RNA–Protein interactions for RNA: ENST00000415620.1

LINC00428-201, long intergenic non-protein coding RNA 428, humanhuman

TSL 5 BASIC

Gene LINC00428, Length 227 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00428-201ENST00000415620 SMKR1H3BMG3 65 aa0.49□□□□□ -2.33
LINC00428-201ENST00000415620 PPP1R2P9O14990 202 aa0.49□□□□□ -2.33
LINC00428-201ENST00000415620 ATP5LO75964 103 aa0.49□□□□□ -2.33
LINC00428-201ENST00000415620 SFT2D2O95562 160 aa0.49□□□□□ -2.33
LINC00428-201ENST00000415620 STAG3L2P0CL84 134 aa0.49□□□□□ -2.33
LINC00428-201ENST00000415620 STAG3L3P0CL85 134 aa0.49□□□□□ -2.33
LINC00428-201ENST00000415620 AQP4P55087 323 aa0.49□□□□□ -2.33
LINC00428-201ENST00000415620 LINC00313P59037 77 aa0.49□□□□□ -2.33
LINC00428-201ENST00000415620 TMEM128Q5BJH2 165 aa0.49□□□□□ -2.33
LINC00428-201ENST00000415620 TEX261Q6UWH6 196 aa0.49□□□□□ -2.33
LINC00428-201ENST00000415620 FA2HQ7L5A8 372 aa0.49□□□□□ -2.33
LINC00428-201ENST00000415620 STX12Q86Y82 276 aa0.49□□□□□ -2.33
LINC00428-201ENST00000415620 C9orf16Q9BUW7 83 aa0.49□□□□□ -2.33
LINC00428-201ENST00000415620 NKX6-2Q9C056 277 aaPredicted RBP0.49□□□□□ -2.33
LINC00428-201ENST00000415620 KCNIP2Q9NS61 270 aa0.49□□□□□ -2.33
LINC00428-201ENST00000415620 S4R3F8 94 aa0.49□□□□□ -2.33
LINC00428-201ENST00000415620 A0A1W2PRE2 83 aa0.48□□□□□ -2.33
LINC00428-201ENST00000415620 F2Z2F3 143 aa0.48□□□□□ -2.33
LINC00428-201ENST00000415620 C17orf112F2Z3M2 114 aa0.48□□□□□ -2.33
LINC00428-201ENST00000415620 SPINK8P0C7L1 97 aa0.48□□□□□ -2.33
LINC00428-201ENST00000415620 DDTP30046 118 aa0.48□□□□□ -2.33
LINC00428-201ENST00000415620 BTCP35070 178 aa0.48□□□□□ -2.33
LINC00428-201ENST00000415620 HBG1P69891 147 aa0.48□□□□□ -2.33
LINC00428-201ENST00000415620 HBG2P69892 147 aa0.48□□□□□ -2.33
LINC00428-201ENST00000415620 JOSD1Q15040 202 aaPredicted RBP0.48□□□□□ -2.33
LINC00428-201ENST00000415620 TAL2Q16559 108 aa0.48□□□□□ -2.33
LINC00428-201ENST00000415620 ATP6V1FQ16864 119 aa0.48□□□□□ -2.33
LINC00428-201ENST00000415620 ZFP1Q6P2D0 407 aa0.48□□□□□ -2.33
LINC00428-201ENST00000415620 TEX43Q6ZNM6 134 aa0.48□□□□□ -2.33
LINC00428-201ENST00000415620 BOD1L2Q8IYS8 172 aa0.48□□□□□ -2.33
LINC00428-201ENST00000415620 HIST1H2BAQ96A08 127 aa0.48□□□□□ -2.33
LINC00428-201ENST00000415620 TMEM141Q96I45 108 aa0.48□□□□□ -2.33
LINC00428-201ENST00000415620 PRRT1Q99946 306 aa0.48□□□□□ -2.33
LINC00428-201ENST00000415620 VCX3BQ9H321 246 aa0.48□□□□□ -2.33
LINC00428-201ENST00000415620 VCX3AQ9NNX9 186 aa0.48□□□□□ -2.33
LINC00428-201ENST00000415620 TEX49A0A1B0GTD5 131 aa0.47□□□□□ -2.33
LINC00428-201ENST00000415620 SMIM31A0A1B0GVY4 71 aa0.47□□□□□ -2.33
LINC00428-201ENST00000415620 ATP5HO75947 161 aa0.47□□□□□ -2.33
LINC00428-201ENST00000415620 SIX6O95475 246 aa0.47□□□□□ -2.33
LINC00428-201ENST00000415620 APOA1P02647 267 aa0.47□□□□□ -2.33
LINC00428-201ENST00000415620 AKAIN1P0CW23 69 aa0.47□□□□□ -2.33
LINC00428-201ENST00000415620 IFI27P40305 119 aaPredicted RBP0.47□□□□□ -2.33
LINC00428-201ENST00000415620 CDC34P49427 236 aaPredicted RBP0.47□□□□□ -2.33
LINC00428-201ENST00000415620 HERVK_113P63121 156 aa0.47□□□□□ -2.33
LINC00428-201ENST00000415620 S100A12P80511 92 aa0.47□□□□□ -2.33
LINC00428-201ENST00000415620 COX17Q14061 63 aa0.47□□□□□ -2.33
LINC00428-201ENST00000415620 PDZD11Q5EBL8 140 aa0.47□□□□□ -2.33
LINC00428-201ENST00000415620 C8orf59Q8N0T1 100 aaPredicted RBP0.47□□□□□ -2.33
LINC00428-201ENST00000415620 SIGMAR1Q99720 223 aa0.47□□□□□ -2.33
LINC00428-201ENST00000415620 C2orf88Q9BSF0 95 aa0.47□□□□□ -2.33
LINC00428-201ENST00000415620 CNFNQ9BYD5 112 aa0.47□□□□□ -2.33
LINC00428-201ENST00000415620 NHP2Q9NX24 153 aaKnown RBP0.47□□□□□ -2.33
LINC00428-201ENST00000415620 TRBV20OR9-2A0A075B6H5 130 aa0.46□□□□□ -2.34
LINC00428-201ENST00000415620 TRAV23DV6A0A075B6W5 121 aa0.46□□□□□ -2.34
LINC00428-201ENST00000415620 A0A1B0GVX0 72 aa0.46□□□□□ -2.34
LINC00428-201ENST00000415620 TCAPO15273 167 aa0.46□□□□□ -2.34
LINC00428-201ENST00000415620 AKR1C3P42330 323 aa0.46□□□□□ -2.34
LINC00428-201ENST00000415620 C4orf26Q17RF5 130 aa0.46□□□□□ -2.34
LINC00428-201ENST00000415620 C9orf62Q8N4C0 152 aa0.46□□□□□ -2.34
LINC00428-201ENST00000415620 SCGB3A2Q96PL1 93 aa0.46□□□□□ -2.34
LINC00428-201ENST00000415620 TMEM167BQ9NRX6 74 aa0.46□□□□□ -2.34
LINC00428-201ENST00000415620 A0A0D9SG42 100 aa0.45□□□□□ -2.34
LINC00428-201ENST00000415620 LOC389332A0A1B0GUA5 103 aa0.45□□□□□ -2.34
LINC00428-201ENST00000415620 CXorf1O96002 111 aa0.45□□□□□ -2.34
LINC00428-201ENST00000415620 RAB4AP20338 218 aa0.45□□□□□ -2.34
LINC00428-201ENST00000415620 LINC00158P58513 81 aa0.45□□□□□ -2.34
LINC00428-201ENST00000415620 IL15RAQ13261 267 aa0.45□□□□□ -2.34
LINC00428-201ENST00000415620 PMVKQ15126 192 aa0.45□□□□□ -2.34
LINC00428-201ENST00000415620 LINC01554Q52M75 96 aa0.45□□□□□ -2.34
LINC00428-201ENST00000415620 SMIM15Q7Z3B0 74 aa0.45□□□□□ -2.34
LINC00428-201ENST00000415620 BAGE2Q86Y30 109 aa0.45□□□□□ -2.34
LINC00428-201ENST00000415620 AMN1Q8IY45 258 aa0.45□□□□□ -2.34
LINC00428-201ENST00000415620 MIR7-3HGQ8N6C7 128 aa0.45□□□□□ -2.34
LINC00428-201ENST00000415620 MCFD2Q8NI22 146 aa0.45□□□□□ -2.34
LINC00428-201ENST00000415620 CLEC2BQ92478 149 aa0.45□□□□□ -2.34
LINC00428-201ENST00000415620 IGLV5-48A0A075B6I7 105 aa0.44□□□□□ -2.34
LINC00428-201ENST00000415620 IGHV6-1A0A0B4J1U7 121 aa0.44□□□□□ -2.34
LINC00428-201ENST00000415620 TMEM223A0PJW6 202 aa0.44□□□□□ -2.34
LINC00428-201ENST00000415620 XKRY2A2RUG3 117 aa0.44□□□□□ -2.34
LINC00428-201ENST00000415620 FAM25AB3EWG3 89 aa0.44□□□□□ -2.34
LINC00428-201ENST00000415620 FAM25CB3EWG5 89 aa0.44□□□□□ -2.34
LINC00428-201ENST00000415620 FAM25GB3EWG6 89 aa0.44□□□□□ -2.34
LINC00428-201ENST00000415620 ATP6V1G2O95670 118 aa0.44□□□□□ -2.34
LINC00428-201ENST00000415620 PVALBP20472 110 aaPredicted RBP0.44□□□□□ -2.34
LINC00428-201ENST00000415620 RPL35P42766 123 aaKnown RBP0.44□□□□□ -2.34
LINC00428-201ENST00000415620 KRTAP12-1P59990 96 aa0.44□□□□□ -2.34
LINC00428-201ENST00000415620 STOML3Q8TAV4 291 aa0.44□□□□□ -2.34
LINC00428-201ENST00000415620 SMIM2Q9BVW6 85 aa0.44□□□□□ -2.34
LINC00428-201ENST00000415620 SMIM3Q9BZL3 60 aa0.44□□□□□ -2.34
LINC00428-201ENST00000415620 VCX2Q9H322 139 aa0.44□□□□□ -2.34
LINC00428-201ENST00000415620 LINC00472Q9H8W2 130 aa0.44□□□□□ -2.34
LINC00428-201ENST00000415620 TNFSF18Q9UNG2 199 aa0.44□□□□□ -2.34
LINC00428-201ENST00000415620 IGKV3D-7A0A0C4DH55 119 aa0.43□□□□□ -2.34
LINC00428-201ENST00000415620 SSBP1Q04837 148 aaKnown RBP0.43□□□□□ -2.34
LINC00428-201ENST00000415620 ZNF726P1Q15940 193 aa0.43□□□□□ -2.34
LINC00428-201ENST00000415620 MRPL51Q4U2R6 128 aaKnown RBP0.43□□□□□ -2.34
LINC00428-201ENST00000415620 COA6Q5JTJ3 125 aaKnown RBP0.43□□□□□ -2.34
LINC00428-201ENST00000415620 ENKURQ8TC29 256 aa0.43□□□□□ -2.34
LINC00428-201ENST00000415620 SMIM4Q8WVI0 70 aa0.43□□□□□ -2.34
LINC00428-201ENST00000415620 NXT2Q9NPJ8 142 aaKnown RBP0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms