RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 ELOF1P60002 83 aaKnown RBP8.83□□□□□ -1
SNRNP200-202ENST00000429650 KRTAP10-11P60412 298 aa8.83□□□□□ -1
SNRNP200-202ENST00000429650 UPK3BQ9BT76 320 aa8.83□□□□□ -1
SNRNP200-202ENST00000429650 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.82□□□□□ -1
SNRNP200-202ENST00000429650 ESRGQ1W209 222 aa8.81□□□□□ -1
SNRNP200-202ENST00000429650 TRBV7-6A0A0J9YX20 115 aa8.81□□□□□ -1
SNRNP200-202ENST00000429650 PDE6GP18545 87 aa8.81□□□□□ -1
SNRNP200-202ENST00000429650 NDUFC2-KCTD14E9PQ53 114 aa8.8□□□□□ -1
SNRNP200-202ENST00000429650 M0R378 163 aa8.8□□□□□ -1
SNRNP200-202ENST00000429650 GHRHP01286 108 aa8.79□□□□□ -1
SNRNP200-202ENST00000429650 Q6ZVQ6 151 aa8.79□□□□□ -1
SNRNP200-202ENST00000429650 COL6A5A8TX70 2615 aa8.78□□□□□ -1
SNRNP200-202ENST00000429650 TRBV7-4A0A0J9YYF1 115 aa8.78□□□□□ -1
SNRNP200-202ENST00000429650 LINC01547P58512 204 aaPredicted RBP8.78□□□□□ -1
SNRNP200-202ENST00000429650 EPM2AB3EWF7 344 aa8.77□□□□□ -1.01
SNRNP200-202ENST00000429650 NBEAL1Q6ZS30 2694 aa8.77□□□□□ -1.01
SNRNP200-202ENST00000429650 LINC01556Q5JQF7 62 aa8.77□□□□□ -1.01
SNRNP200-202ENST00000429650 Q6ZRP5 223 aa8.77□□□□□ -1.01
SNRNP200-202ENST00000429650 LINC00528Q8N1L1 170 aa8.76□□□□□ -1.01
SNRNP200-202ENST00000429650 IGKV2D-24A0A075B6R9 120 aa8.76□□□□□ -1.01
SNRNP200-202ENST00000429650 HAMPP81172 84 aa8.76□□□□□ -1.01
SNRNP200-202ENST00000429650 DEFB131BA0A096LNP1 70 aa8.74□□□□□ -1.01
SNRNP200-202ENST00000429650 CSMD3Q7Z407 3707 aa8.73□□□□□ -1.01
SNRNP200-202ENST00000429650 SYCNQ0VAF6 134 aa8.73□□□□□ -1.01
SNRNP200-202ENST00000429650 RBM12B-AS1Q9P1G2 102 aa8.73□□□□□ -1.01
SNRNP200-202ENST00000429650 CXCL6P80162 114 aa8.73□□□□□ -1.01
SNRNP200-202ENST00000429650 CMYA5Q8N3K9 4069 aa8.72□□□□□ -1.01
SNRNP200-202ENST00000429650 LYSTQ99698 3801 aa8.72□□□□□ -1.01
SNRNP200-202ENST00000429650 SMIM26A0A096LP01 95 aa8.71□□□□□ -1.01
SNRNP200-202ENST00000429650 PRB2P02812 416 aaPredicted RBP8.71□□□□□ -1.02
SNRNP200-202ENST00000429650 PRR15Q8IV56 129 aa8.71□□□□□ -1.02
SNRNP200-202ENST00000429650 BAHCC1Q9P281 2608 aa8.7□□□□□ -1.02
SNRNP200-202ENST00000429650 BCE1O60756 84 aa8.7□□□□□ -1.02
SNRNP200-202ENST00000429650 SERP1Q9Y6X1 66 aa8.7□□□□□ -1.02
SNRNP200-202ENST00000429650 DNAH10OSP0CZ25 163 aa8.69□□□□□ -1.02
SNRNP200-202ENST00000429650 KCNQ1DNQ9H478 68 aa8.68□□□□□ -1.02
SNRNP200-202ENST00000429650 KRTAP24-1Q3LI83 254 aa8.68□□□□□ -1.02
SNRNP200-202ENST00000429650 FP248Q71RG6 208 aaPredicted RBP8.68□□□□□ -1.02
SNRNP200-202ENST00000429650 NKAPP1Q8N9T2 125 aa8.68□□□□□ -1.02
SNRNP200-202ENST00000429650 TRAV10A0A0B4J240 114 aa8.67□□□□□ -1.02
SNRNP200-202ENST00000429650 C20orf197Q8N268 126 aa8.67□□□□□ -1.02
SNRNP200-202ENST00000429650 C7orf33Q8WU49 177 aa8.67□□□□□ -1.02
SNRNP200-202ENST00000429650 TRAV7A0A075B6U4 112 aa8.67□□□□□ -1.02
SNRNP200-202ENST00000429650 SCXQ7RTU7 201 aa8.67□□□□□ -1.02
SNRNP200-202ENST00000429650 MGAM2Q2M2H8 2515 aa8.66□□□□□ -1.02
SNRNP200-202ENST00000429650 DNAH3Q8TD57 4116 aa8.65□□□□□ -1.02
SNRNP200-202ENST00000429650 TLX1NBP0CAT3 122 aa8.65□□□□□ -1.02
SNRNP200-202ENST00000429650 C8orf87E5RJ46 101 aa8.64□□□□□ -1.03
SNRNP200-202ENST00000429650 DNAH1Q9P2D7 4330 aa8.64□□□□□ -1.03
SNRNP200-202ENST00000429650 PLA2G2DQ9UNK4 145 aa8.64□□□□□ -1.03
SNRNP200-202ENST00000429650 Q8N377 158 aa8.63□□□□□ -1.03
SNRNP200-202ENST00000429650 LINC00588Q9Y4M8 146 aa8.63□□□□□ -1.03
SNRNP200-202ENST00000429650 CASC10Q5T4H9 136 aa8.62□□□□□ -1.03
SNRNP200-202ENST00000429650 DEFB105AQ8NG35 78 aa8.62□□□□□ -1.03
SNRNP200-202ENST00000429650 FAM168BA1KXE4 195 aa8.61□□□□□ -1.03
SNRNP200-202ENST00000429650 TENM2Q9NT68 2774 aa8.6□□□□□ -1.03
SNRNP200-202ENST00000429650 RPL37AP8A6NKH3 93 aa8.6□□□□□ -1.03
SNRNP200-202ENST00000429650 Q6ZRX8 168 aa8.6□□□□□ -1.03
SNRNP200-202ENST00000429650 IGLV5-37A0A075B6J1 123 aa8.6□□□□□ -1.03
SNRNP200-202ENST00000429650 KRTAP4-16G5E9R7 235 aaPredicted RBP8.6□□□□□ -1.03
SNRNP200-202ENST00000429650 IGLV1-50A0A075B6I6 118 aa8.59□□□□□ -1.03
SNRNP200-202ENST00000429650 IGLV5-48A0A075B6I7 105 aa8.59□□□□□ -1.03
SNRNP200-202ENST00000429650 DHRS4-AS1Q9P1J3 65 aa8.59□□□□□ -1.03
SNRNP200-202ENST00000429650 H7BZZ5 65 aa8.59□□□□□ -1.03
SNRNP200-202ENST00000429650 PRYO14603 147 aa8.59□□□□□ -1.03
SNRNP200-202ENST00000429650 KLKP1Q107X0 134 aa8.59□□□□□ -1.03
SNRNP200-202ENST00000429650 NREPQ16612 68 aa8.59□□□□□ -1.03
SNRNP200-202ENST00000429650 Q9BRP9 147 aa8.59□□□□□ -1.03
SNRNP200-202ENST00000429650 SPRR1AP35321 89 aa8.58□□□□□ -1.04
SNRNP200-202ENST00000429650 KRTAP7-1Q8IUC3 87 aa8.58□□□□□ -1.04
SNRNP200-202ENST00000429650 TM2D3Q9BRN9 247 aa8.58□□□□□ -1.04
SNRNP200-202ENST00000429650 C3orf84H3BNL1 204 aa8.58□□□□□ -1.04
SNRNP200-202ENST00000429650 Q8N9L7 120 aa8.58□□□□□ -1.04
SNRNP200-202ENST00000429650 IGKV4-1P06312 121 aa8.57□□□□□ -1.04
SNRNP200-202ENST00000429650 ETDCA0A1B0GVM5 59 aa8.56□□□□□ -1.04
SNRNP200-202ENST00000429650 SNURFQ9Y675 71 aa8.56□□□□□ -1.04
SNRNP200-202ENST00000429650 HUWE1Q7Z6Z7 4374 aaKnown RBP8.56□□□□□ -1.04
SNRNP200-202ENST00000429650 COL7A1Q02388 2944 aa8.56□□□□□ -1.04
SNRNP200-202ENST00000429650 STAB2Q8WWQ8 2551 aa8.56□□□□□ -1.04
SNRNP200-202ENST00000429650 DNAH10Q8IVF4 4471 aa8.56□□□□□ -1.04
SNRNP200-202ENST00000429650 BPY2O14599 106 aa8.55□□□□□ -1.04
SNRNP200-202ENST00000429650 RMI2Q96E14 147 aa8.55□□□□□ -1.04
SNRNP200-202ENST00000429650 TNP2Q05952 138 aa8.54□□□□□ -1.04
SNRNP200-202ENST00000429650 ST20-AS1Q8NBB2 130 aa8.54□□□□□ -1.04
SNRNP200-202ENST00000429650 A0A1W2PNM2 257 aa8.53□□□□□ -1.04
SNRNP200-202ENST00000429650 KTN1-AS1Q86SY8 53 aa8.53□□□□□ -1.04
SNRNP200-202ENST00000429650 FUSP35637 526 aaKnown RBP eCLIP8.52□□□□□ -1.04
SNRNP200-202ENST00000429650 A0A0A0MQY5 61 aa8.51□□□□□ -1.05
SNRNP200-202ENST00000429650 A0A1B0GW54 56 aa8.51□□□□□ -1.05
SNRNP200-202ENST00000429650 ERC2-IT1O76042 136 aa8.51□□□□□ -1.05
SNRNP200-202ENST00000429650 C1orf137Q5JT78 98 aa8.51□□□□□ -1.05
SNRNP200-202ENST00000429650 LINC00474Q9P2X8 69 aa8.5□□□□□ -1.05
SNRNP200-202ENST00000429650 F8WEM9 126 aa8.5□□□□□ -1.05
SNRNP200-202ENST00000429650 Q8NBF4 154 aa8.49□□□□□ -1.05
SNRNP200-202ENST00000429650 UBE2BP63146 152 aa8.49□□□□□ -1.05
SNRNP200-202ENST00000429650 OCR1Q9BZK8 76 aa8.49□□□□□ -1.05
SNRNP200-202ENST00000429650 K7EIL1 84 aa8.48□□□□□ -1.05
SNRNP200-202ENST00000429650 NDUFC1O43677 76 aa8.48□□□□□ -1.05
SNRNP200-202ENST00000429650 REG3GQ6UW15 175 aa8.48□□□□□ -1.05
SNRNP200-202ENST00000429650 TMEM254Q8TBM7 123 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms