RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 ICOSQ9Y6W8 199 aa6.88□□□□□ -1.31
SYNE2-206ENST00000441438 HIGD2BQ4VC39 106 aa6.87□□□□□ -1.31
SYNE2-206ENST00000441438 ODF3BA8MYP8 253 aa6.86□□□□□ -1.31
SYNE2-206ENST00000441438 MAPK1IP1LQ8NDC0 245 aa6.86□□□□□ -1.31
SYNE2-206ENST00000441438 PROK1P58294 105 aa6.85□□□□□ -1.31
SYNE2-206ENST00000441438 H7C2G1 150 aa6.85□□□□□ -1.31
SYNE2-206ENST00000441438 POLR2KP53803 58 aaKnown RBP6.84□□□□□ -1.31
SYNE2-206ENST00000441438 RPL39LQ96EH5 51 aaKnown RBP6.84□□□□□ -1.31
SYNE2-206ENST00000441438 ZNF469Q96JG9 3925 aaPredicted RBP6.84□□□□□ -1.31
SYNE2-206ENST00000441438 M0R1W7 72 aa6.84□□□□□ -1.31
SYNE2-206ENST00000441438 KRTAP1-1Q07627 177 aa6.83□□□□□ -1.32
SYNE2-206ENST00000441438 C22orf24Q9Y442 160 aa6.83□□□□□ -1.32
SYNE2-206ENST00000441438 A0A1W2PNM2 257 aa6.83□□□□□ -1.32
SYNE2-206ENST00000441438 ENHOQ6UWT2 76 aa6.83□□□□□ -1.32
SYNE2-206ENST00000441438 C14orf132Q9NPU4 83 aa6.83□□□□□ -1.32
SYNE2-206ENST00000441438 ITPR3Q14573 2671 aa6.83□□□□□ -1.32
SYNE2-206ENST00000441438 TRAV21A0A0B4J279 112 aa6.82□□□□□ -1.32
SYNE2-206ENST00000441438 TRBV6-5A0A0K0K1A5 114 aa6.82□□□□□ -1.32
SYNE2-206ENST00000441438 LINC00315P59091 139 aa6.82□□□□□ -1.32
SYNE2-206ENST00000441438 FLNAP21333 2647 aaKnown RBP6.81□□□□□ -1.32
SYNE2-206ENST00000441438 LINC00483Q53H64 154 aa6.81□□□□□ -1.32
SYNE2-206ENST00000441438 PRR9Q5T870 116 aa6.81□□□□□ -1.32
SYNE2-206ENST00000441438 MIR7-3HGQ8N6C7 128 aa6.81□□□□□ -1.32
SYNE2-206ENST00000441438 C14orf178Q8N769 122 aaPredicted RBP6.81□□□□□ -1.32
SYNE2-206ENST00000441438 FN1P02751 2386 aaKnown RBP6.8□□□□□ -1.32
SYNE2-206ENST00000441438 TRAV10A0A0B4J240 114 aa6.8□□□□□ -1.32
SYNE2-206ENST00000441438 SMR3AQ99954 134 aa6.8□□□□□ -1.32
SYNE2-206ENST00000441438 CR1P17927 2039 aa6.8□□□□□ -1.32
SYNE2-206ENST00000441438 IGKV3-20P01619 116 aa6.8□□□□□ -1.32
SYNE2-206ENST00000441438 HIVEP2P31629 2446 aa6.8□□□□□ -1.32
SYNE2-206ENST00000441438 TEP1Q99973 2627 aaKnown RBP6.79□□□□□ -1.32
SYNE2-206ENST00000441438 H3BUX3 64 aa6.79□□□□□ -1.32
SYNE2-206ENST00000441438 NREPQ16612 68 aa6.79□□□□□ -1.32
SYNE2-206ENST00000441438 C10orf99Q6UWK7 81 aa6.79□□□□□ -1.32
SYNE2-206ENST00000441438 A0A087WSZ3 146 aa6.79□□□□□ -1.32
SYNE2-206ENST00000441438 LITAFQ99732 161 aa6.79□□□□□ -1.32
SYNE2-206ENST00000441438 INSP01308 110 aa6.78□□□□□ -1.32
SYNE2-206ENST00000441438 RNASE3P12724 160 aaKnown RBP6.78□□□□□ -1.32
SYNE2-206ENST00000441438 SMIM29Q86T20 159 aa6.78□□□□□ -1.32
SYNE2-206ENST00000441438 NDUFAF8A1L188 74 aa6.78□□□□□ -1.32
SYNE2-206ENST00000441438 MINOS1Q5TGZ0 78 aa6.78□□□□□ -1.32
SYNE2-206ENST00000441438 MINOS1-NBL1R4GNA1 71 aa6.78□□□□□ -1.32
SYNE2-206ENST00000441438 MGPP08493 103 aa6.78□□□□□ -1.32
SYNE2-206ENST00000441438 C5orf56Q8N8D9 126 aa6.77□□□□□ -1.33
SYNE2-206ENST00000441438 WFDC9Q8NEX5 89 aa6.77□□□□□ -1.33
SYNE2-206ENST00000441438 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.77□□□□□ -1.33
SYNE2-206ENST00000441438 OBSCN-AS1Q96MR7 158 aa6.77□□□□□ -1.33
SYNE2-206ENST00000441438 RPL39P62891 51 aaKnown RBP6.76□□□□□ -1.33
SYNE2-206ENST00000441438 LINC00167Q96N53 147 aa6.76□□□□□ -1.33
SYNE2-206ENST00000441438 ORMDL1Q9P0S3 153 aa6.75□□□□□ -1.33
SYNE2-206ENST00000441438 HTN1P15515 57 aa6.75□□□□□ -1.33
SYNE2-206ENST00000441438 H3BPC8 53 aa6.75□□□□□ -1.33
SYNE2-206ENST00000441438 NBEAL2Q6ZNJ1 2754 aa6.74□□□□□ -1.33
SYNE2-206ENST00000441438 NSD1Q96L73 2696 aaPredicted RBP6.74□□□□□ -1.33
SYNE2-206ENST00000441438 IGLV10-54A0A075B6I4 117 aa6.73□□□□□ -1.33
SYNE2-206ENST00000441438 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.73□□□□□ -1.33
SYNE2-206ENST00000441438 I3L3M4 83 aa6.73□□□□□ -1.33
SYNE2-206ENST00000441438 FAM74A4Q5TZK3 123 aa6.73□□□□□ -1.33
SYNE2-206ENST00000441438 M0QY20 66 aa6.71□□□□□ -1.33
SYNE2-206ENST00000441438 RHPN1-AS1Q9BWJ2 59 aa6.71□□□□□ -1.33
SYNE2-206ENST00000441438 ELOF1P60002 83 aaKnown RBP6.71□□□□□ -1.34
SYNE2-206ENST00000441438 PANO1I0J062 215 aa6.7□□□□□ -1.34
SYNE2-206ENST00000441438 SPAG11BQ08648 103 aa6.7□□□□□ -1.34
SYNE2-206ENST00000441438 SPAG11AQ6PDA7 123 aa6.7□□□□□ -1.34
SYNE2-206ENST00000441438 NDUFA4O00483 81 aa6.69□□□□□ -1.34
SYNE2-206ENST00000441438 DEFB136Q30KP8 78 aa6.69□□□□□ -1.34
SYNE2-206ENST00000441438 Q9BRP9 147 aa6.69□□□□□ -1.34
SYNE2-206ENST00000441438 ANK3Q12955 4377 aaKnown RBP6.69□□□□□ -1.34
SYNE2-206ENST00000441438 PRR34Q9NV39 138 aa6.68□□□□□ -1.34
SYNE2-206ENST00000441438 KRTAP26-1Q6PEX3 210 aa6.68□□□□□ -1.34
SYNE2-206ENST00000441438 DEFB112Q30KQ8 113 aa6.67□□□□□ -1.34
SYNE2-206ENST00000441438 UBL5Q9BZL1 73 aa6.67□□□□□ -1.34
SYNE2-206ENST00000441438 Q8N1X5 172 aa6.67□□□□□ -1.34
SYNE2-206ENST00000441438 PLAC8Q9NZF1 115 aa6.67□□□□□ -1.34
SYNE2-206ENST00000441438 TRBV10-1A0A0K0K1A3 114 aa6.66□□□□□ -1.34
SYNE2-206ENST00000441438 SPINK13Q1W4C9 94 aa6.66□□□□□ -1.34
SYNE2-206ENST00000441438 IGHV3-64A0A075B6Q5 118 aa6.65□□□□□ -1.34
SYNE2-206ENST00000441438 H3BQ85 93 aa6.65□□□□□ -1.34
SYNE2-206ENST00000441438 NDUFA1O15239 70 aa6.65□□□□□ -1.34
SYNE2-206ENST00000441438 KRTAP24-1Q3LI83 254 aa6.64□□□□□ -1.35
SYNE2-206ENST00000441438 H3BUA1 57 aa6.64□□□□□ -1.35
SYNE2-206ENST00000441438 HIGD2AQ9BW72 106 aa6.64□□□□□ -1.35
SYNE2-206ENST00000441438 Q8N3U1 123 aa6.63□□□□□ -1.35
SYNE2-206ENST00000441438 KPRPQ5T749 579 aaPredicted RBP6.63□□□□□ -1.35
SYNE2-206ENST00000441438 LINC01558Q9Y6Z2 57 aa6.63□□□□□ -1.35
SYNE2-206ENST00000441438 KRTAP25-1Q3LHN0 102 aa6.63□□□□□ -1.35
SYNE2-206ENST00000441438 USMG5Q96IX5 58 aa6.63□□□□□ -1.35
SYNE2-206ENST00000441438 SPINK7P58062 85 aa6.62□□□□□ -1.35
SYNE2-206ENST00000441438 LINC00308Q8TCZ7 52 aa6.62□□□□□ -1.35
SYNE2-206ENST00000441438 VWFP04275 2813 aa6.62□□□□□ -1.35
SYNE2-206ENST00000441438 LCE6AA0A183 80 aa6.61□□□□□ -1.35
SYNE2-206ENST00000441438 CNBPP62633 177 aaKnown RBP6.61□□□□□ -1.35
SYNE2-206ENST00000441438 LCE2DQ5TA82 110 aaPredicted RBP6.59□□□□□ -1.35
SYNE2-206ENST00000441438 ZCCHC13Q8WW36 166 aaKnown RBP6.59□□□□□ -1.35
SYNE2-206ENST00000441438 LINC00208Q96KT6 92 aa6.59□□□□□ -1.35
SYNE2-206ENST00000441438 GIG44P09565 113 aaPredicted RBP6.59□□□□□ -1.35
SYNE2-206ENST00000441438 ATRQ13535 2644 aa6.57□□□□□ -1.36
SYNE2-206ENST00000441438 DEFB131AP59861 70 aa6.57□□□□□ -1.36
SYNE2-206ENST00000441438 C1orf137Q5JT78 98 aa6.57□□□□□ -1.36
SYNE2-206ENST00000441438 DNHD1Q96M86 4753 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms