RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 C9orf116Q5BN46 136 aaPredicted RBP7.04□□□□□ -1.28
HMGCL-204ENST00000436439 ANKRD29Q8N6D5 301 aa7.04□□□□□ -1.28
HMGCL-204ENST00000436439 PPDPFLQ8WWR9 84 aa7.04□□□□□ -1.28
HMGCL-204ENST00000436439 NDUFC2O95298 119 aa7.03□□□□□ -1.28
HMGCL-204ENST00000436439 LINC00528Q8N1L1 170 aa7.03□□□□□ -1.28
HMGCL-204ENST00000436439 LINC00337Q8N6G1 96 aa7.03□□□□□ -1.28
HMGCL-204ENST00000436439 CLEC2BQ92478 149 aa7.03□□□□□ -1.28
HMGCL-204ENST00000436439 NDUFC2-KCTD14E9PQ53 114 aa7.02□□□□□ -1.29
HMGCL-204ENST00000436439 SCXQ7RTU7 201 aa7.02□□□□□ -1.29
HMGCL-204ENST00000436439 J3QL48 77 aa7.01□□□□□ -1.29
HMGCL-204ENST00000436439 TRACP01848 142 aa7.01□□□□□ -1.29
HMGCL-204ENST00000436439 PLA2G1BP04054 148 aaKnown RBP7□□□□□ -1.29
HMGCL-204ENST00000436439 KRTAP10-4P60372 401 aaPredicted RBP7□□□□□ -1.29
HMGCL-204ENST00000436439 LOC107984640A0A0U1RRK4 108 aa6.99□□□□□ -1.29
HMGCL-204ENST00000436439 KRTAP29-1A8MX34 341 aaPredicted RBP6.99□□□□□ -1.29
HMGCL-204ENST00000436439 H0YGX0 51 aa6.99□□□□□ -1.29
HMGCL-204ENST00000436439 C9orf163Q8N9P6 203 aa6.99□□□□□ -1.29
HMGCL-204ENST00000436439 SMIM11BQ8TCY0 68 aa6.99□□□□□ -1.29
HMGCL-204ENST00000436439 PKIGQ9Y2B9 76 aa6.99□□□□□ -1.29
HMGCL-204ENST00000436439 LRP1Q07954 4544 aaKnown RBP6.99□□□□□ -1.29
HMGCL-204ENST00000436439 Q6ZRP5 223 aa6.98□□□□□ -1.29
HMGCL-204ENST00000436439 OR13C6PQ8NH95 151 aa6.97□□□□□ -1.29
HMGCL-204ENST00000436439 CIRBP-AS1Q8TBR5 109 aa6.97□□□□□ -1.29
HMGCL-204ENST00000436439 PKHD1L1Q86WI1 4243 aa6.97□□□□□ -1.29
HMGCL-204ENST00000436439 FAT3Q8TDW7 4589 aa6.97□□□□□ -1.29
HMGCL-204ENST00000436439 RPL18AQ02543 176 aaKnown RBP6.95□□□□□ -1.3
HMGCL-204ENST00000436439 TMEM126AQ9H061 195 aa6.95□□□□□ -1.3
HMGCL-204ENST00000436439 PLA2G2DQ9UNK4 145 aa6.95□□□□□ -1.3
HMGCL-204ENST00000436439 C9orf129Q5T035 196 aaKnown RBP6.95□□□□□ -1.3
HMGCL-204ENST00000436439 XAGE1AQ9HD64 81 aa6.95□□□□□ -1.3
HMGCL-204ENST00000436439 GAGE2EQ4V326 116 aa6.94□□□□□ -1.3
HMGCL-204ENST00000436439 SDIM1Q6ZPB5 146 aa6.94□□□□□ -1.3
HMGCL-204ENST00000436439 FAM218AQ96MZ4 157 aa6.94□□□□□ -1.3
HMGCL-204ENST00000436439 GAGE2DQ9UEU5 116 aa6.94□□□□□ -1.3
HMGCL-204ENST00000436439 A0A1B0GX51 115 aa6.93□□□□□ -1.3
HMGCL-204ENST00000436439 DNAL4O96015 105 aa6.93□□□□□ -1.3
HMGCL-204ENST00000436439 VPREB1P12018 145 aa6.93□□□□□ -1.3
HMGCL-204ENST00000436439 Q8NDZ9 215 aa6.93□□□□□ -1.3
HMGCL-204ENST00000436439 IGLV5-37A0A075B6J1 123 aa6.92□□□□□ -1.3
HMGCL-204ENST00000436439 A0A096LNI7 61 aa6.92□□□□□ -1.3
HMGCL-204ENST00000436439 BAALC-AS2P0C853 105 aa6.92□□□□□ -1.3
HMGCL-204ENST00000436439 LINC00474Q9P2X8 69 aa6.92□□□□□ -1.3
HMGCL-204ENST00000436439 TEX49A0A1B0GTD5 131 aa6.91□□□□□ -1.3
HMGCL-204ENST00000436439 NCR3O14931 201 aa6.91□□□□□ -1.3
HMGCL-204ENST00000436439 PRR3P79522 188 aaKnown RBP6.91□□□□□ -1.3
HMGCL-204ENST00000436439 GAGE2BQ13066 116 aa6.91□□□□□ -1.3
HMGCL-204ENST00000436439 S100A7L2Q5SY68 101 aa6.91□□□□□ -1.3
HMGCL-204ENST00000436439 SIGMAR1Q99720 223 aa6.91□□□□□ -1.3
HMGCL-204ENST00000436439 HMCN2Q8NDA2 5059 aa6.9□□□□□ -1.3
HMGCL-204ENST00000436439 A0A087WYN8 130 aa6.9□□□□□ -1.31
HMGCL-204ENST00000436439 PANO1I0J062 215 aa6.9□□□□□ -1.31
HMGCL-204ENST00000436439 CDIP1Q9H305 208 aa6.9□□□□□ -1.31
HMGCL-204ENST00000436439 SNCGO76070 127 aa6.89□□□□□ -1.31
HMGCL-204ENST00000436439 OXTP01178 125 aa6.89□□□□□ -1.31
HMGCL-204ENST00000436439 IGLV6-57P01721 117 aa6.89□□□□□ -1.31
HMGCL-204ENST00000436439 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.89□□□□□ -1.31
HMGCL-204ENST00000436439 FAM240AA0A1B0GVK7 77 aa6.88□□□□□ -1.31
HMGCL-204ENST00000436439 M0R378 163 aa6.88□□□□□ -1.31
HMGCL-204ENST00000436439 RPL37AP61513 92 aaKnown RBP6.88□□□□□ -1.31
HMGCL-204ENST00000436439 LINC00167Q96N53 147 aa6.88□□□□□ -1.31
HMGCL-204ENST00000436439 SCGB1A1P11684 91 aa6.87□□□□□ -1.31
HMGCL-204ENST00000436439 SERTAD4-AS1Q5TG53 156 aa6.87□□□□□ -1.31
HMGCL-204ENST00000436439 KRTAP7-1Q8IUC3 87 aa6.87□□□□□ -1.31
HMGCL-204ENST00000436439 NKAPP1Q8N9T2 125 aa6.87□□□□□ -1.31
HMGCL-204ENST00000436439 SPACA4Q8TDM5 124 aa6.87□□□□□ -1.31
HMGCL-204ENST00000436439 IGKV2-24A0A0C4DH68 120 aa6.86□□□□□ -1.31
HMGCL-204ENST00000436439 FAM168BA1KXE4 195 aa6.86□□□□□ -1.31
HMGCL-204ENST00000436439 PCP4P48539 62 aa6.86□□□□□ -1.31
HMGCL-204ENST00000436439 C6orf99Q4VX62 202 aa6.86□□□□□ -1.31
HMGCL-204ENST00000436439 ORMDL1Q9P0S3 153 aa6.86□□□□□ -1.31
HMGCL-204ENST00000436439 C22orf24Q9Y442 160 aa6.86□□□□□ -1.31
HMGCL-204ENST00000436439 ACYP1P07311 99 aa6.85□□□□□ -1.31
HMGCL-204ENST00000436439 CHTF8P0CG12 524 aa6.85□□□□□ -1.31
HMGCL-204ENST00000436439 UBR4Q5T4S7 5183 aa6.84□□□□□ -1.31
HMGCL-204ENST00000436439 TRBV7-6A0A0J9YX20 115 aa6.84□□□□□ -1.31
HMGCL-204ENST00000436439 A0A1W2PNN7 141 aa6.84□□□□□ -1.31
HMGCL-204ENST00000436439 LINC00575Q6W349 94 aa6.84□□□□□ -1.31
HMGCL-204ENST00000436439 MRPL55Q7Z7F7 128 aaKnown RBP6.84□□□□□ -1.31
HMGCL-204ENST00000436439 TRAV23DV6A0A075B6W5 121 aa6.83□□□□□ -1.32
HMGCL-204ENST00000436439 TRBV10-3A0A0K0K1G6 114 aa6.83□□□□□ -1.32
HMGCL-204ENST00000436439 H3BQ85 93 aa6.83□□□□□ -1.32
HMGCL-204ENST00000436439 FAM19A5Q7Z5A7 132 aaPredicted RBP6.83□□□□□ -1.32
HMGCL-204ENST00000436439 C7orf33Q8WU49 177 aa6.83□□□□□ -1.32
HMGCL-204ENST00000436439 DIRC1Q969H9 104 aa6.83□□□□□ -1.32
HMGCL-204ENST00000436439 OBSCN-AS1Q96MR7 158 aa6.83□□□□□ -1.32
HMGCL-204ENST00000436439 IGLV1-50A0A075B6I6 118 aa6.82□□□□□ -1.32
HMGCL-204ENST00000436439 TMEM256-PLSCR3K7ERE1 68 aa6.82□□□□□ -1.32
HMGCL-204ENST00000436439 MT1HL1P0DM35 61 aa6.82□□□□□ -1.32
HMGCL-204ENST00000436439 KCNQ1DNQ9H478 68 aa6.82□□□□□ -1.32
HMGCL-204ENST00000436439 PLAC8Q9NZF1 115 aa6.82□□□□□ -1.32
HMGCL-204ENST00000436439 hADV29S1A0JD25 119 aa6.81□□□□□ -1.32
HMGCL-204ENST00000436439 ZNF73O43830 326 aaPredicted RBP6.81□□□□□ -1.32
HMGCL-204ENST00000436439 JMJD7-PLA2G4BH0Y9G9 81 aa6.8□□□□□ -1.32
HMGCL-204ENST00000436439 PRYO14603 147 aa6.8□□□□□ -1.32
HMGCL-204ENST00000436439 MT-ATP8P03928 68 aa6.8□□□□□ -1.32
HMGCL-204ENST00000436439 COX7BP24311 80 aa6.8□□□□□ -1.32
HMGCL-204ENST00000436439 GHRHP01286 108 aa6.79□□□□□ -1.32
HMGCL-204ENST00000436439 ELOF1P60002 83 aaKnown RBP6.79□□□□□ -1.32
HMGCL-204ENST00000436439 DPH3Q96FX2 82 aa6.79□□□□□ -1.32
HMGCL-204ENST00000436439 SPRR1AP35321 89 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms