RNA–Protein interactions for RNA: ENST00000414672.5

RHBDD3-204, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 900 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-204ENST00000414672 SPINK1P00995 79 aa12.12□□□□□ -0.47
RHBDD3-204ENST00000414672 SFTA2Q6UW10 78 aa12.12□□□□□ -0.47
RHBDD3-204ENST00000414672 C12orf57Q99622 126 aa12.12□□□□□ -0.47
RHBDD3-204ENST00000414672 A0A0U1RRA0 63 aa12.11□□□□□ -0.47
RHBDD3-204ENST00000414672 FSIP2Q5CZC0 6907 aa12.1□□□□□ -0.47
RHBDD3-204ENST00000414672 NDUFA12Q9UI09 145 aa12.1□□□□□ -0.47
RHBDD3-204ENST00000414672 NMUP48645 174 aa12.09□□□□□ -0.47
RHBDD3-204ENST00000414672 LINC00518Q8N0U6 118 aa12.09□□□□□ -0.47
RHBDD3-204ENST00000414672 SMCR5Q8TEV8 140 aa12.09□□□□□ -0.47
RHBDD3-204ENST00000414672 J3QQQ9 107 aa12.08□□□□□ -0.48
RHBDD3-204ENST00000414672 LGALS3P17931 250 aaKnown RBP12.08□□□□□ -0.48
RHBDD3-204ENST00000414672 PRYO14603 147 aa12.07□□□□□ -0.48
RHBDD3-204ENST00000414672 CRCT1Q9UGL9 99 aa12.07□□□□□ -0.48
RHBDD3-204ENST00000414672 ETDCA0A1B0GVM5 59 aa12.06□□□□□ -0.48
RHBDD3-204ENST00000414672 TSPEAR-AS2P59090 65 aa12.06□□□□□ -0.48
RHBDD3-204ENST00000414672 NCR3O14931 201 aa12.04□□□□□ -0.48
RHBDD3-204ENST00000414672 GAGE2AQ6NT46 116 aa12.04□□□□□ -0.48
RHBDD3-204ENST00000414672 BOD1L2Q8IYS8 172 aa12.04□□□□□ -0.48
RHBDD3-204ENST00000414672 IGLV9-49A0A0B4J1Y8 123 aa12.03□□□□□ -0.48
RHBDD3-204ENST00000414672 ZNF815PA8K554 130 aa12.02□□□□□ -0.49
RHBDD3-204ENST00000414672 COX8AP10176 69 aa12.02□□□□□ -0.49
RHBDD3-204ENST00000414672 MOBPQ13875 183 aa12.02□□□□□ -0.49
RHBDD3-204ENST00000414672 PCP2Q8IVA1 136 aa12.02□□□□□ -0.49
RHBDD3-204ENST00000414672 MYMXA0A1B0GTQ4 84 aa12.01□□□□□ -0.49
RHBDD3-204ENST00000414672 SMIM13P0DJ93 91 aa12.01□□□□□ -0.49
RHBDD3-204ENST00000414672 C14orf144Q96I85 54 aa12.01□□□□□ -0.49
RHBDD3-204ENST00000414672 TTTY13Q9BZ97 58 aa12.01□□□□□ -0.49
RHBDD3-204ENST00000414672 KCNQ1DNQ9H478 68 aa12.01□□□□□ -0.49
RHBDD3-204ENST00000414672 SPRR1AP35321 89 aa12□□□□□ -0.49
RHBDD3-204ENST00000414672 LINC00483Q53H64 154 aa12□□□□□ -0.49
RHBDD3-204ENST00000414672 MEIG1Q5JSS6 88 aa11.99□□□□□ -0.49
RHBDD3-204ENST00000414672 SLC25A34Q6PIV7 304 aa11.99□□□□□ -0.49
RHBDD3-204ENST00000414672 Q8N377 158 aa11.99□□□□□ -0.49
RHBDD3-204ENST00000414672 SLC25A20O43772 301 aa11.98□□□□□ -0.49
RHBDD3-204ENST00000414672 HERV-K104P63124 156 aa11.98□□□□□ -0.49
RHBDD3-204ENST00000414672 TRBV10-3A0A0K0K1G6 114 aa11.97□□□□□ -0.49
RHBDD3-204ENST00000414672 KRTAP4-16G5E9R7 235 aaPredicted RBP11.97□□□□□ -0.49
RHBDD3-204ENST00000414672 DLEU1O43261 78 aa11.97□□□□□ -0.49
RHBDD3-204ENST00000414672 SSBP3-AS1Q7Z2R9 100 aa11.97□□□□□ -0.49
RHBDD3-204ENST00000414672 PRO1933Q9H354 126 aa11.97□□□□□ -0.49
RHBDD3-204ENST00000414672 TSTD3H0UI37 97 aa11.96□□□□□ -0.49
RHBDD3-204ENST00000414672 RPS29P62273 56 aaKnown RBP11.96□□□□□ -0.49
RHBDD3-204ENST00000414672 MIR7-3HGQ8N6C7 128 aa11.96□□□□□ -0.49
RHBDD3-204ENST00000414672 UQCR10Q9UDW1 63 aa11.96□□□□□ -0.49
RHBDD3-204ENST00000414672 XP32Q5T750 250 aa11.95□□□□□ -0.5
RHBDD3-204ENST00000414672 SCGB1D4Q6XE38 83 aa11.95□□□□□ -0.5
RHBDD3-204ENST00000414672 A0A0J9YXY3 114 aa11.93□□□□□ -0.5
RHBDD3-204ENST00000414672 ERC2-IT1O76042 136 aa11.93□□□□□ -0.5
RHBDD3-204ENST00000414672 LINC00587B1AMM8 73 aa11.92□□□□□ -0.5
RHBDD3-204ENST00000414672 B5MCH6 92 aa11.92□□□□□ -0.5
RHBDD3-204ENST00000414672 MIEN1Q9BRT3 115 aa11.92□□□□□ -0.5
RHBDD3-204ENST00000414672 TIMM17BO60830 172 aa11.89□□□□□ -0.51
RHBDD3-204ENST00000414672 LCE2CQ5TA81 110 aa11.89□□□□□ -0.51
RHBDD3-204ENST00000414672 C9orf153Q5TBE3 101 aa11.88□□□□□ -0.51
RHBDD3-204ENST00000414672 DDTP30046 118 aa11.87□□□□□ -0.51
RHBDD3-204ENST00000414672 C2orf91Q6ZV80 131 aa11.87□□□□□ -0.51
RHBDD3-204ENST00000414672 HIGD1BQ9P298 99 aa11.87□□□□□ -0.51
RHBDD3-204ENST00000414672 Q9BRP9 147 aa11.86□□□□□ -0.51
RHBDD3-204ENST00000414672 Q6ZRX8 168 aa11.84□□□□□ -0.51
RHBDD3-204ENST00000414672 LITAFQ99732 161 aa11.84□□□□□ -0.51
RHBDD3-204ENST00000414672 SPANXB1Q9NS25 103 aaPredicted RBP11.83□□□□□ -0.52
RHBDD3-204ENST00000414672 ADAMTSL4-AS1Q5T5F5 129 aa11.82□□□□□ -0.52
RHBDD3-204ENST00000414672 Q6ZVH6 145 aa11.82□□□□□ -0.52
RHBDD3-204ENST00000414672 SPANXDQ9BXN6 97 aa11.82□□□□□ -0.52
RHBDD3-204ENST00000414672 SPANXCQ9NY87 97 aa11.82□□□□□ -0.52
RHBDD3-204ENST00000414672 HIST1H4GQ99525 98 aa11.81□□□□□ -0.52
RHBDD3-204ENST00000414672 CFC1BP0CG36 223 aa11.8□□□□□ -0.52
RHBDD3-204ENST00000414672 MT1HP80294 61 aa11.8□□□□□ -0.52
RHBDD3-204ENST00000414672 PCOTHQ58A44 107 aa11.8□□□□□ -0.52
RHBDD3-204ENST00000414672 IGLV8-61A0A075B6I0 122 aa11.79□□□□□ -0.52
RHBDD3-204ENST00000414672 TRBV10-2A0A0K0K1G8 114 aa11.79□□□□□ -0.52
RHBDD3-204ENST00000414672 S100A7L2Q5SY68 101 aa11.79□□□□□ -0.52
RHBDD3-204ENST00000414672 COPS9Q8WXC6 57 aa11.79□□□□□ -0.52
RHBDD3-204ENST00000414672 HSD52Q0P140 79 aa11.78□□□□□ -0.52
RHBDD3-204ENST00000414672 TAL2Q16559 108 aa11.78□□□□□ -0.52
RHBDD3-204ENST00000414672 KRTAP19-2Q3LHN2 52 aa11.78□□□□□ -0.52
RHBDD3-204ENST00000414672 IFITM1P13164 125 aa11.77□□□□□ -0.53
RHBDD3-204ENST00000414672 LOC107984156A0A0G2JMH3 177 aa11.76□□□□□ -0.53
RHBDD3-204ENST00000414672 PCP4L1A6NKN8 68 aa11.76□□□□□ -0.53
RHBDD3-204ENST00000414672 NPC2P61916 151 aa11.76□□□□□ -0.53
RHBDD3-204ENST00000414672 ARL17AQ8IVW1 177 aa11.76□□□□□ -0.53
RHBDD3-204ENST00000414672 LINC00308Q8TCZ7 52 aa11.76□□□□□ -0.53
RHBDD3-204ENST00000414672 C9orf92A6NGG3 77 aa11.75□□□□□ -0.53
RHBDD3-204ENST00000414672 HRCT1Q6UXD1 115 aa11.74□□□□□ -0.53
RHBDD3-204ENST00000414672 MUSTN1Q8IVN3 82 aa11.74□□□□□ -0.53
RHBDD3-204ENST00000414672 ST20-AS1Q8NBB2 130 aa11.74□□□□□ -0.53
RHBDD3-204ENST00000414672 TRAV23DV6A0A075B6W5 121 aa11.73□□□□□ -0.53
RHBDD3-204ENST00000414672 IGLV6-57P01721 117 aa11.73□□□□□ -0.53
RHBDD3-204ENST00000414672 CEND1Q8N111 149 aa11.73□□□□□ -0.53
RHBDD3-204ENST00000414672 SOSTDC1Q6X4U4 206 aa11.72□□□□□ -0.53
RHBDD3-204ENST00000414672 LIMD2Q9BT23 127 aa11.72□□□□□ -0.53
RHBDD3-204ENST00000414672 ZNF73O43830 326 aaPredicted RBP11.7□□□□□ -0.54
RHBDD3-204ENST00000414672 M0R143 59 aa11.69□□□□□ -0.54
RHBDD3-204ENST00000414672 EIF4EBP3O60516 100 aaPredicted RBP11.69□□□□□ -0.54
RHBDD3-204ENST00000414672 TMEM238LA0A1B0GVL6 79 aa11.68□□□□□ -0.54
RHBDD3-204ENST00000414672 A6NJY4 79 aa11.68□□□□□ -0.54
RHBDD3-204ENST00000414672 NDUFC2O95298 119 aa11.68□□□□□ -0.54
RHBDD3-204ENST00000414672 HINT1P49773 126 aaPredicted RBP11.67□□□□□ -0.54
RHBDD3-204ENST00000414672 A4D1N5 150 aa11.66□□□□□ -0.54
RHBDD3-204ENST00000414672 M0R2T5 61 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms