RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 LRCOL1A6NCL2 159 aa13.94□□□□□ -0.18
CNEP1R1-202ENST00000427478 Q6ZRN7 208 aaPredicted RBP13.94□□□□□ -0.18
CNEP1R1-202ENST00000427478 IGKV2-24A0A0C4DH68 120 aa13.93□□□□□ -0.18
CNEP1R1-202ENST00000427478 IGLV1-50A0A075B6I6 118 aa13.93□□□□□ -0.18
CNEP1R1-202ENST00000427478 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.93□□□□□ -0.18
CNEP1R1-202ENST00000427478 MRPL55Q7Z7F7 128 aaKnown RBP13.93□□□□□ -0.18
CNEP1R1-202ENST00000427478 C16orf90A8MZG2 172 aa13.92□□□□□ -0.18
CNEP1R1-202ENST00000427478 KRTAP21-3Q3LHN1 58 aa13.92□□□□□ -0.18
CNEP1R1-202ENST00000427478 SCGB1A1P11684 91 aa13.91□□□□□ -0.18
CNEP1R1-202ENST00000427478 PRYO14603 147 aa13.9□□□□□ -0.18
CNEP1R1-202ENST00000427478 LAMTOR3Q9UHA4 124 aa13.9□□□□□ -0.18
CNEP1R1-202ENST00000427478 SMCR5Q8TEV8 140 aa13.9□□□□□ -0.18
CNEP1R1-202ENST00000427478 H3BQ85 93 aa13.87□□□□□ -0.19
CNEP1R1-202ENST00000427478 VPS13DQ5THJ4 4388 aa13.87□□□□□ -0.19
CNEP1R1-202ENST00000427478 CCKP06307 115 aa13.85□□□□□ -0.19
CNEP1R1-202ENST00000427478 A0A1W2PNN7 141 aa13.85□□□□□ -0.19
CNEP1R1-202ENST00000427478 KRTAP4-16G5E9R7 235 aaPredicted RBP13.85□□□□□ -0.19
CNEP1R1-202ENST00000427478 SPRR1AP35321 89 aa13.85□□□□□ -0.19
CNEP1R1-202ENST00000427478 ETDCA0A1B0GVM5 59 aa13.84□□□□□ -0.19
CNEP1R1-202ENST00000427478 RBM3P98179 157 aaKnown RBP13.84□□□□□ -0.19
CNEP1R1-202ENST00000427478 B5MCH6 92 aa13.84□□□□□ -0.19
CNEP1R1-202ENST00000427478 CHTF8P0CG12 524 aa13.84□□□□□ -0.19
CNEP1R1-202ENST00000427478 Q6ZRX8 168 aa13.84□□□□□ -0.19
CNEP1R1-202ENST00000427478 C9orf163Q8N9P6 203 aa13.84□□□□□ -0.19
CNEP1R1-202ENST00000427478 GHRHP01286 108 aa13.83□□□□□ -0.2
CNEP1R1-202ENST00000427478 SDIM1Q6ZPB5 146 aa13.83□□□□□ -0.2
CNEP1R1-202ENST00000427478 LINC00846Q9NV44 126 aa13.81□□□□□ -0.2
CNEP1R1-202ENST00000427478 LINC00643Q86TS7 51 aa13.8□□□□□ -0.2
CNEP1R1-202ENST00000427478 Q9BRP9 147 aa13.8□□□□□ -0.2
CNEP1R1-202ENST00000427478 REG3GQ6UW15 175 aa13.79□□□□□ -0.2
CNEP1R1-202ENST00000427478 Q6ZR54 194 aa13.78□□□□□ -0.2
CNEP1R1-202ENST00000427478 DHRS4-AS1Q9P1J3 65 aa13.78□□□□□ -0.2
CNEP1R1-202ENST00000427478 Q6ZQT0 140 aa13.78□□□□□ -0.2
CNEP1R1-202ENST00000427478 FBN3Q75N90 2809 aa13.77□□□□□ -0.2
CNEP1R1-202ENST00000427478 NDUFV3P56181 108 aaKnown RBP13.77□□□□□ -0.21
CNEP1R1-202ENST00000427478 DSCR8Q96T75 97 aa13.77□□□□□ -0.21
CNEP1R1-202ENST00000427478 LOC110117498A0A087WWA1 95 aa13.76□□□□□ -0.21
CNEP1R1-202ENST00000427478 A0A087WTM6 91 aa13.76□□□□□ -0.21
CNEP1R1-202ENST00000427478 DEFB105AQ8NG35 78 aa13.76□□□□□ -0.21
CNEP1R1-202ENST00000427478 PKIGQ9Y2B9 76 aa13.75□□□□□ -0.21
CNEP1R1-202ENST00000427478 Q6Q795 121 aa13.74□□□□□ -0.21
CNEP1R1-202ENST00000427478 TRBV7-7A0A0K0K1E9 115 aa13.73□□□□□ -0.21
CNEP1R1-202ENST00000427478 LY6G6CO95867 125 aa13.73□□□□□ -0.21
CNEP1R1-202ENST00000427478 UBE2BP63146 152 aa13.73□□□□□ -0.21
CNEP1R1-202ENST00000427478 PHF5AQ7RTV0 110 aaKnown RBP13.73□□□□□ -0.21
CNEP1R1-202ENST00000427478 Q8N377 158 aa13.72□□□□□ -0.21
CNEP1R1-202ENST00000427478 KMT2AQ03164 3969 aa13.71□□□□□ -0.21
CNEP1R1-202ENST00000427478 PANO1I0J062 215 aa13.7□□□□□ -0.22
CNEP1R1-202ENST00000427478 LINC01547P58512 204 aaPredicted RBP13.7□□□□□ -0.22
CNEP1R1-202ENST00000427478 TRBV7-4A0A0J9YYF1 115 aa13.7□□□□□ -0.22
CNEP1R1-202ENST00000427478 ERC2-IT1O76042 136 aa13.7□□□□□ -0.22
CNEP1R1-202ENST00000427478 FUSP35637 526 aaKnown RBP eCLIP13.7□□□□□ -0.22
CNEP1R1-202ENST00000427478 ST20-AS1Q8NBB2 130 aa13.7□□□□□ -0.22
CNEP1R1-202ENST00000427478 LINC00474Q9P2X8 69 aa13.69□□□□□ -0.22
CNEP1R1-202ENST00000427478 PDE6GP18545 87 aa13.68□□□□□ -0.22
CNEP1R1-202ENST00000427478 WWC2-AS2Q96NR7 200 aa13.68□□□□□ -0.22
CNEP1R1-202ENST00000427478 FAM19A1Q7Z5A9 133 aa13.67□□□□□ -0.22
CNEP1R1-202ENST00000427478 KRTAP11-1Q8IUC1 163 aa13.67□□□□□ -0.22
CNEP1R1-202ENST00000427478 PRLHP81277 87 aa13.66□□□□□ -0.22
CNEP1R1-202ENST00000427478 C1orf134Q5TEV5 83 aa13.66□□□□□ -0.22
CNEP1R1-202ENST00000427478 C3orf22Q8N5N4 141 aa13.65□□□□□ -0.22
CNEP1R1-202ENST00000427478 DPH3Q96FX2 82 aa13.65□□□□□ -0.22
CNEP1R1-202ENST00000427478 IMUPQ9GZP8 106 aa13.65□□□□□ -0.22
CNEP1R1-202ENST00000427478 IGKV3D-7A0A0C4DH55 119 aa13.64□□□□□ -0.23
CNEP1R1-202ENST00000427478 Q6JHZ5 121 aa13.64□□□□□ -0.23
CNEP1R1-202ENST00000427478 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.64□□□□□ -0.23
CNEP1R1-202ENST00000427478 IGLV5-48A0A075B6I7 105 aa13.63□□□□□ -0.23
CNEP1R1-202ENST00000427478 RTL8CO15255 209 aa13.63□□□□□ -0.23
CNEP1R1-202ENST00000427478 LINC00476Q8WZB0 136 aa13.63□□□□□ -0.23
CNEP1R1-202ENST00000427478 SPACA4Q8TDM5 124 aa13.63□□□□□ -0.23
CNEP1R1-202ENST00000427478 DNAH2Q9P225 4427 aa13.62□□□□□ -0.23
CNEP1R1-202ENST00000427478 UBL5Q9BZL1 73 aa13.61□□□□□ -0.23
CNEP1R1-202ENST00000427478 TGP01266 2768 aa13.6□□□□□ -0.23
CNEP1R1-202ENST00000427478 HIGD2AQ9BW72 106 aa13.59□□□□□ -0.23
CNEP1R1-202ENST00000427478 ANAPC13Q9BS18 74 aa13.57□□□□□ -0.24
CNEP1R1-202ENST00000427478 FAM236AA0A1B0GUQ0 79 aa13.55□□□□□ -0.24
CNEP1R1-202ENST00000427478 FAM236BA0A1B0GV22 79 aa13.55□□□□□ -0.24
CNEP1R1-202ENST00000427478 IGLV5-52A0A0A0MRZ9 124 aa13.54□□□□□ -0.24
CNEP1R1-202ENST00000427478 EPM2AB3EWF7 344 aa13.54□□□□□ -0.24
CNEP1R1-202ENST00000427478 TNP2Q05952 138 aa13.54□□□□□ -0.24
CNEP1R1-202ENST00000427478 Q6ZVQ6 151 aa13.54□□□□□ -0.24
CNEP1R1-202ENST00000427478 HECTD4Q9Y4D8 3996 aa13.52□□□□□ -0.24
CNEP1R1-202ENST00000427478 ATP5EP2Q5VTU8 51 aa13.52□□□□□ -0.25
CNEP1R1-202ENST00000427478 UBE2AP49459 152 aa13.51□□□□□ -0.25
CNEP1R1-202ENST00000427478 DNAH17Q9UFH2 4485 aa13.51□□□□□ -0.25
CNEP1R1-202ENST00000427478 SMIM29Q86T20 159 aa13.51□□□□□ -0.25
CNEP1R1-202ENST00000427478 H0Y9J4 135 aa13.5□□□□□ -0.25
CNEP1R1-202ENST00000427478 C1orf137Q5JT78 98 aa13.49□□□□□ -0.25
CNEP1R1-202ENST00000427478 DNAH6Q9C0G6 4158 aa13.48□□□□□ -0.25
CNEP1R1-202ENST00000427478 A0A087WVE0 104 aa13.48□□□□□ -0.25
CNEP1R1-202ENST00000427478 BCE1O60756 84 aa13.48□□□□□ -0.25
CNEP1R1-202ENST00000427478 C3orf84H3BNL1 204 aa13.48□□□□□ -0.25
CNEP1R1-202ENST00000427478 HIST1H4AP62805 103 aaKnown RBP13.47□□□□□ -0.25
CNEP1R1-202ENST00000427478 HAMPP81172 84 aa13.47□□□□□ -0.25
CNEP1R1-202ENST00000427478 ALMS1Q8TCU4 4167 aa13.45□□□□□ -0.26
CNEP1R1-202ENST00000427478 F8WEM9 126 aa13.45□□□□□ -0.26
CNEP1R1-202ENST00000427478 A0A1W2PNM2 257 aa13.43□□□□□ -0.26
CNEP1R1-202ENST00000427478 PLAC8Q9NZF1 115 aa13.43□□□□□ -0.26
CNEP1R1-202ENST00000427478 KRTAP13-1Q8IUC0 172 aa13.42□□□□□ -0.26
CNEP1R1-202ENST00000427478 Q8NBF4 154 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms