RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.11□□□□□ -1.43
HMGCLL1-206ENST00000428842 VPS13BQ7Z7G8 4022 aa6.11□□□□□ -1.43
HMGCLL1-206ENST00000428842 C9orf129Q5T035 196 aaKnown RBP6.1□□□□□ -1.43
HMGCLL1-206ENST00000428842 FAM30AQ9NZY2 134 aa6.1□□□□□ -1.43
HMGCLL1-206ENST00000428842 TRBV7-7A0A0K0K1E9 115 aa6.1□□□□□ -1.43
HMGCLL1-206ENST00000428842 KRTAP7-1Q8IUC3 87 aa6.1□□□□□ -1.43
HMGCLL1-206ENST00000428842 APOBP04114 4563 aaKnown RBP6.1□□□□□ -1.43
HMGCLL1-206ENST00000428842 SERTAD4-AS1Q5TG53 156 aa6.09□□□□□ -1.43
HMGCLL1-206ENST00000428842 SDIM1Q6ZPB5 146 aa6.09□□□□□ -1.43
HMGCLL1-206ENST00000428842 SMIM11BQ8TCY0 68 aa6.09□□□□□ -1.43
HMGCLL1-206ENST00000428842 NCR3O14931 201 aa6.09□□□□□ -1.43
HMGCLL1-206ENST00000428842 IGLV5-52A0A0A0MRZ9 124 aa6.08□□□□□ -1.44
HMGCLL1-206ENST00000428842 H0YGX0 51 aa6.08□□□□□ -1.44
HMGCLL1-206ENST00000428842 FAM19A5Q7Z5A7 132 aaPredicted RBP6.08□□□□□ -1.44
HMGCLL1-206ENST00000428842 A0A1W2PNN7 141 aa6.07□□□□□ -1.44
HMGCLL1-206ENST00000428842 DPH3Q96FX2 82 aa6.07□□□□□ -1.44
HMGCLL1-206ENST00000428842 A0A087WYN8 130 aa6.07□□□□□ -1.44
HMGCLL1-206ENST00000428842 INAFM2P0DMQ5 153 aa6.07□□□□□ -1.44
HMGCLL1-206ENST00000428842 KRTAP10-1P60331 282 aa6.07□□□□□ -1.44
HMGCLL1-206ENST00000428842 C2orf48Q96LS8 159 aa6.07□□□□□ -1.44
HMGCLL1-206ENST00000428842 IMUPQ9GZP8 106 aa6.07□□□□□ -1.44
HMGCLL1-206ENST00000428842 NDUFC2-KCTD14E9PQ53 114 aa6.06□□□□□ -1.44
HMGCLL1-206ENST00000428842 J3QL48 77 aa6.06□□□□□ -1.44
HMGCLL1-206ENST00000428842 KRTAP11-1Q8IUC1 163 aa6.06□□□□□ -1.44
HMGCLL1-206ENST00000428842 SMCR5Q8TEV8 140 aa6.06□□□□□ -1.44
HMGCLL1-206ENST00000428842 RPL37AP8A6NKH3 93 aa6.06□□□□□ -1.44
HMGCLL1-206ENST00000428842 C9orf163Q8N9P6 203 aa6.06□□□□□ -1.44
HMGCLL1-206ENST00000428842 CNBPP62633 177 aaKnown RBP6.05□□□□□ -1.44
HMGCLL1-206ENST00000428842 LINC00643Q86TS7 51 aa6.05□□□□□ -1.44
HMGCLL1-206ENST00000428842 OBSCN-AS1Q96MR7 158 aa6.05□□□□□ -1.44
HMGCLL1-206ENST00000428842 CXCL5P42830 114 aa6.05□□□□□ -1.44
HMGCLL1-206ENST00000428842 DNAL4O96015 105 aa6.04□□□□□ -1.44
HMGCLL1-206ENST00000428842 COX17Q14061 63 aa6.04□□□□□ -1.44
HMGCLL1-206ENST00000428842 NDUFC2O95298 119 aa6.03□□□□□ -1.44
HMGCLL1-206ENST00000428842 LINC00167Q96N53 147 aa6.03□□□□□ -1.44
HMGCLL1-206ENST00000428842 A0A1B0GVY2 172 aa6.03□□□□□ -1.44
HMGCLL1-206ENST00000428842 CCDC179H3BU77 68 aa6.03□□□□□ -1.44
HMGCLL1-206ENST00000428842 PHF5AQ7RTV0 110 aaKnown RBP6.03□□□□□ -1.44
HMGCLL1-206ENST00000428842 OR13C6PQ8NH95 151 aa6.03□□□□□ -1.44
HMGCLL1-206ENST00000428842 HSPG2P98160 4391 aa6.02□□□□□ -1.45
HMGCLL1-206ENST00000428842 A0A1B0GX51 115 aa6.01□□□□□ -1.45
HMGCLL1-206ENST00000428842 LOC107984640A0A0U1RRK4 108 aa6.01□□□□□ -1.45
HMGCLL1-206ENST00000428842 B5MCH6 92 aa6.01□□□□□ -1.45
HMGCLL1-206ENST00000428842 C14orf177Q52M58 125 aa6.01□□□□□ -1.45
HMGCLL1-206ENST00000428842 GAGE2AQ6NT46 116 aa6.01□□□□□ -1.45
HMGCLL1-206ENST00000428842 VPREB1P12018 145 aa6□□□□□ -1.45
HMGCLL1-206ENST00000428842 SMR3BP02814 79 aaPredicted RBP6□□□□□ -1.45
HMGCLL1-206ENST00000428842 C16orf90A8MZG2 172 aa5.99□□□□□ -1.45
HMGCLL1-206ENST00000428842 C14orf132Q9NPU4 83 aa5.99□□□□□ -1.45
HMGCLL1-206ENST00000428842 ORMDL1Q9P0S3 153 aa5.99□□□□□ -1.45
HMGCLL1-206ENST00000428842 TRBV10-3A0A0K0K1G6 114 aa5.99□□□□□ -1.45
HMGCLL1-206ENST00000428842 FAM236AA0A1B0GUQ0 79 aa5.99□□□□□ -1.45
HMGCLL1-206ENST00000428842 FAM236BA0A1B0GV22 79 aa5.99□□□□□ -1.45
HMGCLL1-206ENST00000428842 LINC00528Q8N1L1 170 aa5.99□□□□□ -1.45
HMGCLL1-206ENST00000428842 TMEM126AQ9H061 195 aa5.99□□□□□ -1.45
HMGCLL1-206ENST00000428842 RYR1P21817 5038 aa5.99□□□□□ -1.45
HMGCLL1-206ENST00000428842 SCXQ7RTU7 201 aa5.98□□□□□ -1.45
HMGCLL1-206ENST00000428842 CIRBP-AS1Q8TBR5 109 aa5.98□□□□□ -1.45
HMGCLL1-206ENST00000428842 C7orf33Q8WU49 177 aa5.98□□□□□ -1.45
HMGCLL1-206ENST00000428842 KRTAP17-1Q9BYP8 105 aa5.98□□□□□ -1.45
HMGCLL1-206ENST00000428842 SPACA4Q8TDM5 124 aa5.98□□□□□ -1.45
HMGCLL1-206ENST00000428842 SS18L2Q9UHA2 77 aa5.98□□□□□ -1.45
HMGCLL1-206ENST00000428842 MYCBP2O75592 4640 aa5.98□□□□□ -1.45
HMGCLL1-206ENST00000428842 TLX1NBP0CAT3 122 aa5.97□□□□□ -1.45
HMGCLL1-206ENST00000428842 HIST1H4AP62805 103 aaKnown RBP5.96□□□□□ -1.45
HMGCLL1-206ENST00000428842 Q6JHZ5 121 aa5.96□□□□□ -1.46
HMGCLL1-206ENST00000428842 NKAPP1Q8N9T2 125 aa5.96□□□□□ -1.46
HMGCLL1-206ENST00000428842 LINC00846Q9NV44 126 aa5.96□□□□□ -1.46
HMGCLL1-206ENST00000428842 FLG2Q5D862 2391 aaPredicted RBP5.96□□□□□ -1.46
HMGCLL1-206ENST00000428842 JMJD7-PLA2G4BH0Y9G9 81 aa5.95□□□□□ -1.46
HMGCLL1-206ENST00000428842 GHRHP01286 108 aa5.95□□□□□ -1.46
HMGCLL1-206ENST00000428842 CCKP06307 115 aa5.95□□□□□ -1.46
HMGCLL1-206ENST00000428842 S100A7L2Q5SY68 101 aa5.95□□□□□ -1.46
HMGCLL1-206ENST00000428842 TMEM256-PLSCR3K7ERE1 68 aa5.94□□□□□ -1.46
HMGCLL1-206ENST00000428842 MRPL55Q7Z7F7 128 aaKnown RBP5.94□□□□□ -1.46
HMGCLL1-206ENST00000428842 LRP1Q07954 4544 aaKnown RBP5.94□□□□□ -1.46
HMGCLL1-206ENST00000428842 C6orf99Q4VX62 202 aa5.94□□□□□ -1.46
HMGCLL1-206ENST00000428842 LINC00336Q6ZUF6 198 aa5.94□□□□□ -1.46
HMGCLL1-206ENST00000428842 LINC00575Q6W349 94 aa5.93□□□□□ -1.46
HMGCLL1-206ENST00000428842 IGLV6-57P01721 117 aa5.93□□□□□ -1.46
HMGCLL1-206ENST00000428842 UBE2BP63146 152 aa5.92□□□□□ -1.46
HMGCLL1-206ENST00000428842 PRLHP81277 87 aa5.92□□□□□ -1.46
HMGCLL1-206ENST00000428842 C3orf22Q8N5N4 141 aa5.92□□□□□ -1.46
HMGCLL1-206ENST00000428842 UQCRQO14949 82 aa5.91□□□□□ -1.46
HMGCLL1-206ENST00000428842 F8WDY8 70 aa5.91□□□□□ -1.46
HMGCLL1-206ENST00000428842 ABCA13Q86UQ4 5058 aa5.91□□□□□ -1.46
HMGCLL1-206ENST00000428842 IGKV3D-7A0A0C4DH55 119 aa5.9□□□□□ -1.46
HMGCLL1-206ENST00000428842 ATOX1O00244 68 aa5.9□□□□□ -1.46
HMGCLL1-206ENST00000428842 Q6ZSA8 131 aa5.9□□□□□ -1.46
HMGCLL1-206ENST00000428842 IGLV1-50A0A075B6I6 118 aa5.9□□□□□ -1.47
HMGCLL1-206ENST00000428842 M0R378 163 aa5.9□□□□□ -1.47
HMGCLL1-206ENST00000428842 hADV29S1A0JD25 119 aa5.89□□□□□ -1.47
HMGCLL1-206ENST00000428842 COX7CP15954 63 aa5.89□□□□□ -1.47
HMGCLL1-206ENST00000428842 TRAV23DV6A0A075B6W5 121 aa5.89□□□□□ -1.47
HMGCLL1-206ENST00000428842 PSORS1C2Q9UIG4 136 aa5.89□□□□□ -1.47
HMGCLL1-206ENST00000428842 PCLOQ9Y6V0 5065 aa5.88□□□□□ -1.47
HMGCLL1-206ENST00000428842 C9orf153Q5TBE3 101 aa5.88□□□□□ -1.47
HMGCLL1-206ENST00000428842 ATP5EP2Q5VTU8 51 aa5.88□□□□□ -1.47
HMGCLL1-206ENST00000428842 PLAC8Q9NZF1 115 aa5.88□□□□□ -1.47
HMGCLL1-206ENST00000428842 LOC110117498A0A087WWA1 95 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms