RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 ATOX1O00244 68 aa10.81□□□□□ -0.68
USHBP1-203ENST00000431146 NBDYA0A0U1RRE5 68 aa10.8□□□□□ -0.68
USHBP1-203ENST00000431146 TLX1NBP0CAT3 122 aa10.8□□□□□ -0.68
USHBP1-203ENST00000431146 FAM168BA1KXE4 195 aa10.79□□□□□ -0.68
USHBP1-203ENST00000431146 M0R378 163 aa10.79□□□□□ -0.68
USHBP1-203ENST00000431146 M0R2N4 97 aa10.79□□□□□ -0.68
USHBP1-203ENST00000431146 HIST1H4AP62805 103 aaKnown RBP10.79□□□□□ -0.68
USHBP1-203ENST00000431146 LINC00643Q86TS7 51 aa10.79□□□□□ -0.68
USHBP1-203ENST00000431146 Q8N814 137 aa10.79□□□□□ -0.68
USHBP1-203ENST00000431146 KMT2AQ03164 3969 aa10.78□□□□□ -0.68
USHBP1-203ENST00000431146 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.78□□□□□ -0.68
USHBP1-203ENST00000431146 KRTAP21-3Q3LHN1 58 aa10.77□□□□□ -0.69
USHBP1-203ENST00000431146 ZNF73O43830 326 aaPredicted RBP10.76□□□□□ -0.69
USHBP1-203ENST00000431146 hADV29S1A0JD25 119 aa10.76□□□□□ -0.69
USHBP1-203ENST00000431146 LINC00575Q6W349 94 aa10.76□□□□□ -0.69
USHBP1-203ENST00000431146 NKAPP1Q8N9T2 125 aa10.76□□□□□ -0.69
USHBP1-203ENST00000431146 DIRC1Q969H9 104 aa10.76□□□□□ -0.69
USHBP1-203ENST00000431146 SDIM1Q6ZPB5 146 aa10.75□□□□□ -0.69
USHBP1-203ENST00000431146 LINC00336Q6ZUF6 198 aa10.75□□□□□ -0.69
USHBP1-203ENST00000431146 ORMDL1Q9P0S3 153 aa10.75□□□□□ -0.69
USHBP1-203ENST00000431146 KRTAP7-1Q8IUC3 87 aa10.73□□□□□ -0.69
USHBP1-203ENST00000431146 C7orf33Q8WU49 177 aa10.73□□□□□ -0.69
USHBP1-203ENST00000431146 LINC00167Q96N53 147 aa10.73□□□□□ -0.69
USHBP1-203ENST00000431146 DSCR8Q96T75 97 aa10.72□□□□□ -0.69
USHBP1-203ENST00000431146 EPM2AB3EWF7 344 aa10.72□□□□□ -0.69
USHBP1-203ENST00000431146 RPL37AP8A6NKH3 93 aa10.71□□□□□ -0.69
USHBP1-203ENST00000431146 Q6ZRN7 208 aaPredicted RBP10.71□□□□□ -0.69
USHBP1-203ENST00000431146 IGKV2-24A0A0C4DH68 120 aa10.7□□□□□ -0.7
USHBP1-203ENST00000431146 LRCOL1A6NCL2 159 aa10.7□□□□□ -0.7
USHBP1-203ENST00000431146 CNBPP62633 177 aaKnown RBP10.7□□□□□ -0.7
USHBP1-203ENST00000431146 C1orf195Q5TG92 126 aa10.7□□□□□ -0.7
USHBP1-203ENST00000431146 PKIGQ9Y2B9 76 aa10.7□□□□□ -0.7
USHBP1-203ENST00000431146 COX7BP24311 80 aa10.7□□□□□ -0.7
USHBP1-203ENST00000431146 A0A096LNI7 61 aa10.69□□□□□ -0.7
USHBP1-203ENST00000431146 ELOF1P60002 83 aaKnown RBP10.69□□□□□ -0.7
USHBP1-203ENST00000431146 PLA2G2DQ9UNK4 145 aa10.69□□□□□ -0.7
USHBP1-203ENST00000431146 DNAH2Q9P225 4427 aa10.68□□□□□ -0.7
USHBP1-203ENST00000431146 SERP2Q8N6R1 65 aa10.68□□□□□ -0.7
USHBP1-203ENST00000431146 C14orf177Q52M58 125 aa10.67□□□□□ -0.7
USHBP1-203ENST00000431146 Q6ZQY7 126 aa10.67□□□□□ -0.7
USHBP1-203ENST00000431146 CYSTM1Q9H1C7 97 aa10.67□□□□□ -0.7
USHBP1-203ENST00000431146 C14orf132Q9NPU4 83 aa10.67□□□□□ -0.7
USHBP1-203ENST00000431146 KCNQ1DNQ9H478 68 aa10.66□□□□□ -0.7
USHBP1-203ENST00000431146 IGLV5-37A0A075B6J1 123 aa10.66□□□□□ -0.7
USHBP1-203ENST00000431146 FAM236DA0A1B0GTK5 79 aa10.64□□□□□ -0.71
USHBP1-203ENST00000431146 C16orf90A8MZG2 172 aa10.64□□□□□ -0.71
USHBP1-203ENST00000431146 TMEM256-PLSCR3K7ERE1 68 aa10.64□□□□□ -0.71
USHBP1-203ENST00000431146 FAM236CP0DP71 79 aa10.64□□□□□ -0.71
USHBP1-203ENST00000431146 MRPL55Q7Z7F7 128 aaKnown RBP10.64□□□□□ -0.71
USHBP1-203ENST00000431146 IGLV1-50A0A075B6I6 118 aa10.64□□□□□ -0.71
USHBP1-203ENST00000431146 TRBV7-6A0A0J9YX20 115 aa10.64□□□□□ -0.71
USHBP1-203ENST00000431146 CHTF8P0CG12 524 aa10.64□□□□□ -0.71
USHBP1-203ENST00000431146 LINC00528Q8N1L1 170 aa10.64□□□□□ -0.71
USHBP1-203ENST00000431146 INAFM2P0DMQ5 153 aa10.63□□□□□ -0.71
USHBP1-203ENST00000431146 SMCR5Q8TEV8 140 aa10.63□□□□□ -0.71
USHBP1-203ENST00000431146 OBSCN-AS1Q96MR7 158 aa10.63□□□□□ -0.71
USHBP1-203ENST00000431146 A0A1W2PNN7 141 aa10.63□□□□□ -0.71
USHBP1-203ENST00000431146 FUSP35637 526 aaKnown RBP eCLIP10.61□□□□□ -0.71
USHBP1-203ENST00000431146 SERP1Q9Y6X1 66 aa10.61□□□□□ -0.71
USHBP1-203ENST00000431146 LY6G6CO95867 125 aa10.61□□□□□ -0.71
USHBP1-203ENST00000431146 Q6ZR54 194 aa10.6□□□□□ -0.71
USHBP1-203ENST00000431146 C9orf163Q8N9P6 203 aa10.6□□□□□ -0.71
USHBP1-203ENST00000431146 HECTD4Q9Y4D8 3996 aa10.6□□□□□ -0.71
USHBP1-203ENST00000431146 PRYO14603 147 aa10.58□□□□□ -0.72
USHBP1-203ENST00000431146 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.58□□□□□ -0.72
USHBP1-203ENST00000431146 LAMTOR3Q9UHA4 124 aa10.58□□□□□ -0.72
USHBP1-203ENST00000431146 A0A087WTM6 91 aa10.57□□□□□ -0.72
USHBP1-203ENST00000431146 KRTAP4-16G5E9R7 235 aaPredicted RBP10.57□□□□□ -0.72
USHBP1-203ENST00000431146 WWC2-AS2Q96NR7 200 aa10.57□□□□□ -0.72
USHBP1-203ENST00000431146 ETDCA0A1B0GVM5 59 aa10.56□□□□□ -0.72
USHBP1-203ENST00000431146 JMJD7-PLA2G4BH0Y9G9 81 aa10.55□□□□□ -0.72
USHBP1-203ENST00000431146 PANO1I0J062 215 aa10.55□□□□□ -0.72
USHBP1-203ENST00000431146 SPRR1AP35321 89 aa10.55□□□□□ -0.72
USHBP1-203ENST00000431146 SMIM26A0A096LP01 95 aa10.55□□□□□ -0.72
USHBP1-203ENST00000431146 Q6ZRX8 168 aa10.55□□□□□ -0.72
USHBP1-203ENST00000431146 Q9BRP9 147 aa10.55□□□□□ -0.72
USHBP1-203ENST00000431146 REG3GQ6UW15 175 aa10.53□□□□□ -0.72
USHBP1-203ENST00000431146 PHF5AQ7RTV0 110 aaKnown RBP10.53□□□□□ -0.72
USHBP1-203ENST00000431146 DEFB105AQ8NG35 78 aa10.52□□□□□ -0.72
USHBP1-203ENST00000431146 C1orf134Q5TEV5 83 aa10.52□□□□□ -0.73
USHBP1-203ENST00000431146 DNAH17Q9UFH2 4485 aa10.51□□□□□ -0.73
USHBP1-203ENST00000431146 RBM3P98179 157 aaKnown RBP10.51□□□□□ -0.73
USHBP1-203ENST00000431146 FAM19A1Q7Z5A9 133 aa10.51□□□□□ -0.73
USHBP1-203ENST00000431146 LINC00476Q8WZB0 136 aa10.51□□□□□ -0.73
USHBP1-203ENST00000431146 KRTAP11-1Q8IUC1 163 aa10.51□□□□□ -0.73
USHBP1-203ENST00000431146 CCKP06307 115 aa10.5□□□□□ -0.73
USHBP1-203ENST00000431146 DNAH6Q9C0G6 4158 aa10.49□□□□□ -0.73
USHBP1-203ENST00000431146 UBE2BP63146 152 aa10.49□□□□□ -0.73
USHBP1-203ENST00000431146 Q6JHZ5 121 aa10.49□□□□□ -0.73
USHBP1-203ENST00000431146 DHRS4-AS1Q9P1J3 65 aa10.49□□□□□ -0.73
USHBP1-203ENST00000431146 HYDINQ4G0P3 5121 aa10.49□□□□□ -0.73
USHBP1-203ENST00000431146 ERC2-IT1O76042 136 aa10.48□□□□□ -0.73
USHBP1-203ENST00000431146 ST20-AS1Q8NBB2 130 aa10.48□□□□□ -0.73
USHBP1-203ENST00000431146 LINC00846Q9NV44 126 aa10.48□□□□□ -0.73
USHBP1-203ENST00000431146 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.48□□□□□ -0.73
USHBP1-203ENST00000431146 H3BQ85 93 aa10.48□□□□□ -0.73
USHBP1-203ENST00000431146 RTL8CO15255 209 aa10.48□□□□□ -0.73
USHBP1-203ENST00000431146 ALMS1Q8TCU4 4167 aa10.47□□□□□ -0.73
USHBP1-203ENST00000431146 FRAS1Q86XX4 4008 aa10.47□□□□□ -0.73
USHBP1-203ENST00000431146 PRLHP81277 87 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms