RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 NMUP48645 174 aa6.77□□□□□ -1.33
HLA-DQB3-203ENST00000425319 ARL17AQ8IVW1 177 aa6.77□□□□□ -1.33
HLA-DQB3-203ENST00000425319 LAMTOR3Q9UHA4 124 aa6.77□□□□□ -1.33
HLA-DQB3-203ENST00000425319 H0Y8G0 127 aa6.76□□□□□ -1.33
HLA-DQB3-203ENST00000425319 Q9BRP9 147 aa6.76□□□□□ -1.33
HLA-DQB3-203ENST00000425319 M0R2T5 61 aa6.75□□□□□ -1.33
HLA-DQB3-203ENST00000425319 ZNF73O43830 326 aaPredicted RBP6.75□□□□□ -1.33
HLA-DQB3-203ENST00000425319 PLNP26678 52 aa6.75□□□□□ -1.33
HLA-DQB3-203ENST00000425319 PCOTHQ58A44 107 aa6.75□□□□□ -1.33
HLA-DQB3-203ENST00000425319 TMA7Q9Y2S6 64 aaKnown RBP6.74□□□□□ -1.33
HLA-DQB3-203ENST00000425319 J3QQQ9 107 aa6.73□□□□□ -1.33
HLA-DQB3-203ENST00000425319 IGLV6-57P01721 117 aa6.73□□□□□ -1.33
HLA-DQB3-203ENST00000425319 HRCT1Q6UXD1 115 aa6.73□□□□□ -1.33
HLA-DQB3-203ENST00000425319 OR13C6PQ8NH95 151 aa6.73□□□□□ -1.33
HLA-DQB3-203ENST00000425319 DHRS4-AS1Q9P1J3 65 aa6.73□□□□□ -1.33
HLA-DQB3-203ENST00000425319 LEPROTL1O95214 131 aa6.72□□□□□ -1.33
HLA-DQB3-203ENST00000425319 TAL2Q16559 108 aa6.72□□□□□ -1.33
HLA-DQB3-203ENST00000425319 COX6B2Q6YFQ2 88 aa6.72□□□□□ -1.33
HLA-DQB3-203ENST00000425319 C9orf92A6NGG3 77 aa6.71□□□□□ -1.34
HLA-DQB3-203ENST00000425319 TRGC2P03986 189 aa6.71□□□□□ -1.34
HLA-DQB3-203ENST00000425319 PRO1933Q9H354 126 aa6.71□□□□□ -1.34
HLA-DQB3-203ENST00000425319 DPM2O94777 84 aa6.7□□□□□ -1.34
HLA-DQB3-203ENST00000425319 HSPB8Q9UJY1 196 aa6.7□□□□□ -1.34
HLA-DQB3-203ENST00000425319 H7C2G1 150 aa6.69□□□□□ -1.34
HLA-DQB3-203ENST00000425319 CD164Q04900 197 aa6.69□□□□□ -1.34
HLA-DQB3-203ENST00000425319 ST20-AS1Q8NBB2 130 aa6.69□□□□□ -1.34
HLA-DQB3-203ENST00000425319 MT1HP80294 61 aa6.68□□□□□ -1.34
HLA-DQB3-203ENST00000425319 FSIP2Q5CZC0 6907 aa6.67□□□□□ -1.34
HLA-DQB3-203ENST00000425319 HIST1H2BKO60814 126 aa6.67□□□□□ -1.34
HLA-DQB3-203ENST00000425319 IGKCP01834 107 aa6.67□□□□□ -1.34
HLA-DQB3-203ENST00000425319 HIST1H2BJP06899 126 aa6.67□□□□□ -1.34
HLA-DQB3-203ENST00000425319 SPRR1BP22528 89 aa6.67□□□□□ -1.34
HLA-DQB3-203ENST00000425319 HIST1H2BOP23527 126 aa6.67□□□□□ -1.34
HLA-DQB3-203ENST00000425319 HIST1H2BBP33778 126 aa6.67□□□□□ -1.34
HLA-DQB3-203ENST00000425319 AKR1D1P51857 326 aa6.67□□□□□ -1.34
HLA-DQB3-203ENST00000425319 HIST1H2BDP58876 126 aa6.67□□□□□ -1.34
HLA-DQB3-203ENST00000425319 NPC2P61916 151 aa6.67□□□□□ -1.34
HLA-DQB3-203ENST00000425319 HIST1H2BCP62807 126 aa6.67□□□□□ -1.34
HLA-DQB3-203ENST00000425319 HIST2H2BEQ16778 126 aa6.67□□□□□ -1.34
HLA-DQB3-203ENST00000425319 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.67□□□□□ -1.34
HLA-DQB3-203ENST00000425319 LINC00518Q8N0U6 118 aa6.67□□□□□ -1.34
HLA-DQB3-203ENST00000425319 HIST1H2BHQ93079 126 aa6.67□□□□□ -1.34
HLA-DQB3-203ENST00000425319 HIST1H2BNQ99877 126 aa6.67□□□□□ -1.34
HLA-DQB3-203ENST00000425319 HIST1H2BMQ99879 126 aa6.67□□□□□ -1.34
HLA-DQB3-203ENST00000425319 S100A6P06703 90 aa6.66□□□□□ -1.34
HLA-DQB3-203ENST00000425319 LCE2CQ5TA81 110 aa6.66□□□□□ -1.34
HLA-DQB3-203ENST00000425319 COX7BP24311 80 aa6.65□□□□□ -1.34
HLA-DQB3-203ENST00000425319 DEFB105AQ8NG35 78 aa6.65□□□□□ -1.34
HLA-DQB3-203ENST00000425319 SPANXCQ9NY87 97 aa6.65□□□□□ -1.34
HLA-DQB3-203ENST00000425319 TEX49A0A1B0GTD5 131 aa6.64□□□□□ -1.35
HLA-DQB3-203ENST00000425319 TSPEAR-AS2P59090 65 aa6.64□□□□□ -1.35
HLA-DQB3-203ENST00000425319 A0A0J9YXY3 114 aa6.63□□□□□ -1.35
HLA-DQB3-203ENST00000425319 TCL1BO95988 128 aa6.63□□□□□ -1.35
HLA-DQB3-203ENST00000425319 FABP4P15090 132 aa6.63□□□□□ -1.35
HLA-DQB3-203ENST00000425319 SPANXDQ9BXN6 97 aa6.63□□□□□ -1.35
HLA-DQB3-203ENST00000425319 Q1RN00 199 aa6.62□□□□□ -1.35
HLA-DQB3-203ENST00000425319 COA6Q5JTJ3 125 aaKnown RBP6.62□□□□□ -1.35
HLA-DQB3-203ENST00000425319 COPS9Q8WXC6 57 aa6.62□□□□□ -1.35
HLA-DQB3-203ENST00000425319 KRTAP10-6P60371 365 aaPredicted RBP6.61□□□□□ -1.35
HLA-DQB3-203ENST00000425319 Q5XG85 94 aa6.61□□□□□ -1.35
HLA-DQB3-203ENST00000425319 SNRPEP62304 92 aaKnown RBP6.6□□□□□ -1.35
HLA-DQB3-203ENST00000425319 ADAMTSL4-AS1Q5T5F5 129 aa6.6□□□□□ -1.35
HLA-DQB3-203ENST00000425319 LINC00308Q8TCZ7 52 aa6.6□□□□□ -1.35
HLA-DQB3-203ENST00000425319 E9PLD3 99 aa6.59□□□□□ -1.35
HLA-DQB3-203ENST00000425319 TIMM17BO60830 172 aa6.59□□□□□ -1.35
HLA-DQB3-203ENST00000425319 SERF1AO75920 110 aa6.59□□□□□ -1.35
HLA-DQB3-203ENST00000425319 ELOF1P60002 83 aaKnown RBP6.59□□□□□ -1.35
HLA-DQB3-203ENST00000425319 RPL37P61927 97 aaKnown RBP6.59□□□□□ -1.35
HLA-DQB3-203ENST00000425319 C6orf99Q4VX62 202 aa6.59□□□□□ -1.35
HLA-DQB3-203ENST00000425319 PMCHL2Q9BQD1 86 aa6.59□□□□□ -1.35
HLA-DQB3-203ENST00000425319 NHP2Q9NX24 153 aaKnown RBP6.59□□□□□ -1.35
HLA-DQB3-203ENST00000425319 LORP23490 312 aaPredicted RBP6.58□□□□□ -1.36
HLA-DQB3-203ENST00000425319 SOSTDC1Q6X4U4 206 aa6.58□□□□□ -1.36
HLA-DQB3-203ENST00000425319 TRBV7-6A0A0J9YX20 115 aa6.57□□□□□ -1.36
HLA-DQB3-203ENST00000425319 S100A2P29034 98 aa6.57□□□□□ -1.36
HLA-DQB3-203ENST00000425319 KRTAP19-2Q3LHN2 52 aa6.57□□□□□ -1.36
HLA-DQB3-203ENST00000425319 C1orf195Q5TG92 126 aa6.57□□□□□ -1.36
HLA-DQB3-203ENST00000425319 HIST3H2BBQ8N257 126 aa6.57□□□□□ -1.36
HLA-DQB3-203ENST00000425319 LOC105371267A0A1B0GV96 52 aa6.56□□□□□ -1.36
HLA-DQB3-203ENST00000425319 A0A1B0GWB2 263 aa6.56□□□□□ -1.36
HLA-DQB3-203ENST00000425319 A4D1N5 150 aa6.56□□□□□ -1.36
HLA-DQB3-203ENST00000425319 F8WEM9 126 aa6.56□□□□□ -1.36
HLA-DQB3-203ENST00000425319 Q6Q795 121 aa6.56□□□□□ -1.36
HLA-DQB3-203ENST00000425319 ATP11AUNQ6ZP68 121 aa6.56□□□□□ -1.36
HLA-DQB3-203ENST00000425319 LINC00310P59036 64 aa6.55□□□□□ -1.36
HLA-DQB3-203ENST00000425319 A6NDN8 102 aa6.54□□□□□ -1.36
HLA-DQB3-203ENST00000425319 ZNF815PA8K554 130 aa6.54□□□□□ -1.36
HLA-DQB3-203ENST00000425319 SMIM29Q86T20 159 aa6.54□□□□□ -1.36
HLA-DQB3-203ENST00000425319 EIF4EBP3O60516 100 aaPredicted RBP6.53□□□□□ -1.36
HLA-DQB3-203ENST00000425319 HIST1H2BLQ99880 126 aa6.53□□□□□ -1.36
HLA-DQB3-203ENST00000425319 VAMP3Q15836 100 aa6.52□□□□□ -1.37
HLA-DQB3-203ENST00000425319 SCGB1D4Q6XE38 83 aa6.52□□□□□ -1.37
HLA-DQB3-203ENST00000425319 PCP2Q8IVA1 136 aa6.52□□□□□ -1.37
HLA-DQB3-203ENST00000425319 IFITM1P13164 125 aa6.5□□□□□ -1.37
HLA-DQB3-203ENST00000425319 IGLV5-48A0A075B6I7 105 aa6.49□□□□□ -1.37
HLA-DQB3-203ENST00000425319 SYS1-DBNDD2H3BUS1 97 aa6.49□□□□□ -1.37
HLA-DQB3-203ENST00000425319 CFC1P0CG37 223 aa6.49□□□□□ -1.37
HLA-DQB3-203ENST00000425319 Q6ZVH6 145 aa6.49□□□□□ -1.37
HLA-DQB3-203ENST00000425319 LITAFQ99732 161 aa6.49□□□□□ -1.37
HLA-DQB3-203ENST00000425319 PET117Q6UWS5 81 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms