RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 IGIPA6NJ69 53 aa4.8□□□□□ -1.64
RTN4-211ENST00000438462 OCC1Q8TAD7 63 aa4.8□□□□□ -1.64
RTN4-211ENST00000438462 SPRR2GQ9BYE4 73 aa4.8□□□□□ -1.64
RTN4-211ENST00000438462 A0A0U1RRA0 63 aa4.79□□□□□ -1.64
RTN4-211ENST00000438462 TINCRA0A1B0GVN0 87 aa4.79□□□□□ -1.64
RTN4-211ENST00000438462 A0A1W2PNM2 257 aa4.79□□□□□ -1.64
RTN4-211ENST00000438462 SSNA1O43805 119 aa4.79□□□□□ -1.64
RTN4-211ENST00000438462 LINC00158P58513 81 aa4.79□□□□□ -1.64
RTN4-211ENST00000438462 RIGQ13278 110 aa4.79□□□□□ -1.64
RTN4-211ENST00000438462 CT83Q5H943 113 aa4.79□□□□□ -1.64
RTN4-211ENST00000438462 TMA7Q9Y2S6 64 aaKnown RBP4.79□□□□□ -1.64
RTN4-211ENST00000438462 DDTP30046 118 aa4.78□□□□□ -1.64
RTN4-211ENST00000438462 LINC00310P59036 64 aa4.77□□□□□ -1.65
RTN4-211ENST00000438462 PMVKQ15126 192 aa4.77□□□□□ -1.65
RTN4-211ENST00000438462 PDE6DO43924 150 aa4.76□□□□□ -1.65
RTN4-211ENST00000438462 PAPPA-AS1Q5QFB9 102 aa4.76□□□□□ -1.65
RTN4-211ENST00000438462 FAM218AQ96MZ4 157 aa4.76□□□□□ -1.65
RTN4-211ENST00000438462 IGLV5-39A0A0G2JS06 123 aa4.75□□□□□ -1.65
RTN4-211ENST00000438462 NDUFA6P56556 154 aa4.75□□□□□ -1.65
RTN4-211ENST00000438462 AHNAKQ09666 5890 aaKnown RBP4.74□□□□□ -1.65
RTN4-211ENST00000438462 HMSDA8MTL9 139 aa4.73□□□□□ -1.65
RTN4-211ENST00000438462 H3BRM9 83 aa4.72□□□□□ -1.65
RTN4-211ENST00000438462 RPL23P62829 140 aaKnown RBP4.72□□□□□ -1.65
RTN4-211ENST00000438462 TRAV23DV6A0A075B6W5 121 aa4.71□□□□□ -1.66
RTN4-211ENST00000438462 FAM236AA0A1B0GUQ0 79 aa4.71□□□□□ -1.66
RTN4-211ENST00000438462 FAM236BA0A1B0GV22 79 aa4.71□□□□□ -1.66
RTN4-211ENST00000438462 DEFB105AQ8NG35 78 aa4.71□□□□□ -1.66
RTN4-211ENST00000438462 ZCCHC13Q8WW36 166 aaKnown RBP4.7□□□□□ -1.66
RTN4-211ENST00000438462 ZNF73O43830 326 aaPredicted RBP4.69□□□□□ -1.66
RTN4-211ENST00000438462 TAL2Q16559 108 aa4.69□□□□□ -1.66
RTN4-211ENST00000438462 Q5BKY6 102 aa4.69□□□□□ -1.66
RTN4-211ENST00000438462 C9orf118A6NHY6 69 aa4.68□□□□□ -1.66
RTN4-211ENST00000438462 UMAD1C9J7I0 102 aa4.68□□□□□ -1.66
RTN4-211ENST00000438462 SFTA2Q6UW10 78 aa4.68□□□□□ -1.66
RTN4-211ENST00000438462 ATP6V1G1O75348 118 aa4.67□□□□□ -1.66
RTN4-211ENST00000438462 SMIM13P0DJ93 91 aa4.67□□□□□ -1.66
RTN4-211ENST00000438462 LINC00299Q6ZSB3 139 aa4.67□□□□□ -1.66
RTN4-211ENST00000438462 MIR7-3HGQ8N6C7 128 aa4.67□□□□□ -1.66
RTN4-211ENST00000438462 TEX49A0A1B0GTD5 131 aa4.66□□□□□ -1.66
RTN4-211ENST00000438462 PPBPP02775 128 aa4.66□□□□□ -1.66
RTN4-211ENST00000438462 DSCR10P59022 87 aa4.66□□□□□ -1.66
RTN4-211ENST00000438462 ORMDL2Q53FV1 153 aa4.66□□□□□ -1.66
RTN4-211ENST00000438462 ORMDL3Q8N138 153 aa4.66□□□□□ -1.66
RTN4-211ENST00000438462 PRELID3AQ96N28 172 aa4.66□□□□□ -1.66
RTN4-211ENST00000438462 TRBV10-2A0A0K0K1G8 114 aa4.65□□□□□ -1.67
RTN4-211ENST00000438462 KRTAP12-2P59991 146 aa4.65□□□□□ -1.67
RTN4-211ENST00000438462 ZNF345Q14585 488 aa4.65□□□□□ -1.67
RTN4-211ENST00000438462 C21orf62-AS1Q17RA5 79 aa4.65□□□□□ -1.67
RTN4-211ENST00000438462 S100A7L2Q5SY68 101 aa4.65□□□□□ -1.67
RTN4-211ENST00000438462 RBM3P98179 157 aaKnown RBP4.64□□□□□ -1.67
RTN4-211ENST00000438462 DHRS4-AS1Q9P1J3 65 aa4.64□□□□□ -1.67
RTN4-211ENST00000438462 TMEM136Q6ZRR5 245 aa4.63□□□□□ -1.67
RTN4-211ENST00000438462 WFDC13Q8IUB5 93 aa4.63□□□□□ -1.67
RTN4-211ENST00000438462 Q8N8P6 123 aa4.63□□□□□ -1.67
RTN4-211ENST00000438462 MAP1LC3AQ9H492 121 aa4.63□□□□□ -1.67
RTN4-211ENST00000438462 CST9LQ9H4G1 147 aa4.63□□□□□ -1.67
RTN4-211ENST00000438462 TRBV7-7A0A0K0K1E9 115 aa4.62□□□□□ -1.67
RTN4-211ENST00000438462 ADCYAP1P18509 176 aa4.62□□□□□ -1.67
RTN4-211ENST00000438462 NAT8BQ9UHF3 227 aa4.62□□□□□ -1.67
RTN4-211ENST00000438462 HINT1P49773 126 aaPredicted RBP4.61□□□□□ -1.67
RTN4-211ENST00000438462 TOMM6Q96B49 74 aa4.61□□□□□ -1.67
RTN4-211ENST00000438462 SPANXB1Q9NS25 103 aaPredicted RBP4.61□□□□□ -1.67
RTN4-211ENST00000438462 F8W036 122 aa4.6□□□□□ -1.67
RTN4-211ENST00000438462 ZNF22P17026 224 aaPredicted RBP4.6□□□□□ -1.67
RTN4-211ENST00000438462 MEIG1Q5JSS6 88 aa4.6□□□□□ -1.67
RTN4-211ENST00000438462 ERASQ7Z444 233 aa4.6□□□□□ -1.67
RTN4-211ENST00000438462 PRO2289Q9P1D8 64 aa4.6□□□□□ -1.67
RTN4-211ENST00000438462 V9GYV3 84 aa4.6□□□□□ -1.67
RTN4-211ENST00000438462 A0A1B0GW15 77 aa4.59□□□□□ -1.67
RTN4-211ENST00000438462 LST1O00453 97 aa4.59□□□□□ -1.67
RTN4-211ENST00000438462 SPINK7P58062 85 aa4.59□□□□□ -1.67
RTN4-211ENST00000438462 FAM74A3Q4VXF1 159 aa4.59□□□□□ -1.67
RTN4-211ENST00000438462 SCGB3A1Q96QR1 104 aa4.59□□□□□ -1.67
RTN4-211ENST00000438462 MT1XP80297 61 aa4.58□□□□□ -1.68
RTN4-211ENST00000438462 MRPL54Q6P161 138 aaKnown RBP4.58□□□□□ -1.68
RTN4-211ENST00000438462 FA2HQ7L5A8 372 aa4.58□□□□□ -1.68
RTN4-211ENST00000438462 OSTCQ9NRP0 149 aa4.58□□□□□ -1.68
RTN4-211ENST00000438462 IGLC3P0DOY3 106 aa4.57□□□□□ -1.68
RTN4-211ENST00000438462 MUC5ACP98088 5654 aa4.57□□□□□ -1.68
RTN4-211ENST00000438462 MUC5BQ9HC84 5762 aaPredicted RBP4.57□□□□□ -1.68
RTN4-211ENST00000438462 A0A1B0GWB2 263 aa4.55□□□□□ -1.68
RTN4-211ENST00000438462 K7EMI3 77 aa4.55□□□□□ -1.68
RTN4-211ENST00000438462 NXT2Q9NPJ8 142 aaKnown RBP4.55□□□□□ -1.68
RTN4-211ENST00000438462 TEX46H3BTG2 121 aa4.54□□□□□ -1.68
RTN4-211ENST00000438462 ARPC5O15511 151 aa4.54□□□□□ -1.68
RTN4-211ENST00000438462 H1FX-AS1Q4G0G2 97 aa4.54□□□□□ -1.68
RTN4-211ENST00000438462 LAMTOR2Q9Y2Q5 125 aa4.54□□□□□ -1.68
RTN4-211ENST00000438462 A0A1B0GXF2 115 aa4.53□□□□□ -1.68
RTN4-211ENST00000438462 S100A8P05109 93 aa4.53□□□□□ -1.68
RTN4-211ENST00000438462 G0S2P27469 103 aa4.53□□□□□ -1.68
RTN4-211ENST00000438462 BATF3Q9NR55 127 aa4.53□□□□□ -1.68
RTN4-211ENST00000438462 IGLV5-48A0A075B6I7 105 aa4.52□□□□□ -1.69
RTN4-211ENST00000438462 CEBPGP53567 150 aa4.52□□□□□ -1.69
RTN4-211ENST00000438462 SMIM27A0A1W2PRY6 76 aa4.51□□□□□ -1.69
RTN4-211ENST00000438462 ELOF1P60002 83 aaKnown RBP4.5□□□□□ -1.69
RTN4-211ENST00000438462 CLEC2BQ92478 149 aa4.5□□□□□ -1.69
RTN4-211ENST00000438462 COX7BP24311 80 aa4.48□□□□□ -1.69
RTN4-211ENST00000438462 TMEM170BQ5T4T1 132 aa4.48□□□□□ -1.69
RTN4-211ENST00000438462 COLCA2A8K830 154 aa4.47□□□□□ -1.69
RTN4-211ENST00000438462 F8WEM9 126 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms