RNA–Protein interactions for RNA: ENST00000422797.5

LIMS1-207, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene LIMS1, Length 1,544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-207ENST00000422797 KRTAP26-1Q6PEX3 210 aa7.31□□□□□ -1.24
LIMS1-207ENST00000422797 BPY2O14599 106 aa7.3□□□□□ -1.24
LIMS1-207ENST00000422797 MRAPQ8TCY5 172 aa7.3□□□□□ -1.24
LIMS1-207ENST00000422797 C1orf43Q9BWL3 253 aa7.3□□□□□ -1.24
LIMS1-207ENST00000422797 KCNQ1DNQ9H478 68 aa7.3□□□□□ -1.24
LIMS1-207ENST00000422797 DHRS4-AS1Q9P1J3 65 aa7.3□□□□□ -1.24
LIMS1-207ENST00000422797 F8WEM9 126 aa7.29□□□□□ -1.24
LIMS1-207ENST00000422797 HIGD2BQ4VC39 106 aa7.29□□□□□ -1.24
LIMS1-207ENST00000422797 Q6ZRU5 148 aa7.29□□□□□ -1.24
LIMS1-207ENST00000422797 C15orf56Q8N910 161 aa7.29□□□□□ -1.24
LIMS1-207ENST00000422797 KRTAP4-12Q9BQ66 201 aa7.29□□□□□ -1.24
LIMS1-207ENST00000422797 PLA2G2DQ9UNK4 145 aa7.29□□□□□ -1.24
LIMS1-207ENST00000422797 NKAPP1Q8N9T2 125 aa7.28□□□□□ -1.24
LIMS1-207ENST00000422797 SONP18583 2426 aaKnown RBP7.28□□□□□ -1.24
LIMS1-207ENST00000422797 IGLV5-48A0A075B6I7 105 aa7.27□□□□□ -1.25
LIMS1-207ENST00000422797 LINC01556Q5JQF7 62 aa7.27□□□□□ -1.25
LIMS1-207ENST00000422797 KPRPQ5T749 579 aaPredicted RBP7.27□□□□□ -1.25
LIMS1-207ENST00000422797 TMEM254Q8TBM7 123 aa7.27□□□□□ -1.25
LIMS1-207ENST00000422797 CSMD2Q7Z408 3487 aa7.27□□□□□ -1.25
LIMS1-207ENST00000422797 FLNAP21333 2647 aaKnown RBP7.27□□□□□ -1.25
LIMS1-207ENST00000422797 IGKV4-1P06312 121 aa7.27□□□□□ -1.25
LIMS1-207ENST00000422797 TLX1NBP0CAT3 122 aa7.27□□□□□ -1.25
LIMS1-207ENST00000422797 FUSP35637 526 aaKnown RBP eCLIP7.27□□□□□ -1.25
LIMS1-207ENST00000422797 SYCNQ0VAF6 134 aa7.27□□□□□ -1.25
LIMS1-207ENST00000422797 C4orf26Q17RF5 130 aa7.27□□□□□ -1.25
LIMS1-207ENST00000422797 RMI2Q96E14 147 aa7.27□□□□□ -1.25
LIMS1-207ENST00000422797 PRYO14603 147 aa7.26□□□□□ -1.25
LIMS1-207ENST00000422797 HRCT1Q6UXD1 115 aa7.26□□□□□ -1.25
LIMS1-207ENST00000422797 WFDC10BQ8IUB3 73 aa7.26□□□□□ -1.25
LIMS1-207ENST00000422797 TM2D3Q9BRN9 247 aa7.26□□□□□ -1.25
LIMS1-207ENST00000422797 SNURFQ9Y675 71 aa7.26□□□□□ -1.25
LIMS1-207ENST00000422797 IGLV5-37A0A075B6J1 123 aa7.25□□□□□ -1.25
LIMS1-207ENST00000422797 NIPBLQ6KC79 2804 aaeCLIP7.24□□□□□ -1.25
LIMS1-207ENST00000422797 SCXQ7RTU7 201 aa7.24□□□□□ -1.25
LIMS1-207ENST00000422797 KRTAP4-7Q9BYR0 210 aa7.24□□□□□ -1.25
LIMS1-207ENST00000422797 A0A0U1RQV1 116 aa7.23□□□□□ -1.25
LIMS1-207ENST00000422797 Q6ZRP5 223 aa7.23□□□□□ -1.25
LIMS1-207ENST00000422797 OCR1Q9BZK8 76 aa7.23□□□□□ -1.25
LIMS1-207ENST00000422797 Q6ZRX8 168 aa7.22□□□□□ -1.25
LIMS1-207ENST00000422797 ANK3Q12955 4377 aaKnown RBP7.21□□□□□ -1.26
LIMS1-207ENST00000422797 Q8N377 158 aa7.21□□□□□ -1.26
LIMS1-207ENST00000422797 C7orf33Q8WU49 177 aa7.21□□□□□ -1.26
LIMS1-207ENST00000422797 PRO0628Q9UI54 55 aa7.21□□□□□ -1.26
LIMS1-207ENST00000422797 IGKV2D-24A0A075B6R9 120 aa7.2□□□□□ -1.26
LIMS1-207ENST00000422797 SPRR1AP35321 89 aa7.2□□□□□ -1.26
LIMS1-207ENST00000422797 ETDCA0A1B0GVM5 59 aa7.19□□□□□ -1.26
LIMS1-207ENST00000422797 DNAH10OSP0CZ25 163 aa7.19□□□□□ -1.26
LIMS1-207ENST00000422797 ESRGQ1W209 222 aa7.19□□□□□ -1.26
LIMS1-207ENST00000422797 Q8NBF4 154 aa7.19□□□□□ -1.26
LIMS1-207ENST00000422797 FN1P02751 2386 aaKnown RBP7.19□□□□□ -1.26
LIMS1-207ENST00000422797 LCE6AA0A183 80 aa7.18□□□□□ -1.26
LIMS1-207ENST00000422797 TNP2Q05952 138 aa7.18□□□□□ -1.26
LIMS1-207ENST00000422797 Q6ZTC4 211 aa7.18□□□□□ -1.26
LIMS1-207ENST00000422797 SPRR4Q96PI1 79 aa7.18□□□□□ -1.26
LIMS1-207ENST00000422797 SMR3AQ99954 134 aa7.18□□□□□ -1.26
LIMS1-207ENST00000422797 HIVEP2P31629 2446 aa7.17□□□□□ -1.26
LIMS1-207ENST00000422797 IGLV1-50A0A075B6I6 118 aa7.17□□□□□ -1.26
LIMS1-207ENST00000422797 KRTAP4-16G5E9R7 235 aaPredicted RBP7.17□□□□□ -1.26
LIMS1-207ENST00000422797 C3orf84H3BNL1 204 aa7.17□□□□□ -1.26
LIMS1-207ENST00000422797 C1orf137Q5JT78 98 aa7.17□□□□□ -1.26
LIMS1-207ENST00000422797 INAFM1C9JVW0 142 aa7.16□□□□□ -1.26
LIMS1-207ENST00000422797 SERTAD4-AS1Q5TG53 156 aa7.16□□□□□ -1.26
LIMS1-207ENST00000422797 FP248Q71RG6 208 aaPredicted RBP7.16□□□□□ -1.26
LIMS1-207ENST00000422797 DEFB131BA0A096LNP1 70 aa7.15□□□□□ -1.27
LIMS1-207ENST00000422797 DEFB105AQ8NG35 78 aa7.15□□□□□ -1.27
LIMS1-207ENST00000422797 Q8N9L7 120 aa7.14□□□□□ -1.27
LIMS1-207ENST00000422797 A0A1W2PNM2 257 aa7.13□□□□□ -1.27
LIMS1-207ENST00000422797 C11orf45Q8TAV5 145 aa7.13□□□□□ -1.27
LIMS1-207ENST00000422797 ZNF469Q96JG9 3925 aaPredicted RBP7.12□□□□□ -1.27
LIMS1-207ENST00000422797 SMIM29Q86T20 159 aa7.11□□□□□ -1.27
LIMS1-207ENST00000422797 Q9BRP9 147 aa7.11□□□□□ -1.27
LIMS1-207ENST00000422797 ACANP16112 2415 aa7.11□□□□□ -1.27
LIMS1-207ENST00000422797 RPL37AP8A6NKH3 93 aa7.11□□□□□ -1.27
LIMS1-207ENST00000422797 MRPL55Q7Z7F7 128 aaKnown RBP7.11□□□□□ -1.27
LIMS1-207ENST00000422797 RETNQ9HD89 108 aa7.11□□□□□ -1.27
LIMS1-207ENST00000422797 NDUFB1O75438 58 aa7.1□□□□□ -1.27
LIMS1-207ENST00000422797 LINC00336Q6ZUF6 198 aa7.09□□□□□ -1.27
LIMS1-207ENST00000422797 MDFIQ99750 246 aa7.09□□□□□ -1.27
LIMS1-207ENST00000422797 HIGD2AQ9BW72 106 aa7.09□□□□□ -1.27
LIMS1-207ENST00000422797 NSD1Q96L73 2696 aaPredicted RBP7.09□□□□□ -1.27
LIMS1-207ENST00000422797 REG3GQ6UW15 175 aa7.08□□□□□ -1.28
LIMS1-207ENST00000422797 ZCCHC13Q8WW36 166 aaKnown RBP7.08□□□□□ -1.28
LIMS1-207ENST00000422797 IGLV8-61A0A075B6I0 122 aa7.07□□□□□ -1.28
LIMS1-207ENST00000422797 UBE2BP63146 152 aa7.07□□□□□ -1.28
LIMS1-207ENST00000422797 STAB1Q9NY15 2570 aa7.07□□□□□ -1.28
LIMS1-207ENST00000422797 HCG22E2RYF7 251 aa7.06□□□□□ -1.28
LIMS1-207ENST00000422797 DSCR10P59022 87 aa7.06□□□□□ -1.28
LIMS1-207ENST00000422797 KRTAP10-11P60412 298 aa7.06□□□□□ -1.28
LIMS1-207ENST00000422797 FAM30AQ9NZY2 134 aa7.06□□□□□ -1.28
LIMS1-207ENST00000422797 CYP4F30PQ9H0H9 118 aa7.06□□□□□ -1.28
LIMS1-207ENST00000422797 LINC00474Q9P2X8 69 aa7.06□□□□□ -1.28
LIMS1-207ENST00000422797 COL6A5A8TX70 2615 aa7.05□□□□□ -1.28
LIMS1-207ENST00000422797 hDV103S1A0JD37 113 aa7.05□□□□□ -1.28
LIMS1-207ENST00000422797 H3BPC8 53 aa7.05□□□□□ -1.28
LIMS1-207ENST00000422797 ST20-AS1Q8NBB2 130 aa7.05□□□□□ -1.28
LIMS1-207ENST00000422797 PKIGQ9Y2B9 76 aa7.05□□□□□ -1.28
LIMS1-207ENST00000422797 NBEAL2Q6ZNJ1 2754 aa7.05□□□□□ -1.28
LIMS1-207ENST00000422797 LCE1DQ5T752 114 aa7.04□□□□□ -1.28
LIMS1-207ENST00000422797 LINC00476Q8WZB0 136 aa7.04□□□□□ -1.28
LIMS1-207ENST00000422797 NBEAL1Q6ZS30 2694 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms