RNA–Protein interactions for RNA: ENST00000415039.7

PSMD3-202, Transcript of proteasome 26S subunit, non-ATPase 3, humanhuman

TSL 2

Gene PSMD3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD3-202ENST00000415039 LOC110117498A0A087WWA1 95 aa13.96□□□□□ -0.18
PSMD3-202ENST00000415039 FAM168BA1KXE4 195 aa13.96□□□□□ -0.18
PSMD3-202ENST00000415039 PDE6GP18545 87 aa13.96□□□□□ -0.18
PSMD3-202ENST00000415039 MRPL55Q7Z7F7 128 aaKnown RBP13.96□□□□□ -0.18
PSMD3-202ENST00000415039 SPRR1AP35321 89 aa13.95□□□□□ -0.18
PSMD3-202ENST00000415039 KRTAP7-1Q8IUC3 87 aa13.95□□□□□ -0.18
PSMD3-202ENST00000415039 COL7A1Q02388 2944 aa13.93□□□□□ -0.18
PSMD3-202ENST00000415039 DHRS4-AS1Q9P1J3 65 aa13.93□□□□□ -0.18
PSMD3-202ENST00000415039 A0A1B0GV72 72 aa13.92□□□□□ -0.18
PSMD3-202ENST00000415039 KRTAP4-16G5E9R7 235 aaPredicted RBP13.92□□□□□ -0.18
PSMD3-202ENST00000415039 FAM19A5Q7Z5A7 132 aaPredicted RBP13.92□□□□□ -0.18
PSMD3-202ENST00000415039 LINC00846Q9NV44 126 aa13.91□□□□□ -0.18
PSMD3-202ENST00000415039 ETDCA0A1B0GVM5 59 aa13.9□□□□□ -0.18
PSMD3-202ENST00000415039 LRCOL1A6NCL2 159 aa13.9□□□□□ -0.18
PSMD3-202ENST00000415039 RPL37AP8A6NKH3 93 aa13.9□□□□□ -0.18
PSMD3-202ENST00000415039 Q6ZQT0 140 aa13.9□□□□□ -0.18
PSMD3-202ENST00000415039 Q6ZRX8 168 aa13.9□□□□□ -0.18
PSMD3-202ENST00000415039 DSCR8Q96T75 97 aa13.9□□□□□ -0.18
PSMD3-202ENST00000415039 A0A096LNI7 61 aa13.89□□□□□ -0.19
PSMD3-202ENST00000415039 B5MCH6 92 aa13.89□□□□□ -0.19
PSMD3-202ENST00000415039 Q6ZRN7 208 aaPredicted RBP13.88□□□□□ -0.19
PSMD3-202ENST00000415039 NDUFV3P56181 108 aaKnown RBP13.88□□□□□ -0.19
PSMD3-202ENST00000415039 Q6JHZ5 121 aa13.86□□□□□ -0.19
PSMD3-202ENST00000415039 C9orf163Q8N9P6 203 aa13.86□□□□□ -0.19
PSMD3-202ENST00000415039 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.85□□□□□ -0.19
PSMD3-202ENST00000415039 TRBV7-4A0A0J9YYF1 115 aa13.83□□□□□ -0.2
PSMD3-202ENST00000415039 REG3GQ6UW15 175 aa13.83□□□□□ -0.2
PSMD3-202ENST00000415039 IGKV2-24A0A0C4DH68 120 aa13.82□□□□□ -0.2
PSMD3-202ENST00000415039 A0A1W2PNN7 141 aa13.79□□□□□ -0.2
PSMD3-202ENST00000415039 Q9BRP9 147 aa13.79□□□□□ -0.2
PSMD3-202ENST00000415039 UBL5Q9BZL1 73 aa13.79□□□□□ -0.2
PSMD3-202ENST00000415039 LINC00474Q9P2X8 69 aa13.79□□□□□ -0.2
PSMD3-202ENST00000415039 ATP5EP2Q5VTU8 51 aa13.79□□□□□ -0.2
PSMD3-202ENST00000415039 ANAPC13Q9BS18 74 aa13.78□□□□□ -0.2
PSMD3-202ENST00000415039 Q8N377 158 aa13.76□□□□□ -0.21
PSMD3-202ENST00000415039 LINC01547P58512 204 aaPredicted RBP13.75□□□□□ -0.21
PSMD3-202ENST00000415039 IGLV5-48A0A075B6I7 105 aa13.75□□□□□ -0.21
PSMD3-202ENST00000415039 M0R2N4 97 aa13.75□□□□□ -0.21
PSMD3-202ENST00000415039 Q6ZR54 194 aa13.75□□□□□ -0.21
PSMD3-202ENST00000415039 PLECQ15149 4684 aaKnown RBP13.74□□□□□ -0.21
PSMD3-202ENST00000415039 UBE2BP63146 152 aa13.73□□□□□ -0.21
PSMD3-202ENST00000415039 PRKDCP78527 4128 aaKnown RBP13.73□□□□□ -0.21
PSMD3-202ENST00000415039 DNAH7Q8WXX0 4024 aa13.72□□□□□ -0.21
PSMD3-202ENST00000415039 DEFB105AQ8NG35 78 aa13.72□□□□□ -0.21
PSMD3-202ENST00000415039 CSMD3Q7Z407 3707 aa13.72□□□□□ -0.21
PSMD3-202ENST00000415039 A0A087WTM6 91 aa13.71□□□□□ -0.22
PSMD3-202ENST00000415039 IGKV3D-7A0A0C4DH55 119 aa13.71□□□□□ -0.22
PSMD3-202ENST00000415039 DNHD1Q96M86 4753 aa13.7□□□□□ -0.22
PSMD3-202ENST00000415039 CHTF8P0CG12 524 aa13.69□□□□□ -0.22
PSMD3-202ENST00000415039 FAM236AA0A1B0GUQ0 79 aa13.68□□□□□ -0.22
PSMD3-202ENST00000415039 FAM236BA0A1B0GV22 79 aa13.68□□□□□ -0.22
PSMD3-202ENST00000415039 VPS13DQ5THJ4 4388 aa13.68□□□□□ -0.22
PSMD3-202ENST00000415039 LYSTQ99698 3801 aa13.68□□□□□ -0.22
PSMD3-202ENST00000415039 FAM19A1Q7Z5A9 133 aa13.67□□□□□ -0.22
PSMD3-202ENST00000415039 DNAH10Q8IVF4 4471 aa13.66□□□□□ -0.22
PSMD3-202ENST00000415039 H0Y9J4 135 aa13.66□□□□□ -0.22
PSMD3-202ENST00000415039 ERC2-IT1O76042 136 aa13.66□□□□□ -0.22
PSMD3-202ENST00000415039 PHF5AQ7RTV0 110 aaKnown RBP13.66□□□□□ -0.22
PSMD3-202ENST00000415039 ST20-AS1Q8NBB2 130 aa13.65□□□□□ -0.22
PSMD3-202ENST00000415039 A0A1B0GW54 56 aa13.64□□□□□ -0.23
PSMD3-202ENST00000415039 Q6ZVQ6 151 aa13.64□□□□□ -0.23
PSMD3-202ENST00000415039 TNP2Q05952 138 aa13.63□□□□□ -0.23
PSMD3-202ENST00000415039 EPM2AB3EWF7 344 aa13.62□□□□□ -0.23
PSMD3-202ENST00000415039 HIST1H4AP62805 103 aaKnown RBP13.62□□□□□ -0.23
PSMD3-202ENST00000415039 STARD9Q9P2P6 4700 aa13.62□□□□□ -0.23
PSMD3-202ENST00000415039 C1orf134Q5TEV5 83 aa13.62□□□□□ -0.23
PSMD3-202ENST00000415039 SPACA4Q8TDM5 124 aa13.61□□□□□ -0.23
PSMD3-202ENST00000415039 WWC2-AS2Q96NR7 200 aa13.59□□□□□ -0.23
PSMD3-202ENST00000415039 MEGF8Q7Z7M0 2845 aa13.59□□□□□ -0.23
PSMD3-202ENST00000415039 CXCL6P80162 114 aa13.58□□□□□ -0.23
PSMD3-202ENST00000415039 PRLHP81277 87 aa13.58□□□□□ -0.23
PSMD3-202ENST00000415039 DPH3Q96FX2 82 aa13.58□□□□□ -0.24
PSMD3-202ENST00000415039 RTL8CO15255 209 aa13.57□□□□□ -0.24
PSMD3-202ENST00000415039 ATOX1O00244 68 aa13.56□□□□□ -0.24
PSMD3-202ENST00000415039 FUSP35637 526 aaKnown RBP eCLIP13.56□□□□□ -0.24
PSMD3-202ENST00000415039 KRTAP11-1Q8IUC1 163 aa13.56□□□□□ -0.24
PSMD3-202ENST00000415039 C3orf22Q8N5N4 141 aa13.56□□□□□ -0.24
PSMD3-202ENST00000415039 PANO1I0J062 215 aa13.55□□□□□ -0.24
PSMD3-202ENST00000415039 HAMPP81172 84 aa13.55□□□□□ -0.24
PSMD3-202ENST00000415039 C1orf137Q5JT78 98 aa13.55□□□□□ -0.24
PSMD3-202ENST00000415039 F8WEM9 126 aa13.54□□□□□ -0.24
PSMD3-202ENST00000415039 LY6G6CO95867 125 aa13.54□□□□□ -0.24
PSMD3-202ENST00000415039 SMIM29Q86T20 159 aa13.54□□□□□ -0.24
PSMD3-202ENST00000415039 HIGD2AQ9BW72 106 aa13.54□□□□□ -0.24
PSMD3-202ENST00000415039 TENM2Q9NT68 2774 aa13.54□□□□□ -0.24
PSMD3-202ENST00000415039 BCE1O60756 84 aa13.54□□□□□ -0.24
PSMD3-202ENST00000415039 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.53□□□□□ -0.24
PSMD3-202ENST00000415039 UBE2AP49459 152 aa13.52□□□□□ -0.25
PSMD3-202ENST00000415039 LINC00476Q8WZB0 136 aa13.52□□□□□ -0.25
PSMD3-202ENST00000415039 A0A087WVE0 104 aa13.51□□□□□ -0.25
PSMD3-202ENST00000415039 Q8NBF4 154 aa13.51□□□□□ -0.25
PSMD3-202ENST00000415039 SPRR1BP22528 89 aa13.5□□□□□ -0.25
PSMD3-202ENST00000415039 IGLV8-61A0A075B6I0 122 aa13.49□□□□□ -0.25
PSMD3-202ENST00000415039 NREPQ16612 68 aa13.49□□□□□ -0.25
PSMD3-202ENST00000415039 A0A1W2PNM2 257 aa13.49□□□□□ -0.25
PSMD3-202ENST00000415039 SPRR4Q96PI1 79 aa13.49□□□□□ -0.25
PSMD3-202ENST00000415039 IGLV5-52A0A0A0MRZ9 124 aa13.47□□□□□ -0.25
PSMD3-202ENST00000415039 KRTAP13-1Q8IUC0 172 aa13.46□□□□□ -0.25
PSMD3-202ENST00000415039 PLAC8Q9NZF1 115 aa13.45□□□□□ -0.26
PSMD3-202ENST00000415039 C3orf84H3BNL1 204 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms