RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 SPANXB1Q9NS25 103 aaPredicted RBP8.9□□□□□ -0.98
SBDSP1-201ENST00000415772 SPRR1AP35321 89 aa8.89□□□□□ -0.99
SBDSP1-201ENST00000415772 DAND5Q8N907 189 aa8.89□□□□□ -0.99
SBDSP1-201ENST00000415772 MUC17Q685J3 4493 aa8.89□□□□□ -0.99
SBDSP1-201ENST00000415772 NCR3O14931 201 aa8.88□□□□□ -0.99
SBDSP1-201ENST00000415772 SNRPEP62304 92 aaKnown RBP8.87□□□□□ -0.99
SBDSP1-201ENST00000415772 Q8NBF4 154 aa8.87□□□□□ -0.99
SBDSP1-201ENST00000415772 CBY1Q9Y3M2 126 aa8.87□□□□□ -0.99
SBDSP1-201ENST00000415772 TRBV10-3A0A0K0K1G6 114 aa8.86□□□□□ -0.99
SBDSP1-201ENST00000415772 ZNF815PA8K554 130 aa8.86□□□□□ -0.99
SBDSP1-201ENST00000415772 S100A2P29034 98 aa8.86□□□□□ -0.99
SBDSP1-201ENST00000415772 ETDCA0A1B0GVM5 59 aa8.85□□□□□ -0.99
SBDSP1-201ENST00000415772 S100A6P06703 90 aa8.85□□□□□ -0.99
SBDSP1-201ENST00000415772 DDTP30046 118 aa8.85□□□□□ -0.99
SBDSP1-201ENST00000415772 SEC61BP60468 96 aaKnown RBP8.85□□□□□ -0.99
SBDSP1-201ENST00000415772 ADAMTSL4-AS1Q5T5F5 129 aa8.85□□□□□ -0.99
SBDSP1-201ENST00000415772 KRTAP4-16G5E9R7 235 aaPredicted RBP8.84□□□□□ -0.99
SBDSP1-201ENST00000415772 SPINK1P00995 79 aa8.84□□□□□ -0.99
SBDSP1-201ENST00000415772 S100A7L2Q5SY68 101 aa8.84□□□□□ -0.99
SBDSP1-201ENST00000415772 HIST3H2BBQ8N257 126 aa8.84□□□□□ -0.99
SBDSP1-201ENST00000415772 LITAFQ99732 161 aa8.84□□□□□ -0.99
SBDSP1-201ENST00000415772 IGLV6-57P01721 117 aa8.83□□□□□ -1
SBDSP1-201ENST00000415772 SPANXCQ9NY87 97 aa8.83□□□□□ -1
SBDSP1-201ENST00000415772 KRTAP13-3Q3SY46 172 aa8.82□□□□□ -1
SBDSP1-201ENST00000415772 ASB16-AS1Q495Z4 193 aa8.82□□□□□ -1
SBDSP1-201ENST00000415772 SOSTDC1Q6X4U4 206 aa8.82□□□□□ -1
SBDSP1-201ENST00000415772 LINC00308Q8TCZ7 52 aa8.82□□□□□ -1
SBDSP1-201ENST00000415772 SMCR5Q8TEV8 140 aa8.82□□□□□ -1
SBDSP1-201ENST00000415772 COPS9Q8WXC6 57 aa8.82□□□□□ -1
SBDSP1-201ENST00000415772 HIST1H2BLQ99880 126 aa8.82□□□□□ -1
SBDSP1-201ENST00000415772 LCE2BO14633 110 aa8.81□□□□□ -1
SBDSP1-201ENST00000415772 Q6ZVH6 145 aa8.81□□□□□ -1
SBDSP1-201ENST00000415772 SCGB1D4Q6XE38 83 aa8.8□□□□□ -1
SBDSP1-201ENST00000415772 LINC00518Q8N0U6 118 aa8.8□□□□□ -1
SBDSP1-201ENST00000415772 IGLV9-49A0A0B4J1Y8 123 aa8.79□□□□□ -1
SBDSP1-201ENST00000415772 NPC2P61916 151 aa8.79□□□□□ -1
SBDSP1-201ENST00000415772 ANKRD39Q53RE8 183 aa8.79□□□□□ -1
SBDSP1-201ENST00000415772 GAGE2AQ6NT46 116 aa8.79□□□□□ -1
SBDSP1-201ENST00000415772 TRAV23DV6A0A075B6W5 121 aa8.78□□□□□ -1
SBDSP1-201ENST00000415772 B5MCH6 92 aa8.78□□□□□ -1
SBDSP1-201ENST00000415772 EIF4EBP3O60516 100 aaPredicted RBP8.78□□□□□ -1
SBDSP1-201ENST00000415772 IFITM1P13164 125 aa8.78□□□□□ -1
SBDSP1-201ENST00000415772 JOSD1Q15040 202 aaPredicted RBP8.78□□□□□ -1
SBDSP1-201ENST00000415772 SPANXDQ9BXN6 97 aa8.78□□□□□ -1
SBDSP1-201ENST00000415772 TTTY13Q9BZ97 58 aa8.78□□□□□ -1
SBDSP1-201ENST00000415772 HSBP1L1C9JCN9 74 aa8.77□□□□□ -1.01
SBDSP1-201ENST00000415772 HINT1P49773 126 aaPredicted RBP8.77□□□□□ -1.01
SBDSP1-201ENST00000415772 MOBPQ13875 183 aa8.77□□□□□ -1.01
SBDSP1-201ENST00000415772 Q6ZRX8 168 aa8.77□□□□□ -1.01
SBDSP1-201ENST00000415772 ATOH7Q8N100 152 aa8.77□□□□□ -1.01
SBDSP1-201ENST00000415772 ZNF73O43830 326 aaPredicted RBP8.75□□□□□ -1.01
SBDSP1-201ENST00000415772 C5orf52A6NGY3 159 aa8.74□□□□□ -1.01
SBDSP1-201ENST00000415772 SLC25A20O43772 301 aa8.74□□□□□ -1.01
SBDSP1-201ENST00000415772 SSBP3-AS1Q7Z2R9 100 aa8.74□□□□□ -1.01
SBDSP1-201ENST00000415772 RPS29P62273 56 aaKnown RBP8.73□□□□□ -1.01
SBDSP1-201ENST00000415772 LINC00483Q53H64 154 aa8.73□□□□□ -1.01
SBDSP1-201ENST00000415772 PCP2Q8IVA1 136 aa8.73□□□□□ -1.01
SBDSP1-201ENST00000415772 OR13C6PQ8NH95 151 aa8.73□□□□□ -1.01
SBDSP1-201ENST00000415772 C9orf153Q5TBE3 101 aa8.71□□□□□ -1.02
SBDSP1-201ENST00000415772 Q8N377 158 aa8.71□□□□□ -1.02
SBDSP1-201ENST00000415772 Q9BRP9 147 aa8.71□□□□□ -1.02
SBDSP1-201ENST00000415772 SCGB1D1O95968 90 aa8.68□□□□□ -1.02
SBDSP1-201ENST00000415772 MUSTN1Q8IVN3 82 aa8.68□□□□□ -1.02
SBDSP1-201ENST00000415772 DHRS4-AS1Q9P1J3 65 aa8.68□□□□□ -1.02
SBDSP1-201ENST00000415772 TRBV7-6A0A0J9YX20 115 aa8.67□□□□□ -1.02
SBDSP1-201ENST00000415772 ERC2-IT1O76042 136 aa8.67□□□□□ -1.02
SBDSP1-201ENST00000415772 KRTAP4-1Q9BYQ7 146 aa8.67□□□□□ -1.02
SBDSP1-201ENST00000415772 TRAV13-2A0A0B4J235 113 aa8.65□□□□□ -1.02
SBDSP1-201ENST00000415772 XP32Q5T750 250 aa8.65□□□□□ -1.02
SBDSP1-201ENST00000415772 COX7BP24311 80 aa8.64□□□□□ -1.03
SBDSP1-201ENST00000415772 ELOF1P60002 83 aaKnown RBP8.64□□□□□ -1.03
SBDSP1-201ENST00000415772 C6orf99Q4VX62 202 aa8.64□□□□□ -1.03
SBDSP1-201ENST00000415772 A6NDN8 102 aa8.63□□□□□ -1.03
SBDSP1-201ENST00000415772 SLC25A34Q6PIV7 304 aa8.63□□□□□ -1.03
SBDSP1-201ENST00000415772 A0A1B0GWB2 263 aa8.62□□□□□ -1.03
SBDSP1-201ENST00000415772 A4D1N5 150 aa8.62□□□□□ -1.03
SBDSP1-201ENST00000415772 DLEU1O43261 78 aa8.62□□□□□ -1.03
SBDSP1-201ENST00000415772 CRCT1Q9UGL9 99 aa8.62□□□□□ -1.03
SBDSP1-201ENST00000415772 COX8AP10176 69 aa8.61□□□□□ -1.03
SBDSP1-201ENST00000415772 SPRR1BP22528 89 aa8.61□□□□□ -1.03
SBDSP1-201ENST00000415772 LIMD2Q9BT23 127 aa8.61□□□□□ -1.03
SBDSP1-201ENST00000415772 IGLV8-61A0A075B6I0 122 aa8.57□□□□□ -1.04
SBDSP1-201ENST00000415772 HRCT1Q6UXD1 115 aa8.57□□□□□ -1.04
SBDSP1-201ENST00000415772 ST20-AS1Q8NBB2 130 aa8.57□□□□□ -1.04
SBDSP1-201ENST00000415772 NHP2Q9NX24 153 aaKnown RBP8.57□□□□□ -1.04
SBDSP1-201ENST00000415772 CFC1BP0CG36 223 aa8.56□□□□□ -1.04
SBDSP1-201ENST00000415772 VAMP3Q15836 100 aa8.56□□□□□ -1.04
SBDSP1-201ENST00000415772 HIST1H4GQ99525 98 aa8.56□□□□□ -1.04
SBDSP1-201ENST00000415772 LAMTOR3Q9UHA4 124 aa8.56□□□□□ -1.04
SBDSP1-201ENST00000415772 C9orf92A6NGG3 77 aa8.55□□□□□ -1.04
SBDSP1-201ENST00000415772 PCOTHQ58A44 107 aa8.55□□□□□ -1.04
SBDSP1-201ENST00000415772 SMIM11BQ8TCY0 68 aa8.55□□□□□ -1.04
SBDSP1-201ENST00000415772 TEX49A0A1B0GTD5 131 aa8.54□□□□□ -1.04
SBDSP1-201ENST00000415772 TAL2Q16559 108 aa8.54□□□□□ -1.04
SBDSP1-201ENST00000415772 VAMP8Q9BV40 100 aa8.54□□□□□ -1.04
SBDSP1-201ENST00000415772 HIGD1BQ9P298 99 aa8.54□□□□□ -1.04
SBDSP1-201ENST00000415772 FSIP2Q5CZC0 6907 aa8.54□□□□□ -1.04
SBDSP1-201ENST00000415772 SPATA45Q537H7 98 aa8.53□□□□□ -1.04
SBDSP1-201ENST00000415772 PAM16Q9Y3D7 125 aa8.53□□□□□ -1.04
SBDSP1-201ENST00000415772 IGLV5-48A0A075B6I7 105 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms