RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 RPL24P83731 157 aaKnown RBP7.17□□□□□ -1.26
LINC00339-203ENST00000420503 AKR1D1P51857 326 aa7.16□□□□□ -1.26
LINC00339-203ENST00000420503 LINC00158P58513 81 aa7.16□□□□□ -1.26
LINC00339-203ENST00000420503 C4orf48Q5BLP8 95 aa7.16□□□□□ -1.26
LINC00339-203ENST00000420503 MEIG1Q5JSS6 88 aa7.16□□□□□ -1.26
LINC00339-203ENST00000420503 ATOH7Q8N100 152 aa7.16□□□□□ -1.26
LINC00339-203ENST00000420503 LINC00587B1AMM8 73 aa7.15□□□□□ -1.26
LINC00339-203ENST00000420503 NCR3O14931 201 aa7.15□□□□□ -1.26
LINC00339-203ENST00000420503 ANKRD39Q53RE8 183 aa7.15□□□□□ -1.26
LINC00339-203ENST00000420503 MIR7-3HGQ8N6C7 128 aa7.15□□□□□ -1.26
LINC00339-203ENST00000420503 SMCR5Q8TEV8 140 aa7.15□□□□□ -1.26
LINC00339-203ENST00000420503 A0A0J9YXY3 114 aa7.14□□□□□ -1.27
LINC00339-203ENST00000420503 ERC2-IT1O76042 136 aa7.14□□□□□ -1.27
LINC00339-203ENST00000420503 LORP23490 312 aaPredicted RBP7.14□□□□□ -1.27
LINC00339-203ENST00000420503 SEC61BP60468 96 aaKnown RBP7.14□□□□□ -1.27
LINC00339-203ENST00000420503 TTTY13Q9BZ97 58 aa7.14□□□□□ -1.27
LINC00339-203ENST00000420503 LOC107984156A0A0G2JMH3 177 aa7.13□□□□□ -1.27
LINC00339-203ENST00000420503 MOBPQ13875 183 aa7.13□□□□□ -1.27
LINC00339-203ENST00000420503 ARL17AQ8IVW1 177 aa7.13□□□□□ -1.27
LINC00339-203ENST00000420503 Q8N377 158 aa7.13□□□□□ -1.27
LINC00339-203ENST00000420503 IGLV9-49A0A0B4J1Y8 123 aa7.12□□□□□ -1.27
LINC00339-203ENST00000420503 KRTAP4-16G5E9R7 235 aaPredicted RBP7.12□□□□□ -1.27
LINC00339-203ENST00000420503 SPRR1AP35321 89 aa7.12□□□□□ -1.27
LINC00339-203ENST00000420503 MT1HP80294 61 aa7.12□□□□□ -1.27
LINC00339-203ENST00000420503 XP32Q5T750 250 aa7.12□□□□□ -1.27
LINC00339-203ENST00000420503 GAGE2AQ6NT46 116 aa7.12□□□□□ -1.27
LINC00339-203ENST00000420503 LITAFQ99732 161 aa7.12□□□□□ -1.27
LINC00339-203ENST00000420503 ZNF815PA8K554 130 aa7.11□□□□□ -1.27
LINC00339-203ENST00000420503 SPINK1P00995 79 aa7.11□□□□□ -1.27
LINC00339-203ENST00000420503 LINC00483Q53H64 154 aa7.11□□□□□ -1.27
LINC00339-203ENST00000420503 ADAMTSL4-AS1Q5T5F5 129 aa7.11□□□□□ -1.27
LINC00339-203ENST00000420503 ZNF706Q9Y5V0 76 aaPredicted RBP7.11□□□□□ -1.27
LINC00339-203ENST00000420503 TRBV10-3A0A0K0K1G6 114 aa7.1□□□□□ -1.27
LINC00339-203ENST00000420503 PRYO14603 147 aa7.1□□□□□ -1.27
LINC00339-203ENST00000420503 TIMM17BO60830 172 aa7.1□□□□□ -1.27
LINC00339-203ENST00000420503 BOD1L2Q8IYS8 172 aa7.1□□□□□ -1.27
LINC00339-203ENST00000420503 EIF4EBP3O60516 100 aaPredicted RBP7.09□□□□□ -1.27
LINC00339-203ENST00000420503 PCP2Q8IVA1 136 aa7.09□□□□□ -1.27
LINC00339-203ENST00000420503 SCGB1D1O95968 90 aa7.08□□□□□ -1.28
LINC00339-203ENST00000420503 SOSTDC1Q6X4U4 206 aa7.08□□□□□ -1.28
LINC00339-203ENST00000420503 KCNQ1DNQ9H478 68 aa7.08□□□□□ -1.28
LINC00339-203ENST00000420503 TMA7Q9Y2S6 64 aaKnown RBP7.08□□□□□ -1.28
LINC00339-203ENST00000420503 ETDCA0A1B0GVM5 59 aa7.07□□□□□ -1.28
LINC00339-203ENST00000420503 Q9BRP9 147 aa7.07□□□□□ -1.28
LINC00339-203ENST00000420503 B5MCH6 92 aa7.06□□□□□ -1.28
LINC00339-203ENST00000420503 SMCPP49901 116 aaPredicted RBP7.06□□□□□ -1.28
LINC00339-203ENST00000420503 JOSD1Q15040 202 aaPredicted RBP7.06□□□□□ -1.28
LINC00339-203ENST00000420503 HSBP1L1C9JCN9 74 aa7.05□□□□□ -1.28
LINC00339-203ENST00000420503 NDUFC2O95298 119 aa7.05□□□□□ -1.28
LINC00339-203ENST00000420503 NPC2P61916 151 aa7.05□□□□□ -1.28
LINC00339-203ENST00000420503 LINC00308Q8TCZ7 52 aa7.05□□□□□ -1.28
LINC00339-203ENST00000420503 SPANXDQ9BXN6 97 aa7.05□□□□□ -1.28
LINC00339-203ENST00000420503 SPANXCQ9NY87 97 aa7.05□□□□□ -1.28
LINC00339-203ENST00000420503 PCOTHQ58A44 107 aa7.04□□□□□ -1.28
LINC00339-203ENST00000420503 SCGB1D4Q6XE38 83 aa7.04□□□□□ -1.28
LINC00339-203ENST00000420503 MIEN1Q9BRT3 115 aa7.04□□□□□ -1.28
LINC00339-203ENST00000420503 TRBV10-2A0A0K0K1G8 114 aa7.03□□□□□ -1.28
LINC00339-203ENST00000420503 SPANXB1Q9NS25 103 aaPredicted RBP7.03□□□□□ -1.28
LINC00339-203ENST00000420503 SLC25A20O43772 301 aa7.02□□□□□ -1.29
LINC00339-203ENST00000420503 PYY3Q5JQD4 70 aa7.02□□□□□ -1.29
LINC00339-203ENST00000420503 KRTAP10-6P60371 365 aaPredicted RBP7.01□□□□□ -1.29
LINC00339-203ENST00000420503 RPS29P62273 56 aaKnown RBP7.01□□□□□ -1.29
LINC00339-203ENST00000420503 Q6ZVH6 145 aa7.01□□□□□ -1.29
LINC00339-203ENST00000420503 ST20-AS1Q8NBB2 130 aa7.01□□□□□ -1.29
LINC00339-203ENST00000420503 IGLV8-61A0A075B6I0 122 aa7□□□□□ -1.29
LINC00339-203ENST00000420503 C9orf92A6NGG3 77 aa7□□□□□ -1.29
LINC00339-203ENST00000420503 IGLV6-57P01721 117 aa7□□□□□ -1.29
LINC00339-203ENST00000420503 COX8AP10176 69 aa7□□□□□ -1.29
LINC00339-203ENST00000420503 C9orf153Q5TBE3 101 aa7□□□□□ -1.29
LINC00339-203ENST00000420503 SSBP3-AS1Q7Z2R9 100 aa7□□□□□ -1.29
LINC00339-203ENST00000420503 DLEU1O43261 78 aa6.99□□□□□ -1.29
LINC00339-203ENST00000420503 IFITM1P13164 125 aa6.99□□□□□ -1.29
LINC00339-203ENST00000420503 DDTP30046 118 aa6.99□□□□□ -1.29
LINC00339-203ENST00000420503 Q6ZRX8 168 aa6.99□□□□□ -1.29
LINC00339-203ENST00000420503 PAM16Q9Y3D7 125 aa6.99□□□□□ -1.29
LINC00339-203ENST00000420503 SPATA45Q537H7 98 aa6.98□□□□□ -1.29
LINC00339-203ENST00000420503 VAMP8Q9BV40 100 aa6.98□□□□□ -1.29
LINC00339-203ENST00000420503 HRCT1Q6UXD1 115 aa6.97□□□□□ -1.29
LINC00339-203ENST00000420503 MUSTN1Q8IVN3 82 aa6.97□□□□□ -1.29
LINC00339-203ENST00000420503 COPS9Q8WXC6 57 aa6.96□□□□□ -1.3
LINC00339-203ENST00000420503 C14orf144Q96I85 54 aa6.96□□□□□ -1.3
LINC00339-203ENST00000420503 S100A7L2Q5SY68 101 aa6.95□□□□□ -1.3
LINC00339-203ENST00000420503 LINC00518Q8N0U6 118 aa6.95□□□□□ -1.3
LINC00339-203ENST00000420503 FLGP20930 4061 aaPredicted RBP6.95□□□□□ -1.3
LINC00339-203ENST00000420503 TRAV23DV6A0A075B6W5 121 aa6.94□□□□□ -1.3
LINC00339-203ENST00000420503 CFC1BP0CG36 223 aa6.93□□□□□ -1.3
LINC00339-203ENST00000420503 S100A12P80511 92 aa6.93□□□□□ -1.3
LINC00339-203ENST00000420503 SLC25A34Q6PIV7 304 aa6.93□□□□□ -1.3
LINC00339-203ENST00000420503 C2orf91Q6ZV80 131 aa6.93□□□□□ -1.3
LINC00339-203ENST00000420503 HIGD1BQ9P298 99 aa6.93□□□□□ -1.3
LINC00339-203ENST00000420503 KRTAP4-8Q9BYQ9 185 aa6.92□□□□□ -1.3
LINC00339-203ENST00000420503 ZNF73O43830 326 aaPredicted RBP6.91□□□□□ -1.3
LINC00339-203ENST00000420503 OR13C6PQ8NH95 151 aa6.91□□□□□ -1.3
LINC00339-203ENST00000420503 A4D1N5 150 aa6.9□□□□□ -1.3
LINC00339-203ENST00000420503 HIST1H4GQ99525 98 aa6.9□□□□□ -1.3
LINC00339-203ENST00000420503 CBY1Q9Y3M2 126 aa6.9□□□□□ -1.3
LINC00339-203ENST00000420503 TRAV13-2A0A0B4J235 113 aa6.88□□□□□ -1.31
LINC00339-203ENST00000420503 H7C2G1 150 aa6.88□□□□□ -1.31
LINC00339-203ENST00000420503 A0A0G2JQZ4 141 aa6.87□□□□□ -1.31
LINC00339-203ENST00000420503 A6NDN8 102 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms