RNA–Protein interactions for RNA: ENST00000437811.1

HLA-DPA1-243, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-243ENST00000437811 KCNQ1DNQ9H478 68 aa8.61□□□□□ -1.03
HLA-DPA1-243ENST00000437811 IGLV1-50A0A075B6I6 118 aa8.6□□□□□ -1.03
HLA-DPA1-243ENST00000437811 MTURNQ8N3F0 131 aa8.6□□□□□ -1.03
HLA-DPA1-243ENST00000437811 SPACA4Q8TDM5 124 aa8.6□□□□□ -1.03
HLA-DPA1-243ENST00000437811 A0A087WYN8 130 aa8.59□□□□□ -1.03
HLA-DPA1-243ENST00000437811 TRBV7-6A0A0J9YX20 115 aa8.59□□□□□ -1.03
HLA-DPA1-243ENST00000437811 C9JAW5 83 aa8.59□□□□□ -1.03
HLA-DPA1-243ENST00000437811 F8W1H4 67 aa8.59□□□□□ -1.03
HLA-DPA1-243ENST00000437811 PANO1I0J062 215 aa8.59□□□□□ -1.03
HLA-DPA1-243ENST00000437811 PRYO14603 147 aa8.59□□□□□ -1.03
HLA-DPA1-243ENST00000437811 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.59□□□□□ -1.03
HLA-DPA1-243ENST00000437811 RPL37AP8A6NKH3 93 aa8.58□□□□□ -1.04
HLA-DPA1-243ENST00000437811 SACSQ9NZJ4 4579 aa8.57□□□□□ -1.04
HLA-DPA1-243ENST00000437811 HYDINQ4G0P3 5121 aa8.57□□□□□ -1.04
HLA-DPA1-243ENST00000437811 A0A1B0GX51 115 aa8.57□□□□□ -1.04
HLA-DPA1-243ENST00000437811 SLC25A20O43772 301 aa8.57□□□□□ -1.04
HLA-DPA1-243ENST00000437811 COX7BP24311 80 aa8.57□□□□□ -1.04
HLA-DPA1-243ENST00000437811 KRTAP10-2P60368 255 aa8.57□□□□□ -1.04
HLA-DPA1-243ENST00000437811 EPM2AB3EWF7 344 aa8.56□□□□□ -1.04
HLA-DPA1-243ENST00000437811 ELOF1P60002 83 aaKnown RBP8.56□□□□□ -1.04
HLA-DPA1-243ENST00000437811 LINC00575Q6W349 94 aa8.56□□□□□ -1.04
HLA-DPA1-243ENST00000437811 SPRR1AP35321 89 aa8.55□□□□□ -1.04
HLA-DPA1-243ENST00000437811 LINC01600Q96MT4 127 aa8.55□□□□□ -1.04
HLA-DPA1-243ENST00000437811 H3BT86 120 aa8.54□□□□□ -1.04
HLA-DPA1-243ENST00000437811 DNAL4O96015 105 aa8.54□□□□□ -1.04
HLA-DPA1-243ENST00000437811 PHF5AQ7RTV0 110 aaKnown RBP8.54□□□□□ -1.04
HLA-DPA1-243ENST00000437811 FRAS1Q86XX4 4008 aa8.54□□□□□ -1.04
HLA-DPA1-243ENST00000437811 KRTAP4-16G5E9R7 235 aaPredicted RBP8.53□□□□□ -1.04
HLA-DPA1-243ENST00000437811 LINC00336Q6ZUF6 198 aa8.53□□□□□ -1.04
HLA-DPA1-243ENST00000437811 ANKRD29Q8N6D5 301 aa8.53□□□□□ -1.04
HLA-DPA1-243ENST00000437811 DPH3Q96FX2 82 aa8.53□□□□□ -1.04
HLA-DPA1-243ENST00000437811 SNCGO76070 127 aa8.52□□□□□ -1.05
HLA-DPA1-243ENST00000437811 hADV29S1A0JD25 119 aa8.51□□□□□ -1.05
HLA-DPA1-243ENST00000437811 UBE2BP63146 152 aa8.51□□□□□ -1.05
HLA-DPA1-243ENST00000437811 REG3GQ6UW15 175 aa8.51□□□□□ -1.05
HLA-DPA1-243ENST00000437811 PLAC8Q9NZF1 115 aa8.51□□□□□ -1.05
HLA-DPA1-243ENST00000437811 ETDCA0A1B0GVM5 59 aa8.5□□□□□ -1.05
HLA-DPA1-243ENST00000437811 B5MCH6 92 aa8.5□□□□□ -1.05
HLA-DPA1-243ENST00000437811 DNAH11Q96DT5 4516 aa8.5□□□□□ -1.05
HLA-DPA1-243ENST00000437811 BAALC-AS2P0C853 105 aa8.49□□□□□ -1.05
HLA-DPA1-243ENST00000437811 ETDBQ3ZM63 59 aa8.49□□□□□ -1.05
HLA-DPA1-243ENST00000437811 KRTAP11-1Q8IUC1 163 aa8.49□□□□□ -1.05
HLA-DPA1-243ENST00000437811 Q6ZRX8 168 aa8.48□□□□□ -1.05
HLA-DPA1-243ENST00000437811 TEN1Q86WV5 123 aa8.48□□□□□ -1.05
HLA-DPA1-243ENST00000437811 ORMDL1Q9P0S3 153 aa8.48□□□□□ -1.05
HLA-DPA1-243ENST00000437811 FAT2Q9NYQ8 4349 aa8.48□□□□□ -1.05
HLA-DPA1-243ENST00000437811 INAFM2P0DMQ5 153 aa8.48□□□□□ -1.05
HLA-DPA1-243ENST00000437811 KRTAP10-1P60331 282 aa8.47□□□□□ -1.05
HLA-DPA1-243ENST00000437811 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.47□□□□□ -1.05
HLA-DPA1-243ENST00000437811 HECTD4Q9Y4D8 3996 aa8.46□□□□□ -1.05
HLA-DPA1-243ENST00000437811 Q6ZQY7 126 aa8.46□□□□□ -1.06
HLA-DPA1-243ENST00000437811 DHRS4-AS1Q9P1J3 65 aa8.46□□□□□ -1.06
HLA-DPA1-243ENST00000437811 RYR2Q92736 4967 aa8.46□□□□□ -1.06
HLA-DPA1-243ENST00000437811 Q6ZSA8 131 aa8.45□□□□□ -1.06
HLA-DPA1-243ENST00000437811 FAM19A1Q7Z5A9 133 aa8.45□□□□□ -1.06
HLA-DPA1-243ENST00000437811 Q9BRP9 147 aa8.45□□□□□ -1.06
HLA-DPA1-243ENST00000437811 FAM30AQ9NZY2 134 aa8.45□□□□□ -1.06
HLA-DPA1-243ENST00000437811 A0A1B0GVY2 172 aa8.44□□□□□ -1.06
HLA-DPA1-243ENST00000437811 DNAH5Q8TE73 4624 aa8.44□□□□□ -1.06
HLA-DPA1-243ENST00000437811 OCIAD2Q56VL3 154 aa8.43□□□□□ -1.06
HLA-DPA1-243ENST00000437811 H3BQ85 93 aa8.42□□□□□ -1.06
HLA-DPA1-243ENST00000437811 PRLHP81277 87 aa8.42□□□□□ -1.06
HLA-DPA1-243ENST00000437811 PPDPFLQ8WWR9 84 aa8.42□□□□□ -1.06
HLA-DPA1-243ENST00000437811 H0Y9J4 135 aa8.41□□□□□ -1.06
HLA-DPA1-243ENST00000437811 TMEM256-PLSCR3K7ERE1 68 aa8.41□□□□□ -1.06
HLA-DPA1-243ENST00000437811 BCE1O60756 84 aa8.41□□□□□ -1.06
HLA-DPA1-243ENST00000437811 CIRBP-AS1Q8TBR5 109 aa8.41□□□□□ -1.06
HLA-DPA1-243ENST00000437811 SMCR5Q8TEV8 140 aa8.41□□□□□ -1.06
HLA-DPA1-243ENST00000437811 DNAH8Q96JB1 4490 aa8.41□□□□□ -1.06
HLA-DPA1-243ENST00000437811 PKD1P98161 4303 aa8.4□□□□□ -1.06
HLA-DPA1-243ENST00000437811 SCXQ7RTU7 201 aa8.4□□□□□ -1.06
HLA-DPA1-243ENST00000437811 TEX49A0A1B0GTD5 131 aa8.39□□□□□ -1.07
HLA-DPA1-243ENST00000437811 ERC2-IT1O76042 136 aa8.39□□□□□ -1.07
HLA-DPA1-243ENST00000437811 UBE2AP49459 152 aa8.38□□□□□ -1.07
HLA-DPA1-243ENST00000437811 KRTAP13-1Q8IUC0 172 aa8.37□□□□□ -1.07
HLA-DPA1-243ENST00000437811 PSORS1C2Q9UIG4 136 aa8.37□□□□□ -1.07
HLA-DPA1-243ENST00000437811 K7ERU9 68 aa8.36□□□□□ -1.07
HLA-DPA1-243ENST00000437811 LINC01547P58512 204 aaPredicted RBP8.36□□□□□ -1.07
HLA-DPA1-243ENST00000437811 OBSCN-AS1Q96MR7 158 aa8.36□□□□□ -1.07
HLA-DPA1-243ENST00000437811 HIGD2AQ9BW72 106 aa8.36□□□□□ -1.07
HLA-DPA1-243ENST00000437811 IGLV5-48A0A075B6I7 105 aa8.35□□□□□ -1.07
HLA-DPA1-243ENST00000437811 ST20-AS1Q8NBB2 130 aa8.35□□□□□ -1.07
HLA-DPA1-243ENST00000437811 J3QR89 54 aa8.35□□□□□ -1.07
HLA-DPA1-243ENST00000437811 HAMPP81172 84 aa8.35□□□□□ -1.07
HLA-DPA1-243ENST00000437811 KMT2CQ8NEZ4 4911 aaKnown RBP8.34□□□□□ -1.07
HLA-DPA1-243ENST00000437811 JMJD7-PLA2G4BH0Y9G9 81 aa8.34□□□□□ -1.07
HLA-DPA1-243ENST00000437811 C1orf137Q5JT78 98 aa8.34□□□□□ -1.07
HLA-DPA1-243ENST00000437811 Q8N377 158 aa8.34□□□□□ -1.07
HLA-DPA1-243ENST00000437811 DEFB105AQ8NG35 78 aa8.34□□□□□ -1.07
HLA-DPA1-243ENST00000437811 LAMTOR3Q9UHA4 124 aa8.33□□□□□ -1.08
HLA-DPA1-243ENST00000437811 NDUFV3P56181 108 aaKnown RBP8.32□□□□□ -1.08
HLA-DPA1-243ENST00000437811 A0A1B0GV72 72 aa8.31□□□□□ -1.08
HLA-DPA1-243ENST00000437811 C14orf132Q9NPU4 83 aa8.31□□□□□ -1.08
HLA-DPA1-243ENST00000437811 ZNF861PO60384 105 aa8.29□□□□□ -1.08
HLA-DPA1-243ENST00000437811 IGLV7-43P04211 117 aa8.29□□□□□ -1.08
HLA-DPA1-243ENST00000437811 RBM3P98179 157 aaKnown RBP8.29□□□□□ -1.08
HLA-DPA1-243ENST00000437811 SPRR1BP22528 89 aa8.28□□□□□ -1.08
HLA-DPA1-243ENST00000437811 DYNC1H1Q14204 4646 aaKnown RBP8.26□□□□□ -1.09
HLA-DPA1-243ENST00000437811 SMIM29Q86T20 159 aa8.26□□□□□ -1.09
HLA-DPA1-243ENST00000437811 C3orf22Q8N5N4 141 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms