RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 SCXQ7RTU7 201 aa9.95□□□□□ -0.82
C9orf3-204ENST00000424143 NKAPP1Q8N9T2 125 aa9.94□□□□□ -0.82
C9orf3-204ENST00000424143 SPRR1AP35321 89 aa9.93□□□□□ -0.82
C9orf3-204ENST00000424143 LCE6AA0A183 80 aa9.93□□□□□ -0.82
C9orf3-204ENST00000424143 KRTAP4-16G5E9R7 235 aaPredicted RBP9.93□□□□□ -0.82
C9orf3-204ENST00000424143 TNP2Q05952 138 aa9.93□□□□□ -0.82
C9orf3-204ENST00000424143 ESRGQ1W209 222 aa9.93□□□□□ -0.82
C9orf3-204ENST00000424143 C7orf33Q8WU49 177 aa9.93□□□□□ -0.82
C9orf3-204ENST00000424143 SMR3AQ99954 134 aa9.93□□□□□ -0.82
C9orf3-204ENST00000424143 FUSP35637 526 aaKnown RBP eCLIP9.92□□□□□ -0.82
C9orf3-204ENST00000424143 DNAH10OSP0CZ25 163 aa9.91□□□□□ -0.82
C9orf3-204ENST00000424143 NBEAL2Q6ZNJ1 2754 aa9.91□□□□□ -0.82
C9orf3-204ENST00000424143 Q6ZRX8 168 aa9.9□□□□□ -0.82
C9orf3-204ENST00000424143 FP248Q71RG6 208 aaPredicted RBP9.89□□□□□ -0.83
C9orf3-204ENST00000424143 SPRR4Q96PI1 79 aa9.89□□□□□ -0.83
C9orf3-204ENST00000424143 CUBNO60494 3623 aa9.87□□□□□ -0.83
C9orf3-204ENST00000424143 IGLV1-50A0A075B6I6 118 aa9.87□□□□□ -0.83
C9orf3-204ENST00000424143 IGKV2D-24A0A075B6R9 120 aa9.87□□□□□ -0.83
C9orf3-204ENST00000424143 SERTAD4-AS1Q5TG53 156 aa9.87□□□□□ -0.83
C9orf3-204ENST00000424143 Q6ZTC4 211 aa9.87□□□□□ -0.83
C9orf3-204ENST00000424143 Q8NBF4 154 aa9.87□□□□□ -0.83
C9orf3-204ENST00000424143 PRO0628Q9UI54 55 aa9.87□□□□□ -0.83
C9orf3-204ENST00000424143 TENM4Q6N022 2769 aa9.86□□□□□ -0.83
C9orf3-204ENST00000424143 A0A1W2PNM2 257 aa9.85□□□□□ -0.83
C9orf3-204ENST00000424143 INAFM1C9JVW0 142 aa9.84□□□□□ -0.83
C9orf3-204ENST00000424143 Q8N9L7 120 aa9.84□□□□□ -0.83
C9orf3-204ENST00000424143 C1orf137Q5JT78 98 aa9.83□□□□□ -0.84
C9orf3-204ENST00000424143 Q9BRP9 147 aa9.83□□□□□ -0.84
C9orf3-204ENST00000424143 KMT2BQ9UMN6 2715 aaPredicted RBP9.82□□□□□ -0.84
C9orf3-204ENST00000424143 ETDCA0A1B0GVM5 59 aa9.82□□□□□ -0.84
C9orf3-204ENST00000424143 C3orf84H3BNL1 204 aa9.82□□□□□ -0.84
C9orf3-204ENST00000424143 NOTCH2Q04721 2471 aa9.81□□□□□ -0.84
C9orf3-204ENST00000424143 DEFB131BA0A096LNP1 70 aa9.81□□□□□ -0.84
C9orf3-204ENST00000424143 DEFB105AQ8NG35 78 aa9.81□□□□□ -0.84
C9orf3-204ENST00000424143 LINC00336Q6ZUF6 198 aa9.79□□□□□ -0.84
C9orf3-204ENST00000424143 ZCCHC13Q8WW36 166 aaKnown RBP9.79□□□□□ -0.84
C9orf3-204ENST00000424143 ITPR2Q14571 2701 aa9.78□□□□□ -0.84
C9orf3-204ENST00000424143 UNC79Q9P2D8 2635 aa9.78□□□□□ -0.84
C9orf3-204ENST00000424143 VWFP04275 2813 aa9.78□□□□□ -0.84
C9orf3-204ENST00000424143 RETNQ9HD89 108 aa9.78□□□□□ -0.84
C9orf3-204ENST00000424143 DSCR10P59022 87 aa9.77□□□□□ -0.85
C9orf3-204ENST00000424143 KRTAP10-11P60412 298 aa9.77□□□□□ -0.85
C9orf3-204ENST00000424143 C11orf45Q8TAV5 145 aa9.77□□□□□ -0.85
C9orf3-204ENST00000424143 IGLV8-61A0A075B6I0 122 aa9.76□□□□□ -0.85
C9orf3-204ENST00000424143 SMIM29Q86T20 159 aa9.76□□□□□ -0.85
C9orf3-204ENST00000424143 MRPL55Q7Z7F7 128 aaKnown RBP9.75□□□□□ -0.85
C9orf3-204ENST00000424143 HIGD2AQ9BW72 106 aa9.75□□□□□ -0.85
C9orf3-204ENST00000424143 KRTAP7-1Q8IUC3 87 aa9.74□□□□□ -0.85
C9orf3-204ENST00000424143 LINC00474Q9P2X8 69 aa9.74□□□□□ -0.85
C9orf3-204ENST00000424143 RPL37AP8A6NKH3 93 aa9.73□□□□□ -0.85
C9orf3-204ENST00000424143 HIVEP1P15822 2718 aa9.72□□□□□ -0.85
C9orf3-204ENST00000424143 hDV103S1A0JD37 113 aa9.71□□□□□ -0.85
C9orf3-204ENST00000424143 REG3GQ6UW15 175 aa9.71□□□□□ -0.85
C9orf3-204ENST00000424143 ST20-AS1Q8NBB2 130 aa9.71□□□□□ -0.85
C9orf3-204ENST00000424143 CYP4F30PQ9H0H9 118 aa9.71□□□□□ -0.85
C9orf3-204ENST00000424143 HELZ2Q9BYK8 2649 aaKnown RBP9.71□□□□□ -0.85
C9orf3-204ENST00000424143 FAM30AQ9NZY2 134 aa9.71□□□□□ -0.86
C9orf3-204ENST00000424143 OXLD1Q5BKU9 147 aa9.7□□□□□ -0.86
C9orf3-204ENST00000424143 FAM168BA1KXE4 195 aa9.69□□□□□ -0.86
C9orf3-204ENST00000424143 HCG22E2RYF7 251 aa9.69□□□□□ -0.86
C9orf3-204ENST00000424143 LINC00588Q9Y4M8 146 aa9.69□□□□□ -0.86
C9orf3-204ENST00000424143 NDUFB1O75438 58 aa9.68□□□□□ -0.86
C9orf3-204ENST00000424143 FAM229BQ4G0N7 80 aa9.68□□□□□ -0.86
C9orf3-204ENST00000424143 UBE2BP63146 152 aa9.67□□□□□ -0.86
C9orf3-204ENST00000424143 LINC00476Q8WZB0 136 aa9.67□□□□□ -0.86
C9orf3-204ENST00000424143 NSD1Q96L73 2696 aaPredicted RBP9.67□□□□□ -0.86
C9orf3-204ENST00000424143 K7EQZ3 153 aa9.66□□□□□ -0.86
C9orf3-204ENST00000424143 Q1T7F1 81 aa9.66□□□□□ -0.86
C9orf3-204ENST00000424143 TEP1Q99973 2627 aaKnown RBP9.66□□□□□ -0.86
C9orf3-204ENST00000424143 FASNP49327 2511 aaKnown RBP9.66□□□□□ -0.86
C9orf3-204ENST00000424143 H3BPC8 53 aa9.64□□□□□ -0.87
C9orf3-204ENST00000424143 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.64□□□□□ -0.87
C9orf3-204ENST00000424143 IGFL1Q6UW32 110 aa9.64□□□□□ -0.87
C9orf3-204ENST00000424143 TENM1Q9UKZ4 2725 aa9.63□□□□□ -0.87
C9orf3-204ENST00000424143 PSCAO43653 123 aa9.63□□□□□ -0.87
C9orf3-204ENST00000424143 SPRR1BP22528 89 aa9.63□□□□□ -0.87
C9orf3-204ENST00000424143 CASC10Q5T4H9 136 aa9.63□□□□□ -0.87
C9orf3-204ENST00000424143 H0Y9J4 135 aa9.62□□□□□ -0.87
C9orf3-204ENST00000424143 CNBPP62633 177 aaKnown RBP9.62□□□□□ -0.87
C9orf3-204ENST00000424143 C16orf90A8MZG2 172 aa9.61□□□□□ -0.87
C9orf3-204ENST00000424143 C1orf64Q8NEQ6 169 aa9.6□□□□□ -0.87
C9orf3-204ENST00000424143 ATRQ13535 2644 aa9.59□□□□□ -0.87
C9orf3-204ENST00000424143 KRTAP29-1A8MX34 341 aaPredicted RBP9.59□□□□□ -0.87
C9orf3-204ENST00000424143 MP68P56378 58 aa9.58□□□□□ -0.88
C9orf3-204ENST00000424143 SPANXA2-OT1Q8N9U9 137 aa9.58□□□□□ -0.88
C9orf3-204ENST00000424143 MPLKIPQ8TAP9 179 aa9.58□□□□□ -0.88
C9orf3-204ENST00000424143 V9GYY9 64 aa9.56□□□□□ -0.88
C9orf3-204ENST00000424143 DNAH1Q9P2D7 4330 aa9.56□□□□□ -0.88
C9orf3-204ENST00000424143 BRK1Q8WUW1 75 aa9.56□□□□□ -0.88
C9orf3-204ENST00000424143 PKIGQ9Y2B9 76 aa9.55□□□□□ -0.88
C9orf3-204ENST00000424143 TRAV22A0A0B4J277 110 aa9.54□□□□□ -0.88
C9orf3-204ENST00000424143 C14orf177Q52M58 125 aa9.53□□□□□ -0.88
C9orf3-204ENST00000424143 PRR15Q8IV56 129 aa9.53□□□□□ -0.88
C9orf3-204ENST00000424143 OTOGQ6ZRI0 2925 aa9.52□□□□□ -0.89
C9orf3-204ENST00000424143 A0A087WSZ3 146 aa9.52□□□□□ -0.89
C9orf3-204ENST00000424143 DNAH3Q8TD57 4116 aa9.52□□□□□ -0.89
C9orf3-204ENST00000424143 A0A096LNI7 61 aa9.51□□□□□ -0.89
C9orf3-204ENST00000424143 A0A1W2PNN7 141 aa9.5□□□□□ -0.89
C9orf3-204ENST00000424143 A8MWP4 228 aa9.5□□□□□ -0.89
C9orf3-204ENST00000424143 UBE2AP49459 152 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms