RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 SPINK1P00995 79 aa11.26□□□□□ -0.61
SMARCA4-203ENST00000429416 PCOTHQ58A44 107 aa11.26□□□□□ -0.61
SMARCA4-203ENST00000429416 TRBV7-6A0A0J9YX20 115 aa11.26□□□□□ -0.61
SMARCA4-203ENST00000429416 FLNCQ14315 2725 aa11.25□□□□□ -0.61
SMARCA4-203ENST00000429416 ZNF575Q86XF7 245 aa11.25□□□□□ -0.61
SMARCA4-203ENST00000429416 UQCRQO14949 82 aa11.25□□□□□ -0.61
SMARCA4-203ENST00000429416 WIPF1O43516 503 aa11.22□□□□□ -0.61
SMARCA4-203ENST00000429416 SERP2Q8N6R1 65 aa11.22□□□□□ -0.61
SMARCA4-203ENST00000429416 SPTSSBQ8NFR3 76 aa11.22□□□□□ -0.61
SMARCA4-203ENST00000429416 IGLV1-50A0A075B6I6 118 aa11.22□□□□□ -0.61
SMARCA4-203ENST00000429416 IMUPQ9GZP8 106 aa11.22□□□□□ -0.61
SMARCA4-203ENST00000429416 FRYQ5TBA9 3013 aa11.21□□□□□ -0.61
SMARCA4-203ENST00000429416 VCANP13611 3396 aa11.21□□□□□ -0.61
SMARCA4-203ENST00000429416 FAM218AQ96MZ4 157 aa11.21□□□□□ -0.62
SMARCA4-203ENST00000429416 LINC00528Q8N1L1 170 aa11.21□□□□□ -0.62
SMARCA4-203ENST00000429416 TNRC18O15417 2968 aaPredicted RBP11.2□□□□□ -0.62
SMARCA4-203ENST00000429416 MPLKIPQ8TAP9 179 aa11.2□□□□□ -0.62
SMARCA4-203ENST00000429416 K7ERS5 55 aa11.2□□□□□ -0.62
SMARCA4-203ENST00000429416 LINC00846Q9NV44 126 aa11.2□□□□□ -0.62
SMARCA4-203ENST00000429416 CELSR3Q9NYQ7 3312 aa11.2□□□□□ -0.62
SMARCA4-203ENST00000429416 ZNF861PO60384 105 aa11.2□□□□□ -0.62
SMARCA4-203ENST00000429416 CDIP1Q9H305 208 aa11.19□□□□□ -0.62
SMARCA4-203ENST00000429416 FAM240AA0A1B0GVK7 77 aa11.18□□□□□ -0.62
SMARCA4-203ENST00000429416 H0Y9P7 68 aa11.17□□□□□ -0.62
SMARCA4-203ENST00000429416 C9orf129Q5T035 196 aaKnown RBP11.17□□□□□ -0.62
SMARCA4-203ENST00000429416 LINC00304Q8N9R0 145 aa11.17□□□□□ -0.62
SMARCA4-203ENST00000429416 ATMQ13315 3056 aa11.17□□□□□ -0.62
SMARCA4-203ENST00000429416 PRR15LQ9BU68 103 aa11.16□□□□□ -0.62
SMARCA4-203ENST00000429416 IGLV6-57P01721 117 aa11.16□□□□□ -0.62
SMARCA4-203ENST00000429416 COL12A1Q99715 3063 aa11.15□□□□□ -0.62
SMARCA4-203ENST00000429416 LINC00313P59037 77 aa11.15□□□□□ -0.62
SMARCA4-203ENST00000429416 Q96NJ1 140 aa11.15□□□□□ -0.62
SMARCA4-203ENST00000429416 ANAPC11Q9NYG5 84 aa11.15□□□□□ -0.62
SMARCA4-203ENST00000429416 LAMA1P25391 3075 aa11.15□□□□□ -0.62
SMARCA4-203ENST00000429416 A0A1W2PNN7 141 aa11.14□□□□□ -0.63
SMARCA4-203ENST00000429416 ATP11AUNQ6ZP68 121 aa11.14□□□□□ -0.63
SMARCA4-203ENST00000429416 PSORS1C2Q9UIG4 136 aa11.14□□□□□ -0.63
SMARCA4-203ENST00000429416 KCNQ1DNQ9H478 68 aa11.13□□□□□ -0.63
SMARCA4-203ENST00000429416 TACC2O95359 2948 aa11.13□□□□□ -0.63
SMARCA4-203ENST00000429416 NDUFC1O43677 76 aa11.13□□□□□ -0.63
SMARCA4-203ENST00000429416 hDV103S1A0JD37 113 aa11.12□□□□□ -0.63
SMARCA4-203ENST00000429416 DMXL2Q8TDJ6 3036 aa11.12□□□□□ -0.63
SMARCA4-203ENST00000429416 IGLV7-43P04211 117 aa11.11□□□□□ -0.63
SMARCA4-203ENST00000429416 CNBPP62633 177 aaKnown RBP11.11□□□□□ -0.63
SMARCA4-203ENST00000429416 COX6B2Q6YFQ2 88 aa11.1□□□□□ -0.63
SMARCA4-203ENST00000429416 LITAFQ99732 161 aa11.09□□□□□ -0.63
SMARCA4-203ENST00000429416 TRAV7A0A075B6U4 112 aa11.09□□□□□ -0.63
SMARCA4-203ENST00000429416 ITPR1Q14643 2758 aa11.09□□□□□ -0.63
SMARCA4-203ENST00000429416 ITPR2Q14571 2701 aa11.08□□□□□ -0.64
SMARCA4-203ENST00000429416 TLX1NBP0CAT3 122 aa11.07□□□□□ -0.64
SMARCA4-203ENST00000429416 COX7CP15954 63 aa11.06□□□□□ -0.64
SMARCA4-203ENST00000429416 SMIM29Q86T20 159 aa11.05□□□□□ -0.64
SMARCA4-203ENST00000429416 SPAG11AQ6PDA7 123 aa11.05□□□□□ -0.64
SMARCA4-203ENST00000429416 C9orf92A6NGG3 77 aa11.04□□□□□ -0.64
SMARCA4-203ENST00000429416 C1orf64Q8NEQ6 169 aa11.04□□□□□ -0.64
SMARCA4-203ENST00000429416 NSD1Q96L73 2696 aaPredicted RBP11.04□□□□□ -0.64
SMARCA4-203ENST00000429416 BOD1L1Q8NFC6 3051 aa11.04□□□□□ -0.64
SMARCA4-203ENST00000429416 EIF4EBP3O60516 100 aaPredicted RBP11.03□□□□□ -0.64
SMARCA4-203ENST00000429416 C7orf65Q6ZTY9 151 aa11.03□□□□□ -0.64
SMARCA4-203ENST00000429416 SSBP3-AS1Q7Z2R9 100 aa11.03□□□□□ -0.64
SMARCA4-203ENST00000429416 CXCL6P80162 114 aa11.02□□□□□ -0.64
SMARCA4-203ENST00000429416 Q6ZQT0 140 aa11.01□□□□□ -0.65
SMARCA4-203ENST00000429416 ATP5EP56381 51 aaPredicted RBP10.99□□□□□ -0.65
SMARCA4-203ENST00000429416 A0A0G2JQZ4 141 aa10.98□□□□□ -0.65
SMARCA4-203ENST00000429416 A0A1B0GW54 56 aa10.98□□□□□ -0.65
SMARCA4-203ENST00000429416 BRK1Q8WUW1 75 aa10.98□□□□□ -0.65
SMARCA4-203ENST00000429416 PLA2G2DQ9UNK4 145 aa10.98□□□□□ -0.65
SMARCA4-203ENST00000429416 TRBV7-7A0A0K0K1E9 115 aa10.97□□□□□ -0.65
SMARCA4-203ENST00000429416 TRBV7-4A0A0J9YYF1 115 aa10.97□□□□□ -0.65
SMARCA4-203ENST00000429416 TP53AIP1Q9HCN2 124 aa10.97□□□□□ -0.65
SMARCA4-203ENST00000429416 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.97□□□□□ -0.65
SMARCA4-203ENST00000429416 HIVEP1P15822 2718 aa10.96□□□□□ -0.65
SMARCA4-203ENST00000429416 IGFL1Q6UW32 110 aa10.96□□□□□ -0.66
SMARCA4-203ENST00000429416 OBSCN-AS1Q96MR7 158 aa10.95□□□□□ -0.66
SMARCA4-203ENST00000429416 LCE6AA0A183 80 aa10.95□□□□□ -0.66
SMARCA4-203ENST00000429416 A6NED7 52 aa10.95□□□□□ -0.66
SMARCA4-203ENST00000429416 CCDC179H3BU77 68 aa10.95□□□□□ -0.66
SMARCA4-203ENST00000429416 TMEM254Q8TBM7 123 aa10.94□□□□□ -0.66
SMARCA4-203ENST00000429416 V9GYY9 64 aa10.94□□□□□ -0.66
SMARCA4-203ENST00000429416 LOC110117498A0A087WWA1 95 aa10.94□□□□□ -0.66
SMARCA4-203ENST00000429416 NBEAL2Q6ZNJ1 2754 aa10.94□□□□□ -0.66
SMARCA4-203ENST00000429416 DSCR10P59022 87 aa10.93□□□□□ -0.66
SMARCA4-203ENST00000429416 SPRR4Q96PI1 79 aa10.92□□□□□ -0.66
SMARCA4-203ENST00000429416 EYSQ5T1H1 3165 aa10.92□□□□□ -0.66
SMARCA4-203ENST00000429416 ERC2-IT1O76042 136 aa10.91□□□□□ -0.66
SMARCA4-203ENST00000429416 Q8N377 158 aa10.91□□□□□ -0.66
SMARCA4-203ENST00000429416 DNAH14Q0VDD8 3507 aa10.9□□□□□ -0.66
SMARCA4-203ENST00000429416 STAB2Q8WWQ8 2551 aa10.9□□□□□ -0.66
SMARCA4-203ENST00000429416 C8orf87E5RJ46 101 aa10.9□□□□□ -0.66
SMARCA4-203ENST00000429416 SMCPP49901 116 aaPredicted RBP10.9□□□□□ -0.66
SMARCA4-203ENST00000429416 FREM2Q5SZK8 3169 aa10.89□□□□□ -0.67
SMARCA4-203ENST00000429416 SVIPQ8NHG7 77 aa10.88□□□□□ -0.67
SMARCA4-203ENST00000429416 A8MWP4 228 aa10.88□□□□□ -0.67
SMARCA4-203ENST00000429416 PRR26Q8N8Z3 221 aa10.86□□□□□ -0.67
SMARCA4-203ENST00000429416 ADGRG4Q8IZF6 3080 aa10.85□□□□□ -0.67
SMARCA4-203ENST00000429416 DMXL1Q9Y485 3027 aa10.85□□□□□ -0.67
SMARCA4-203ENST00000429416 UTP20O75691 2785 aaKnown RBP10.85□□□□□ -0.67
SMARCA4-203ENST00000429416 NBEAQ8NFP9 2946 aa10.85□□□□□ -0.67
SMARCA4-203ENST00000429416 ZZEF1O43149 2961 aa10.84□□□□□ -0.67
SMARCA4-203ENST00000429416 TENM4Q6N022 2769 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms