000445889 LINC00476Q8WZB0 136 aa9.04□□□□□ -0.96
ERCC3-203ENST00000445889 CMYA5Q8N3K9 4069 aa9.04□□□□□ -0.96
ERCC3-203ENST00000445889 SPRR1AP35321 89 aa9.04□□□□□ -0.96
ERCC3-203ENST00000445889 RPL37AP61513 92 aaKnown RBP9.04□□□□□ -0.96
ERCC3-203ENST00000445889 TLX1NBP0CAT3 122 aa9.03□□□□□ -0.96
ERCC3-203ENST00000445889 SPRR4Q96PI1 79 aa9.03□□□□□ -0.96
ERCC3-203ENST00000445889 STAB2Q8WWQ8 2551 aa9.02□□□□□ -0.96
ERCC3-203ENST00000445889 F8WDY8 70 aa9.02□□□□□ -0.96
ERCC3-203ENST00000445889 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.02□□□□□ -0.97
ERCC3-203ENST00000445889 PSCAO43653 123 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms