RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 C21orf62-AS1Q17RA5 79 aa16.56■□□□□ 0.24
CPNE1-216ENST00000437340 FAM168BA1KXE4 195 aa16.52■□□□□ 0.24
CPNE1-216ENST00000437340 VPS13DQ5THJ4 4388 aa16.51■□□□□ 0.23
CPNE1-216ENST00000437340 IGLV1-50A0A075B6I6 118 aa16.51■□□□□ 0.23
CPNE1-216ENST00000437340 PRYO14603 147 aa16.51■□□□□ 0.23
CPNE1-216ENST00000437340 Q6Q795 121 aa16.51■□□□□ 0.23
CPNE1-216ENST00000437340 KRTAP7-1Q8IUC3 87 aa16.51■□□□□ 0.23
CPNE1-216ENST00000437340 CCKP06307 115 aa16.5■□□□□ 0.23
CPNE1-216ENST00000437340 LINC00643Q86TS7 51 aa16.49■□□□□ 0.23
CPNE1-216ENST00000437340 C16orf90A8MZG2 172 aa16.49■□□□□ 0.23
CPNE1-216ENST00000437340 SMCR5Q8TEV8 140 aa16.48■□□□□ 0.23
CPNE1-216ENST00000437340 LAMTOR3Q9UHA4 124 aa16.48■□□□□ 0.23
CPNE1-216ENST00000437340 DNAH10Q8IVF4 4471 aa16.48■□□□□ 0.23
CPNE1-216ENST00000437340 RBM3P98179 157 aaKnown RBP16.47■□□□□ 0.23
CPNE1-216ENST00000437340 MRPL55Q7Z7F7 128 aaKnown RBP16.47■□□□□ 0.23
CPNE1-216ENST00000437340 A0A1B0GV72 72 aa16.46■□□□□ 0.23
CPNE1-216ENST00000437340 SPRR1AP35321 89 aa16.46■□□□□ 0.22
CPNE1-216ENST00000437340 FAM19A5Q7Z5A7 132 aaPredicted RBP16.45■□□□□ 0.22
CPNE1-216ENST00000437340 LRCOL1A6NCL2 159 aa16.44■□□□□ 0.22
CPNE1-216ENST00000437340 TRBV7-7A0A0K0K1E9 115 aa16.43■□□□□ 0.22
CPNE1-216ENST00000437340 KRTAP4-16G5E9R7 235 aaPredicted RBP16.43■□□□□ 0.22
CPNE1-216ENST00000437340 A0A096LNI7 61 aa16.43■□□□□ 0.22
CPNE1-216ENST00000437340 RPL37AP8A6NKH3 93 aa16.43■□□□□ 0.22
CPNE1-216ENST00000437340 Q6ZRN7 208 aaPredicted RBP16.43■□□□□ 0.22
CPNE1-216ENST00000437340 LOC110117498A0A087WWA1 95 aa16.42■□□□□ 0.22
CPNE1-216ENST00000437340 PKIGQ9Y2B9 76 aa16.41■□□□□ 0.22
CPNE1-216ENST00000437340 DHRS4-AS1Q9P1J3 65 aa16.41■□□□□ 0.22
CPNE1-216ENST00000437340 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.4■□□□□ 0.22
CPNE1-216ENST00000437340 PDE6GP18545 87 aa16.4■□□□□ 0.22
CPNE1-216ENST00000437340 Q6ZRX8 168 aa16.4■□□□□ 0.22
CPNE1-216ENST00000437340 IMUPQ9GZP8 106 aa16.4■□□□□ 0.22
CPNE1-216ENST00000437340 LINC00846Q9NV44 126 aa16.39■□□□□ 0.21
CPNE1-216ENST00000437340 B5MCH6 92 aa16.38■□□□□ 0.21
CPNE1-216ENST00000437340 ETDCA0A1B0GVM5 59 aa16.38■□□□□ 0.21
CPNE1-216ENST00000437340 Q6ZQT0 140 aa16.38■□□□□ 0.21
CPNE1-216ENST00000437340 DSCR8Q96T75 97 aa16.37■□□□□ 0.21
CPNE1-216ENST00000437340 C9orf163Q8N9P6 203 aa16.36■□□□□ 0.21
CPNE1-216ENST00000437340 C3orf84H3BNL1 204 aa16.36■□□□□ 0.21
CPNE1-216ENST00000437340 IGKV2-24A0A0C4DH68 120 aa16.35■□□□□ 0.21
CPNE1-216ENST00000437340 NDUFV3P56181 108 aaKnown RBP16.35■□□□□ 0.21
CPNE1-216ENST00000437340 ALMS1Q8TCU4 4167 aa16.32■□□□□ 0.2
CPNE1-216ENST00000437340 REG3GQ6UW15 175 aa16.32■□□□□ 0.2
CPNE1-216ENST00000437340 A0A1W2PNN7 141 aa16.31■□□□□ 0.2
CPNE1-216ENST00000437340 KMT2AQ03164 3969 aa16.31■□□□□ 0.2
CPNE1-216ENST00000437340 Q9BRP9 147 aa16.31■□□□□ 0.2
CPNE1-216ENST00000437340 TRBV7-4A0A0J9YYF1 115 aa16.3■□□□□ 0.2
CPNE1-216ENST00000437340 M0R2N4 97 aa16.28■□□□□ 0.2
CPNE1-216ENST00000437340 Q6JHZ5 121 aa16.28■□□□□ 0.2
CPNE1-216ENST00000437340 LY6G6CO95867 125 aa16.28■□□□□ 0.2
CPNE1-216ENST00000437340 DNAH6Q9C0G6 4158 aa16.27■□□□□ 0.2
CPNE1-216ENST00000437340 LINC00476Q8WZB0 136 aa16.27■□□□□ 0.2
CPNE1-216ENST00000437340 LINC00474Q9P2X8 69 aa16.27■□□□□ 0.2
CPNE1-216ENST00000437340 Q6ZR54 194 aa16.26■□□□□ 0.19
CPNE1-216ENST00000437340 LINC01547P58512 204 aaPredicted RBP16.24■□□□□ 0.19
CPNE1-216ENST00000437340 Q8N377 158 aa16.24■□□□□ 0.19
CPNE1-216ENST00000437340 UBL5Q9BZL1 73 aa16.23■□□□□ 0.19
CPNE1-216ENST00000437340 CHTF8P0CG12 524 aa16.22■□□□□ 0.19
CPNE1-216ENST00000437340 IGLV5-48A0A075B6I7 105 aa16.21■□□□□ 0.19
CPNE1-216ENST00000437340 A0A087WTM6 91 aa16.21■□□□□ 0.18
CPNE1-216ENST00000437340 DEFB105AQ8NG35 78 aa16.21■□□□□ 0.18
CPNE1-216ENST00000437340 UBE2BP63146 152 aa16.2■□□□□ 0.18
CPNE1-216ENST00000437340 ATP5EP2Q5VTU8 51 aa16.2■□□□□ 0.18
CPNE1-216ENST00000437340 ANAPC13Q9BS18 74 aa16.19■□□□□ 0.18
CPNE1-216ENST00000437340 DNAH2Q9P225 4427 aa16.15■□□□□ 0.18
CPNE1-216ENST00000437340 IGKV3D-7A0A0C4DH55 119 aa16.15■□□□□ 0.18
CPNE1-216ENST00000437340 ERC2-IT1O76042 136 aa16.15■□□□□ 0.18
CPNE1-216ENST00000437340 PHF5AQ7RTV0 110 aaKnown RBP16.15■□□□□ 0.18
CPNE1-216ENST00000437340 ST20-AS1Q8NBB2 130 aa16.14■□□□□ 0.17
CPNE1-216ENST00000437340 FAM19A1Q7Z5A9 133 aa16.13■□□□□ 0.17
CPNE1-216ENST00000437340 FAM236AA0A1B0GUQ0 79 aa16.11■□□□□ 0.17
CPNE1-216ENST00000437340 FAM236BA0A1B0GV22 79 aa16.11■□□□□ 0.17
CPNE1-216ENST00000437340 H0Y9J4 135 aa16.09■□□□□ 0.17
CPNE1-216ENST00000437340 TNP2Q05952 138 aa16.09■□□□□ 0.17
CPNE1-216ENST00000437340 HYDINQ4G0P3 5121 aa16.08■□□□□ 0.17
CPNE1-216ENST00000437340 EPM2AB3EWF7 344 aa16.08■□□□□ 0.17
CPNE1-216ENST00000437340 C1orf134Q5TEV5 83 aa16.08■□□□□ 0.17
CPNE1-216ENST00000437340 SPACA4Q8TDM5 124 aa16.08■□□□□ 0.17
CPNE1-216ENST00000437340 PRLHP81277 87 aa16.08■□□□□ 0.16
CPNE1-216ENST00000437340 Q6ZVQ6 151 aa16.08■□□□□ 0.16
CPNE1-216ENST00000437340 PANO1I0J062 215 aa16.07■□□□□ 0.16
CPNE1-216ENST00000437340 KRTAP11-1Q8IUC1 163 aa16.06■□□□□ 0.16
CPNE1-216ENST00000437340 C3orf22Q8N5N4 141 aa16.05■□□□□ 0.16
CPNE1-216ENST00000437340 RTL8CO15255 209 aa16.05■□□□□ 0.16
CPNE1-216ENST00000437340 HIST1H4AP62805 103 aaKnown RBP16.03■□□□□ 0.16
CPNE1-216ENST00000437340 DPH3Q96FX2 82 aa16.03■□□□□ 0.16
CPNE1-216ENST00000437340 A0A1B0GW54 56 aa16.03■□□□□ 0.16
CPNE1-216ENST00000437340 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.03■□□□□ 0.16
CPNE1-216ENST00000437340 SACSQ9NZJ4 4579 aa16.01■□□□□ 0.15
CPNE1-216ENST00000437340 FRAS1Q86XX4 4008 aa16.01■□□□□ 0.15
CPNE1-216ENST00000437340 HIGD2AQ9BW72 106 aa16.01■□□□□ 0.15
CPNE1-216ENST00000437340 SMIM29Q86T20 159 aa16■□□□□ 0.15
CPNE1-216ENST00000437340 C1orf137Q5JT78 98 aa15.99■□□□□ 0.15
CPNE1-216ENST00000437340 DNAH17Q9UFH2 4485 aa15.99■□□□□ 0.15
CPNE1-216ENST00000437340 CXCL6P80162 114 aa15.98■□□□□ 0.15
CPNE1-216ENST00000437340 BCE1O60756 84 aa15.97■□□□□ 0.15
CPNE1-216ENST00000437340 FUSP35637 526 aaKnown RBP eCLIP15.97■□□□□ 0.151e-10■■□□□ 12.2
CPNE1-216ENST00000437340 HAMPP81172 84 aa15.96■□□□□ 0.15
CPNE1-216ENST00000437340 A0A087WVE0 104 aa15.95■□□□□ 0.14
CPNE1-216ENST00000437340 F8WEM9 126 aa15.95■□□□□ 0.14
CPNE1-216ENST00000437340 UBE2AP49459 152 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms