RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 GAGE2BQ13066 116 aa8.89□□□□□ -0.99
RBM39-216ENST00000444878 Q6ZQY7 126 aa8.89□□□□□ -0.99
RBM39-216ENST00000444878 DYNC2H1Q8NCM8 4307 aaKnown RBP8.88□□□□□ -0.99
RBM39-216ENST00000444878 CSMD3Q7Z407 3707 aa8.88□□□□□ -0.99
RBM39-216ENST00000444878 PSCAO43653 123 aa8.87□□□□□ -0.99
RBM39-216ENST00000444878 PLA2G2DQ9UNK4 145 aa8.87□□□□□ -0.99
RBM39-216ENST00000444878 DNAH10Q8IVF4 4471 aa8.87□□□□□ -0.99
RBM39-216ENST00000444878 NUPR2A6NF83 97 aa8.87□□□□□ -0.99
RBM39-216ENST00000444878 SMCR5Q8TEV8 140 aa8.86□□□□□ -0.99
RBM39-216ENST00000444878 C7orf33Q8WU49 177 aa8.86□□□□□ -0.99
RBM39-216ENST00000444878 H3BQ85 93 aa8.86□□□□□ -0.99
RBM39-216ENST00000444878 LOC107984640A0A0U1RRK4 108 aa8.85□□□□□ -0.99
RBM39-216ENST00000444878 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.85□□□□□ -0.99
RBM39-216ENST00000444878 SDIM1Q6ZPB5 146 aa8.85□□□□□ -0.99
RBM39-216ENST00000444878 LINC00643Q86TS7 51 aa8.85□□□□□ -0.99
RBM39-216ENST00000444878 LAMTOR3Q9UHA4 124 aa8.85□□□□□ -0.99
RBM39-216ENST00000444878 PLECQ15149 4684 aaKnown RBP8.85□□□□□ -0.99
RBM39-216ENST00000444878 FAM168BA1KXE4 195 aa8.84□□□□□ -0.99
RBM39-216ENST00000444878 Q6Q795 121 aa8.84□□□□□ -0.99
RBM39-216ENST00000444878 KCNQ1DNQ9H478 68 aa8.84□□□□□ -0.99
RBM39-216ENST00000444878 CCKP06307 115 aa8.84□□□□□ -0.99
RBM39-216ENST00000444878 PLA2G1BP04054 148 aaKnown RBP8.83□□□□□ -1
RBM39-216ENST00000444878 RBM3P98179 157 aaKnown RBP8.83□□□□□ -1
RBM39-216ENST00000444878 PRKDCP78527 4128 aaKnown RBP8.82□□□□□ -1
RBM39-216ENST00000444878 DNAH7Q8WXX0 4024 aa8.82□□□□□ -1
RBM39-216ENST00000444878 IGLV5-37A0A075B6J1 123 aa8.82□□□□□ -1
RBM39-216ENST00000444878 TRBV7-7A0A0K0K1E9 115 aa8.81□□□□□ -1
RBM39-216ENST00000444878 RPL37AP8A6NKH3 93 aa8.81□□□□□ -1
RBM39-216ENST00000444878 LINC00846Q9NV44 126 aa8.81□□□□□ -1
RBM39-216ENST00000444878 CNBPP62633 177 aaKnown RBP8.8□□□□□ -1
RBM39-216ENST00000444878 C14orf177Q52M58 125 aa8.8□□□□□ -1
RBM39-216ENST00000444878 IGLV1-50A0A075B6I6 118 aa8.79□□□□□ -1
RBM39-216ENST00000444878 NBDYA0A0U1RRE5 68 aa8.79□□□□□ -1
RBM39-216ENST00000444878 KRTAP7-1Q8IUC3 87 aa8.79□□□□□ -1
RBM39-216ENST00000444878 FAM236DA0A1B0GTK5 79 aa8.78□□□□□ -1
RBM39-216ENST00000444878 J3KT08 172 aa8.78□□□□□ -1
RBM39-216ENST00000444878 FAM236CP0DP71 79 aa8.78□□□□□ -1
RBM39-216ENST00000444878 MRPL55Q7Z7F7 128 aaKnown RBP8.78□□□□□ -1
RBM39-216ENST00000444878 IMUPQ9GZP8 106 aa8.78□□□□□ -1
RBM39-216ENST00000444878 DSCR8Q96T75 97 aa8.78□□□□□ -1
RBM39-216ENST00000444878 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.77□□□□□ -1.01
RBM39-216ENST00000444878 CCDC179H3BU77 68 aa8.77□□□□□ -1.01
RBM39-216ENST00000444878 DNHD1Q96M86 4753 aa8.77□□□□□ -1.01
RBM39-216ENST00000444878 NDUFV3P56181 108 aaKnown RBP8.77□□□□□ -1.01
RBM39-216ENST00000444878 Q6ZQT0 140 aa8.77□□□□□ -1.01
RBM39-216ENST00000444878 LOC110117498A0A087WWA1 95 aa8.76□□□□□ -1.01
RBM39-216ENST00000444878 C16orf90A8MZG2 172 aa8.76□□□□□ -1.01
RBM39-216ENST00000444878 STARD9Q9P2P6 4700 aa8.76□□□□□ -1.01
RBM39-216ENST00000444878 A0A096LNI7 61 aa8.75□□□□□ -1.01
RBM39-216ENST00000444878 IGKV2-24A0A0C4DH68 120 aa8.75□□□□□ -1.01
RBM39-216ENST00000444878 ETDCA0A1B0GVM5 59 aa8.75□□□□□ -1.01
RBM39-216ENST00000444878 Q6ZRX8 168 aa8.75□□□□□ -1.01
RBM39-216ENST00000444878 MEGF8Q7Z7M0 2845 aa8.75□□□□□ -1.01
RBM39-216ENST00000444878 KRTAP4-16G5E9R7 235 aaPredicted RBP8.74□□□□□ -1.01
RBM39-216ENST00000444878 PDE6GP18545 87 aa8.74□□□□□ -1.01
RBM39-216ENST00000444878 SPRR1AP35321 89 aa8.74□□□□□ -1.01
RBM39-216ENST00000444878 RPS28P62857 69 aaKnown RBP8.74□□□□□ -1.01
RBM39-216ENST00000444878 DHRS4-AS1Q9P1J3 65 aa8.74□□□□□ -1.01
RBM39-216ENST00000444878 Q6JHZ5 121 aa8.72□□□□□ -1.01
RBM39-216ENST00000444878 LRCOL1A6NCL2 159 aa8.72□□□□□ -1.01
RBM39-216ENST00000444878 IGKV3D-7A0A0C4DH55 119 aa8.71□□□□□ -1.01
RBM39-216ENST00000444878 VPS13DQ5THJ4 4388 aa8.71□□□□□ -1.01
RBM39-216ENST00000444878 TRBV7-4A0A0J9YYF1 115 aa8.71□□□□□ -1.02
RBM39-216ENST00000444878 M0R2N4 97 aa8.71□□□□□ -1.02
RBM39-216ENST00000444878 REG3GQ6UW15 175 aa8.71□□□□□ -1.02
RBM39-216ENST00000444878 DEFB105AQ8NG35 78 aa8.71□□□□□ -1.02
RBM39-216ENST00000444878 Q9BRP9 147 aa8.71□□□□□ -1.02
RBM39-216ENST00000444878 UBL5Q9BZL1 73 aa8.71□□□□□ -1.02
RBM39-216ENST00000444878 A0A1W2PNN7 141 aa8.7□□□□□ -1.02
RBM39-216ENST00000444878 Q6ZRN7 208 aaPredicted RBP8.7□□□□□ -1.02
RBM39-216ENST00000444878 FAM236AA0A1B0GUQ0 79 aa8.69□□□□□ -1.02
RBM39-216ENST00000444878 FAM236BA0A1B0GV22 79 aa8.69□□□□□ -1.02
RBM39-216ENST00000444878 PMAIP1Q13794 54 aa8.69□□□□□ -1.02
RBM39-216ENST00000444878 C9orf163Q8N9P6 203 aa8.69□□□□□ -1.02
RBM39-216ENST00000444878 Q75L30 129 aa8.68□□□□□ -1.02
RBM39-216ENST00000444878 Q8N377 158 aa8.68□□□□□ -1.02
RBM39-216ENST00000444878 UBE2BP63146 152 aa8.68□□□□□ -1.02
RBM39-216ENST00000444878 CHTF8P0CG12 524 aa8.67□□□□□ -1.02
RBM39-216ENST00000444878 LINC01547P58512 204 aaPredicted RBP8.66□□□□□ -1.02
RBM39-216ENST00000444878 ATP5EP2Q5VTU8 51 aa8.66□□□□□ -1.02
RBM39-216ENST00000444878 ST20-AS1Q8NBB2 130 aa8.65□□□□□ -1.03
RBM39-216ENST00000444878 ERC2-IT1O76042 136 aa8.63□□□□□ -1.03
RBM39-216ENST00000444878 IGLV5-48A0A075B6I7 105 aa8.63□□□□□ -1.03
RBM39-216ENST00000444878 HRCT1Q6UXD1 115 aa8.63□□□□□ -1.03
RBM39-216ENST00000444878 LINC00474Q9P2X8 69 aa8.63□□□□□ -1.03
RBM39-216ENST00000444878 TGP01266 2768 aa8.62□□□□□ -1.03
RBM39-216ENST00000444878 HIST1H4AP62805 103 aaKnown RBP8.62□□□□□ -1.03
RBM39-216ENST00000444878 Q6ZVQ6 151 aa8.62□□□□□ -1.03
RBM39-216ENST00000444878 PHF5AQ7RTV0 110 aaKnown RBP8.62□□□□□ -1.03
RBM39-216ENST00000444878 C3orf22Q8N5N4 141 aa8.62□□□□□ -1.03
RBM39-216ENST00000444878 A0A087WVE0 104 aa8.6□□□□□ -1.03
RBM39-216ENST00000444878 PRLHP81277 87 aa8.6□□□□□ -1.03
RBM39-216ENST00000444878 A0A087WTM6 91 aa8.6□□□□□ -1.03
RBM39-216ENST00000444878 HAMPP81172 84 aa8.6□□□□□ -1.03
RBM39-216ENST00000444878 DPH3Q96FX2 82 aa8.6□□□□□ -1.03
RBM39-216ENST00000444878 KMT2AQ03164 3969 aa8.6□□□□□ -1.03
RBM39-216ENST00000444878 Q6ZR54 194 aa8.59□□□□□ -1.03
RBM39-216ENST00000444878 HIGD2AQ9BW72 106 aa8.58□□□□□ -1.04
RBM39-216ENST00000444878 PANO1I0J062 215 aa8.57□□□□□ -1.04
RBM39-216ENST00000444878 KRTAP11-1Q8IUC1 163 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms