RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 SERF1AO75920 110 aa8.17□□□□□ -1.1
RPS28-201ENST00000417088 DPM2O94777 84 aa8.17□□□□□ -1.1
RPS28-201ENST00000417088 LGALS3P17931 250 aaKnown RBP8.17□□□□□ -1.1
RPS28-201ENST00000417088 HERVK_113P61574 105 aa8.17□□□□□ -1.1
RPS28-201ENST00000417088 SOSTDC1Q6X4U4 206 aa8.17□□□□□ -1.1
RPS28-201ENST00000417088 ST20-AS1Q8NBB2 130 aa8.17□□□□□ -1.1
RPS28-201ENST00000417088 PMCHL2Q9BQD1 86 aa8.17□□□□□ -1.1
RPS28-201ENST00000417088 ZNF73O43830 326 aaPredicted RBP8.16□□□□□ -1.1
RPS28-201ENST00000417088 TRGC2P03986 189 aa8.16□□□□□ -1.1
RPS28-201ENST00000417088 NPC2P61916 151 aa8.15□□□□□ -1.1
RPS28-201ENST00000417088 ADAMTSL4-AS1Q5T5F5 129 aa8.15□□□□□ -1.1
RPS28-201ENST00000417088 LCE2CQ5TA81 110 aa8.15□□□□□ -1.1
RPS28-201ENST00000417088 IGKCP01834 107 aa8.14□□□□□ -1.11
RPS28-201ENST00000417088 FABP4P15090 132 aa8.14□□□□□ -1.11
RPS28-201ENST00000417088 HSPB8Q9UJY1 196 aa8.14□□□□□ -1.11
RPS28-201ENST00000417088 A0A0J9YXY3 114 aa8.13□□□□□ -1.11
RPS28-201ENST00000417088 C5orf52A6NGY3 159 aa8.13□□□□□ -1.11
RPS28-201ENST00000417088 SPRR1BP22528 89 aa8.1□□□□□ -1.11
RPS28-201ENST00000417088 HINT1P49773 126 aaPredicted RBP8.1□□□□□ -1.11
RPS28-201ENST00000417088 KRTAP19-2Q3LHN2 52 aa8.1□□□□□ -1.11
RPS28-201ENST00000417088 E9PLD3 99 aa8.09□□□□□ -1.11
RPS28-201ENST00000417088 CBY1Q9Y3M2 126 aa8.09□□□□□ -1.11
RPS28-201ENST00000417088 HRCT1Q6UXD1 115 aa8.08□□□□□ -1.12
RPS28-201ENST00000417088 PCOTHQ58A44 107 aa8.07□□□□□ -1.12
RPS28-201ENST00000417088 LINC00308Q8TCZ7 52 aa8.07□□□□□ -1.12
RPS28-201ENST00000417088 LITAFQ99732 161 aa8.07□□□□□ -1.12
RPS28-201ENST00000417088 LIMD2Q9BT23 127 aa8.07□□□□□ -1.12
RPS28-201ENST00000417088 SPANXCQ9NY87 97 aa8.07□□□□□ -1.12
RPS28-201ENST00000417088 CRCT1Q9UGL9 99 aa8.07□□□□□ -1.12
RPS28-201ENST00000417088 SLC25A34Q6PIV7 304 aa8.06□□□□□ -1.12
RPS28-201ENST00000417088 OR13C6PQ8NH95 151 aa8.06□□□□□ -1.12
RPS28-201ENST00000417088 DHRS4-AS1Q9P1J3 65 aa8.06□□□□□ -1.12
RPS28-201ENST00000417088 C9orf92A6NGG3 77 aa8.05□□□□□ -1.12
RPS28-201ENST00000417088 MT1HP80294 61 aa8.05□□□□□ -1.12
RPS28-201ENST00000417088 LAMTOR3Q9UHA4 124 aa8.05□□□□□ -1.12
RPS28-201ENST00000417088 IGLV8-61A0A075B6I0 122 aa8.04□□□□□ -1.12
RPS28-201ENST00000417088 TIMM17BO60830 172 aa8.03□□□□□ -1.12
RPS28-201ENST00000417088 SPANXDQ9BXN6 97 aa8.03□□□□□ -1.12
RPS28-201ENST00000417088 ELOF1P60002 83 aaKnown RBP8.02□□□□□ -1.13
RPS28-201ENST00000417088 COLCA2A8K830 154 aa8.01□□□□□ -1.13
RPS28-201ENST00000417088 SYS1-DBNDD2H3BUS1 97 aa8.01□□□□□ -1.13
RPS28-201ENST00000417088 COX7BP24311 80 aa8.01□□□□□ -1.13
RPS28-201ENST00000417088 CD164Q04900 197 aa8□□□□□ -1.13
RPS28-201ENST00000417088 Q1RN00 199 aa8□□□□□ -1.13
RPS28-201ENST00000417088 C6orf99Q4VX62 202 aa8□□□□□ -1.13
RPS28-201ENST00000417088 TAL2Q16559 108 aa7.99□□□□□ -1.13
RPS28-201ENST00000417088 DEFB105AQ8NG35 78 aa7.99□□□□□ -1.13
RPS28-201ENST00000417088 PRO1933Q9H354 126 aa7.99□□□□□ -1.13
RPS28-201ENST00000417088 ZNF815PA8K554 130 aa7.98□□□□□ -1.13
RPS28-201ENST00000417088 CFC1BP0CG36 223 aa7.98□□□□□ -1.13
RPS28-201ENST00000417088 LINC00518Q8N0U6 118 aa7.98□□□□□ -1.13
RPS28-201ENST00000417088 TTTY13Q9BZ97 58 aa7.98□□□□□ -1.13
RPS28-201ENST00000417088 TEX49A0A1B0GTD5 131 aa7.97□□□□□ -1.13
RPS28-201ENST00000417088 H7C2G1 150 aa7.97□□□□□ -1.13
RPS28-201ENST00000417088 LINC01545Q5VT33 79 aa7.97□□□□□ -1.13
RPS28-201ENST00000417088 Q5XG85 94 aa7.96□□□□□ -1.14
RPS28-201ENST00000417088 SMIM29Q86T20 159 aa7.96□□□□□ -1.14
RPS28-201ENST00000417088 C1orf195Q5TG92 126 aa7.95□□□□□ -1.14
RPS28-201ENST00000417088 SLC7A5P1Q8MH63 180 aa7.95□□□□□ -1.14
RPS28-201ENST00000417088 AKR1D1P51857 326 aa7.94□□□□□ -1.14
RPS28-201ENST00000417088 PET117Q6UWS5 81 aa7.94□□□□□ -1.14
RPS28-201ENST00000417088 A0A0G2JQZ4 141 aa7.93□□□□□ -1.14
RPS28-201ENST00000417088 TRBV7-6A0A0J9YX20 115 aa7.93□□□□□ -1.14
RPS28-201ENST00000417088 LORP23490 312 aaPredicted RBP7.93□□□□□ -1.14
RPS28-201ENST00000417088 KRTAP10-6P60371 365 aaPredicted RBP7.93□□□□□ -1.14
RPS28-201ENST00000417088 IGLV5-48A0A075B6I7 105 aa7.92□□□□□ -1.14
RPS28-201ENST00000417088 HIST1H2BKO60814 126 aa7.92□□□□□ -1.14
RPS28-201ENST00000417088 HIST1H2BJP06899 126 aa7.92□□□□□ -1.14
RPS28-201ENST00000417088 HIST1H2BOP23527 126 aa7.92□□□□□ -1.14
RPS28-201ENST00000417088 HIST1H2BBP33778 126 aa7.92□□□□□ -1.14
RPS28-201ENST00000417088 HIST1H2BDP58876 126 aa7.92□□□□□ -1.14
RPS28-201ENST00000417088 HIST1H2BCP62807 126 aa7.92□□□□□ -1.14
RPS28-201ENST00000417088 HIST2H2BEQ16778 126 aa7.92□□□□□ -1.14
RPS28-201ENST00000417088 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.92□□□□□ -1.14
RPS28-201ENST00000417088 HIST1H2BHQ93079 126 aa7.92□□□□□ -1.14
RPS28-201ENST00000417088 HIST1H2BNQ99877 126 aa7.92□□□□□ -1.14
RPS28-201ENST00000417088 HIST1H2BMQ99879 126 aa7.92□□□□□ -1.14
RPS28-201ENST00000417088 A0A1B0GWB2 263 aa7.91□□□□□ -1.14
RPS28-201ENST00000417088 RPL37P61927 97 aaKnown RBP7.9□□□□□ -1.14
RPS28-201ENST00000417088 C3orf79P0CE67 100 aa7.89□□□□□ -1.15
RPS28-201ENST00000417088 A6NDN8 102 aa7.88□□□□□ -1.15
RPS28-201ENST00000417088 SCGB1D4Q6XE38 83 aa7.88□□□□□ -1.15
RPS28-201ENST00000417088 IFITM1P13164 125 aa7.87□□□□□ -1.15
RPS28-201ENST00000417088 M0R2T5 61 aa7.86□□□□□ -1.15
RPS28-201ENST00000417088 COPS9Q8WXC6 57 aa7.86□□□□□ -1.15
RPS28-201ENST00000417088 FLGP20930 4061 aaPredicted RBP7.86□□□□□ -1.15
RPS28-201ENST00000417088 ANKRD39Q53RE8 183 aa7.85□□□□□ -1.15
RPS28-201ENST00000417088 MUSTN1Q8IVN3 82 aa7.85□□□□□ -1.15
RPS28-201ENST00000417088 A4D1N5 150 aa7.84□□□□□ -1.15
RPS28-201ENST00000417088 KRTDAPP60985 99 aa7.84□□□□□ -1.15
RPS28-201ENST00000417088 COX6B2Q6YFQ2 88 aa7.84□□□□□ -1.15
RPS28-201ENST00000417088 Q6ZVH6 145 aa7.84□□□□□ -1.15
RPS28-201ENST00000417088 TCL1BO95988 128 aa7.83□□□□□ -1.16
RPS28-201ENST00000417088 SMIM11BQ8TCY0 68 aa7.82□□□□□ -1.16
RPS28-201ENST00000417088 NHP2Q9NX24 153 aaKnown RBP7.82□□□□□ -1.16
RPS28-201ENST00000417088 TRAV13-2A0A0B4J235 113 aa7.8□□□□□ -1.16
RPS28-201ENST00000417088 COA6Q5JTJ3 125 aaKnown RBP7.8□□□□□ -1.16
RPS28-201ENST00000417088 PCP2Q8IVA1 136 aa7.8□□□□□ -1.16
RPS28-201ENST00000417088 ATOH7Q8N100 152 aa7.79□□□□□ -1.16
RPS28-201ENST00000417088 C20orf202A1L168 122 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms