RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 KRTAP10-1P60331 282 aa10.05□□□□□ -0.8
SHOX2-202ENST00000425436 LRP1BQ9NZR2 4599 aa10.05□□□□□ -0.8
SHOX2-202ENST00000425436 A0A087WYN8 130 aa10.04□□□□□ -0.8
SHOX2-202ENST00000425436 TRBV7-6A0A0J9YX20 115 aa10.04□□□□□ -0.8
SHOX2-202ENST00000425436 C6orf99Q4VX62 202 aa10.04□□□□□ -0.8
SHOX2-202ENST00000425436 TRAV23DV6A0A075B6W5 121 aa10.03□□□□□ -0.8
SHOX2-202ENST00000425436 H3BQ85 93 aa10.03□□□□□ -0.8
SHOX2-202ENST00000425436 BIRC6Q9NR09 4857 aa10.03□□□□□ -0.8
SHOX2-202ENST00000425436 TEX49A0A1B0GTD5 131 aa10.02□□□□□ -0.8
SHOX2-202ENST00000425436 LINC00167Q96N53 147 aa10.02□□□□□ -0.8
SHOX2-202ENST00000425436 ORMDL1Q9P0S3 153 aa10.02□□□□□ -0.8
SHOX2-202ENST00000425436 TRBV10-3A0A0K0K1G6 114 aa10.02□□□□□ -0.81
SHOX2-202ENST00000425436 LOC107984640A0A0U1RRK4 108 aa10.02□□□□□ -0.81
SHOX2-202ENST00000425436 CNBPP62633 177 aaKnown RBP10.02□□□□□ -0.81
SHOX2-202ENST00000425436 DIRC1Q969H9 104 aa10.02□□□□□ -0.81
SHOX2-202ENST00000425436 GHRHP01286 108 aa10.01□□□□□ -0.81
SHOX2-202ENST00000425436 INAFM2P0DMQ5 153 aa10.01□□□□□ -0.81
SHOX2-202ENST00000425436 LINC00575Q6W349 94 aa10.01□□□□□ -0.81
SHOX2-202ENST00000425436 C9orf163Q8N9P6 203 aa10.01□□□□□ -0.81
SHOX2-202ENST00000425436 PKIGQ9Y2B9 76 aa10.01□□□□□ -0.81
SHOX2-202ENST00000425436 C9orf129Q5T035 196 aaKnown RBP10□□□□□ -0.81
SHOX2-202ENST00000425436 NKAPP1Q8N9T2 125 aa10□□□□□ -0.81
SHOX2-202ENST00000425436 IGLV5-37A0A075B6J1 123 aa9.99□□□□□ -0.81
SHOX2-202ENST00000425436 TMEM256-PLSCR3K7ERE1 68 aa9.99□□□□□ -0.81
SHOX2-202ENST00000425436 ZNF73O43830 326 aaPredicted RBP9.99□□□□□ -0.81
SHOX2-202ENST00000425436 LCE2CQ5TA81 110 aa9.98□□□□□ -0.81
SHOX2-202ENST00000425436 hADV29S1A0JD25 119 aa9.97□□□□□ -0.81
SHOX2-202ENST00000425436 FAM30AQ9NZY2 134 aa9.97□□□□□ -0.81
SHOX2-202ENST00000425436 FAM240AA0A1B0GVK7 77 aa9.97□□□□□ -0.81
SHOX2-202ENST00000425436 ACYP1P07311 99 aa9.97□□□□□ -0.81
SHOX2-202ENST00000425436 COX7BP24311 80 aa9.97□□□□□ -0.81
SHOX2-202ENST00000425436 SIGMAR1Q99720 223 aa9.97□□□□□ -0.81
SHOX2-202ENST00000425436 SDIM1Q6ZPB5 146 aa9.96□□□□□ -0.82
SHOX2-202ENST00000425436 DNAH8Q96JB1 4490 aa9.96□□□□□ -0.82
SHOX2-202ENST00000425436 HAMPP81172 84 aa9.95□□□□□ -0.82
SHOX2-202ENST00000425436 KCNQ1DNQ9H478 68 aa9.95□□□□□ -0.82
SHOX2-202ENST00000425436 APOBP04114 4563 aaKnown RBP9.95□□□□□ -0.82
SHOX2-202ENST00000425436 ELOF1P60002 83 aaKnown RBP9.94□□□□□ -0.82
SHOX2-202ENST00000425436 GAGE2BQ13066 116 aa9.94□□□□□ -0.82
SHOX2-202ENST00000425436 JMJD7-PLA2G4BH0Y9G9 81 aa9.93□□□□□ -0.82
SHOX2-202ENST00000425436 OBSCN-AS1Q96MR7 158 aa9.93□□□□□ -0.82
SHOX2-202ENST00000425436 C22orf24Q9Y442 160 aa9.93□□□□□ -0.82
SHOX2-202ENST00000425436 KIAA1109Q2LD37 5005 aa9.93□□□□□ -0.82
SHOX2-202ENST00000425436 PANO1I0J062 215 aa9.92□□□□□ -0.82
SHOX2-202ENST00000425436 CHTF8P0CG12 524 aa9.92□□□□□ -0.82
SHOX2-202ENST00000425436 XGP55808 180 aa9.92□□□□□ -0.82
SHOX2-202ENST00000425436 SERTAD4-AS1Q5TG53 156 aa9.92□□□□□ -0.82
SHOX2-202ENST00000425436 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.92□□□□□ -0.82
SHOX2-202ENST00000425436 CDIP1Q9H305 208 aa9.92□□□□□ -0.82
SHOX2-202ENST00000425436 J3QL48 77 aa9.91□□□□□ -0.82
SHOX2-202ENST00000425436 C7orf33Q8WU49 177 aa9.91□□□□□ -0.82
SHOX2-202ENST00000425436 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.91□□□□□ -0.82
SHOX2-202ENST00000425436 PRYO14603 147 aa9.9□□□□□ -0.82
SHOX2-202ENST00000425436 Q6ZSA8 131 aa9.9□□□□□ -0.82
SHOX2-202ENST00000425436 IGKV2-24A0A0C4DH68 120 aa9.89□□□□□ -0.83
SHOX2-202ENST00000425436 CDK2AP2O75956 126 aa9.89□□□□□ -0.83
SHOX2-202ENST00000425436 DPH3Q96FX2 82 aa9.89□□□□□ -0.83
SHOX2-202ENST00000425436 A0A096LNI7 61 aa9.88□□□□□ -0.83
SHOX2-202ENST00000425436 RYR1P21817 5038 aa9.88□□□□□ -0.83
SHOX2-202ENST00000425436 HSPG2P98160 4391 aa9.88□□□□□ -0.83
SHOX2-202ENST00000425436 IGLV1-50A0A075B6I6 118 aa9.87□□□□□ -0.83
SHOX2-202ENST00000425436 MRPL55Q7Z7F7 128 aaKnown RBP9.87□□□□□ -0.83
SHOX2-202ENST00000425436 LINC00528Q8N1L1 170 aa9.87□□□□□ -0.83
SHOX2-202ENST00000425436 LINC00474Q9P2X8 69 aa9.87□□□□□ -0.83
SHOX2-202ENST00000425436 SCXQ7RTU7 201 aa9.86□□□□□ -0.83
SHOX2-202ENST00000425436 CIRBP-AS1Q8TBR5 109 aa9.86□□□□□ -0.83
SHOX2-202ENST00000425436 SCGB1A1P11684 91 aa9.85□□□□□ -0.83
SHOX2-202ENST00000425436 Q6ZQY7 126 aa9.85□□□□□ -0.83
SHOX2-202ENST00000425436 DHRS4-AS1Q9P1J3 65 aa9.85□□□□□ -0.83
SHOX2-202ENST00000425436 SPRR1AP35321 89 aa9.84□□□□□ -0.83
SHOX2-202ENST00000425436 C21orf62-AS1Q17RA5 79 aa9.84□□□□□ -0.83
SHOX2-202ENST00000425436 SPACA4Q8TDM5 124 aa9.84□□□□□ -0.83
SHOX2-202ENST00000425436 FAM168BA1KXE4 195 aa9.83□□□□□ -0.84
SHOX2-202ENST00000425436 SMR3BP02814 79 aaPredicted RBP9.83□□□□□ -0.84
SHOX2-202ENST00000425436 FAM19A5Q7Z5A7 132 aaPredicted RBP9.83□□□□□ -0.84
SHOX2-202ENST00000425436 PDE6GP18545 87 aa9.82□□□□□ -0.84
SHOX2-202ENST00000425436 KRTAP17-1Q9BYP8 105 aa9.82□□□□□ -0.84
SHOX2-202ENST00000425436 ETDCA0A1B0GVM5 59 aa9.82□□□□□ -0.84
SHOX2-202ENST00000425436 C14orf132Q9NPU4 83 aa9.82□□□□□ -0.84
SHOX2-202ENST00000425436 LAMTOR3Q9UHA4 124 aa9.82□□□□□ -0.84
SHOX2-202ENST00000425436 RBM3P98179 157 aaKnown RBP9.81□□□□□ -0.84
SHOX2-202ENST00000425436 GAGE2AQ6NT46 116 aa9.81□□□□□ -0.84
SHOX2-202ENST00000425436 KRTAP7-1Q8IUC3 87 aa9.81□□□□□ -0.84
SHOX2-202ENST00000425436 RPL37AP8A6NKH3 93 aa9.8□□□□□ -0.84
SHOX2-202ENST00000425436 CCKP06307 115 aa9.8□□□□□ -0.84
SHOX2-202ENST00000425436 Q6ZRX8 168 aa9.8□□□□□ -0.84
SHOX2-202ENST00000425436 B5MCH6 92 aa9.79□□□□□ -0.84
SHOX2-202ENST00000425436 KRTAP4-16G5E9R7 235 aaPredicted RBP9.79□□□□□ -0.84
SHOX2-202ENST00000425436 REG3GQ6UW15 175 aa9.78□□□□□ -0.84
SHOX2-202ENST00000425436 HERC2O95714 4834 aa9.78□□□□□ -0.84
SHOX2-202ENST00000425436 LOC110117498A0A087WWA1 95 aa9.77□□□□□ -0.84
SHOX2-202ENST00000425436 A0A1W2PNN7 141 aa9.77□□□□□ -0.84
SHOX2-202ENST00000425436 MT-ATP8P03928 68 aa9.77□□□□□ -0.84
SHOX2-202ENST00000425436 PLAC8Q9NZF1 115 aa9.77□□□□□ -0.84
SHOX2-202ENST00000425436 LINC00643Q86TS7 51 aa9.77□□□□□ -0.85
SHOX2-202ENST00000425436 DSCR8Q96T75 97 aa9.77□□□□□ -0.85
SHOX2-202ENST00000425436 FAT1Q14517 4588 aa9.76□□□□□ -0.85
SHOX2-202ENST00000425436 PCP4P48539 62 aa9.76□□□□□ -0.85
SHOX2-202ENST00000425436 NDUFV3P56181 108 aaKnown RBP9.74□□□□□ -0.85
SHOX2-202ENST00000425436 Q6Q795 121 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms