RNA–Protein interactions for RNA: ENST00000425707.7

RARA-206, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 3,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-206ENST00000425707 SCXQ7RTU7 201 aa11.41□□□□□ -0.58
RARA-206ENST00000425707 TMEM254Q8TBM7 123 aa11.41□□□□□ -0.58
RARA-206ENST00000425707 HIGD2BQ4VC39 106 aa11.41□□□□□ -0.58
RARA-206ENST00000425707 KCNQ1DNQ9H478 68 aa11.41□□□□□ -0.58
RARA-206ENST00000425707 NBEAL2Q6ZNJ1 2754 aa11.4□□□□□ -0.58
RARA-206ENST00000425707 IGLV5-48A0A075B6I7 105 aa11.39□□□□□ -0.59
RARA-206ENST00000425707 OCR1Q9BZK8 76 aa11.39□□□□□ -0.59
RARA-206ENST00000425707 ATRQ13535 2644 aa11.38□□□□□ -0.59
RARA-206ENST00000425707 WFDC10BQ8IUB3 73 aa11.38□□□□□ -0.59
RARA-206ENST00000425707 A0A0U1RQV1 116 aa11.36□□□□□ -0.59
RARA-206ENST00000425707 KPRPQ5T749 579 aaPredicted RBP11.35□□□□□ -0.59
RARA-206ENST00000425707 Q6ZRP5 223 aa11.35□□□□□ -0.59
RARA-206ENST00000425707 PLA2G2DQ9UNK4 145 aa11.35□□□□□ -0.59
RARA-206ENST00000425707 FP248Q71RG6 208 aaPredicted RBP11.35□□□□□ -0.59
RARA-206ENST00000425707 DHRS4-AS1Q9P1J3 65 aa11.33□□□□□ -0.6
RARA-206ENST00000425707 Q8N377 158 aa11.33□□□□□ -0.6
RARA-206ENST00000425707 C1orf43Q9BWL3 253 aa11.33□□□□□ -0.6
RARA-206ENST00000425707 TLX1NBP0CAT3 122 aa11.32□□□□□ -0.6
RARA-206ENST00000425707 PRO0628Q9UI54 55 aa11.32□□□□□ -0.6
RARA-206ENST00000425707 PRYO14603 147 aa11.32□□□□□ -0.6
RARA-206ENST00000425707 SYCNQ0VAF6 134 aa11.32□□□□□ -0.6
RARA-206ENST00000425707 LINC01556Q5JQF7 62 aa11.32□□□□□ -0.6
RARA-206ENST00000425707 NKAPP1Q8N9T2 125 aa11.31□□□□□ -0.6
RARA-206ENST00000425707 IGLV5-37A0A075B6J1 123 aa11.29□□□□□ -0.6
RARA-206ENST00000425707 FUSP35637 526 aaKnown RBP eCLIP11.29□□□□□ -0.6
RARA-206ENST00000425707 C7orf33Q8WU49 177 aa11.29□□□□□ -0.6
RARA-206ENST00000425707 LCE6AA0A183 80 aa11.28□□□□□ -0.6
RARA-206ENST00000425707 Q8N9L7 120 aa11.28□□□□□ -0.6
RARA-206ENST00000425707 TNP2Q05952 138 aa11.27□□□□□ -0.6
RARA-206ENST00000425707 KRTAP4-16G5E9R7 235 aaPredicted RBP11.27□□□□□ -0.61
RARA-206ENST00000425707 Q6ZRX8 168 aa11.27□□□□□ -0.61
RARA-206ENST00000425707 SPRR1AP35321 89 aa11.26□□□□□ -0.61
RARA-206ENST00000425707 ESRGQ1W209 222 aa11.26□□□□□ -0.61
RARA-206ENST00000425707 VWFP04275 2813 aa11.26□□□□□ -0.61
RARA-206ENST00000425707 LINC00336Q6ZUF6 198 aa11.26□□□□□ -0.61
RARA-206ENST00000425707 C3orf84H3BNL1 204 aa11.25□□□□□ -0.61
RARA-206ENST00000425707 SERTAD4-AS1Q5TG53 156 aa11.24□□□□□ -0.61
RARA-206ENST00000425707 TENM1Q9UKZ4 2725 aa11.24□□□□□ -0.61
RARA-206ENST00000425707 SPRR4Q96PI1 79 aa11.24□□□□□ -0.61
RARA-206ENST00000425707 IGKV2D-24A0A075B6R9 120 aa11.23□□□□□ -0.61
RARA-206ENST00000425707 Q6ZTC4 211 aa11.23□□□□□ -0.61
RARA-206ENST00000425707 A0A1W2PNM2 257 aa11.22□□□□□ -0.61
RARA-206ENST00000425707 Q8NBF4 154 aa11.22□□□□□ -0.61
RARA-206ENST00000425707 IGLV1-50A0A075B6I6 118 aa11.21□□□□□ -0.61
RARA-206ENST00000425707 DEFB105AQ8NG35 78 aa11.21□□□□□ -0.61
RARA-206ENST00000425707 DNAH10OSP0CZ25 163 aa11.2□□□□□ -0.62
RARA-206ENST00000425707 C1orf137Q5JT78 98 aa11.2□□□□□ -0.62
RARA-206ENST00000425707 Q9BRP9 147 aa11.2□□□□□ -0.62
RARA-206ENST00000425707 LINC00474Q9P2X8 69 aa11.2□□□□□ -0.62
RARA-206ENST00000425707 HIGD2AQ9BW72 106 aa11.18□□□□□ -0.62
RARA-206ENST00000425707 ETDCA0A1B0GVM5 59 aa11.17□□□□□ -0.62
RARA-206ENST00000425707 SMIM29Q86T20 159 aa11.17□□□□□ -0.62
RARA-206ENST00000425707 COL6A5A8TX70 2615 aa11.17□□□□□ -0.62
RARA-206ENST00000425707 FBN1P35555 2871 aaKnown RBP11.16□□□□□ -0.62
RARA-206ENST00000425707 STAB1Q9NY15 2570 aa11.16□□□□□ -0.62
RARA-206ENST00000425707 ZCCHC13Q8WW36 166 aaKnown RBP11.14□□□□□ -0.63
RARA-206ENST00000425707 RETNQ9HD89 108 aa11.14□□□□□ -0.63
RARA-206ENST00000425707 DSCR10P59022 87 aa11.13□□□□□ -0.63
RARA-206ENST00000425707 FAM229BQ4G0N7 80 aa11.13□□□□□ -0.63
RARA-206ENST00000425707 DEFB131BA0A096LNP1 70 aa11.12□□□□□ -0.63
RARA-206ENST00000425707 FAM30AQ9NZY2 134 aa11.11□□□□□ -0.63
RARA-206ENST00000425707 RPL37AP8A6NKH3 93 aa11.1□□□□□ -0.63
RARA-206ENST00000425707 hDV103S1A0JD37 113 aa11.09□□□□□ -0.63
RARA-206ENST00000425707 MRPL55Q7Z7F7 128 aaKnown RBP11.09□□□□□ -0.63
RARA-206ENST00000425707 ST20-AS1Q8NBB2 130 aa11.09□□□□□ -0.63
RARA-206ENST00000425707 KRTAP7-1Q8IUC3 87 aa11.09□□□□□ -0.63
RARA-206ENST00000425707 C11orf45Q8TAV5 145 aa11.08□□□□□ -0.64
RARA-206ENST00000425707 FAM168BA1KXE4 195 aa11.07□□□□□ -0.64
RARA-206ENST00000425707 KRTAP10-11P60412 298 aa11.07□□□□□ -0.64
RARA-206ENST00000425707 TRRAPQ9Y4A5 3859 aa11.06□□□□□ -0.64
RARA-206ENST00000425707 K7EQZ3 153 aa11.05□□□□□ -0.64
RARA-206ENST00000425707 HCG22E2RYF7 251 aa11.05□□□□□ -0.64
RARA-206ENST00000425707 CYP4F30PQ9H0H9 118 aa11.05□□□□□ -0.64
RARA-206ENST00000425707 IGLV8-61A0A075B6I0 122 aa11.04□□□□□ -0.64
RARA-206ENST00000425707 REG3GQ6UW15 175 aa11.03□□□□□ -0.64
RARA-206ENST00000425707 UBE2BP63146 152 aa11.03□□□□□ -0.64
RARA-206ENST00000425707 Q1T7F1 81 aa11.03□□□□□ -0.64
RARA-206ENST00000425707 MPLKIPQ8TAP9 179 aa11.03□□□□□ -0.64
RARA-206ENST00000425707 LINC00476Q8WZB0 136 aa11.02□□□□□ -0.65
RARA-206ENST00000425707 NDUFB1O75438 58 aa11.02□□□□□ -0.65
RARA-206ENST00000425707 OXLD1Q5BKU9 147 aa11.02□□□□□ -0.65
RARA-206ENST00000425707 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.01□□□□□ -0.65
RARA-206ENST00000425707 KRTAP24-1Q3LI83 254 aa11.01□□□□□ -0.65
RARA-206ENST00000425707 BRK1Q8WUW1 75 aa11.01□□□□□ -0.65
RARA-206ENST00000425707 LINC00588Q9Y4M8 146 aa10.99□□□□□ -0.65
RARA-206ENST00000425707 PSCAO43653 123 aa10.99□□□□□ -0.65
RARA-206ENST00000425707 C1orf64Q8NEQ6 169 aa10.99□□□□□ -0.65
RARA-206ENST00000425707 IGFL1Q6UW32 110 aa10.97□□□□□ -0.65
RARA-206ENST00000425707 CASC10Q5T4H9 136 aa10.97□□□□□ -0.65
RARA-206ENST00000425707 PKD1L1Q8TDX9 2849 aa10.95□□□□□ -0.66
RARA-206ENST00000425707 H3BPC8 53 aa10.93□□□□□ -0.66
RARA-206ENST00000425707 MP68P56378 58 aa10.92□□□□□ -0.66
RARA-206ENST00000425707 KRTAP29-1A8MX34 341 aaPredicted RBP10.9□□□□□ -0.66
RARA-206ENST00000425707 NOTCH1P46531 2555 aa10.9□□□□□ -0.66
RARA-206ENST00000425707 DNAH1Q9P2D7 4330 aa10.9□□□□□ -0.67
RARA-206ENST00000425707 C16orf90A8MZG2 172 aa10.89□□□□□ -0.67
RARA-206ENST00000425707 TRAV22A0A0B4J277 110 aa10.89□□□□□ -0.67
RARA-206ENST00000425707 SPANXA2-OT1Q8N9U9 137 aa10.89□□□□□ -0.67
RARA-206ENST00000425707 PKIGQ9Y2B9 76 aa10.89□□□□□ -0.67
RARA-206ENST00000425707 V9GYY9 64 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms