RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 S100A12P80511 92 aa9.33□□□□□ -0.92
MRPL55-220ENST00000411464 MOBPQ13875 183 aa9.33□□□□□ -0.92
MRPL55-220ENST00000411464 IGLV9-49A0A0B4J1Y8 123 aa9.32□□□□□ -0.92
MRPL55-220ENST00000411464 KRTAP4-16G5E9R7 235 aaPredicted RBP9.32□□□□□ -0.92
MRPL55-220ENST00000411464 RPS29P62273 56 aaKnown RBP9.32□□□□□ -0.92
MRPL55-220ENST00000411464 MEIG1Q5JSS6 88 aa9.32□□□□□ -0.92
MRPL55-220ENST00000411464 SSBP3-AS1Q7Z2R9 100 aa9.32□□□□□ -0.92
MRPL55-220ENST00000411464 ATOH7Q8N100 152 aa9.32□□□□□ -0.92
MRPL55-220ENST00000411464 Q8N377 158 aa9.32□□□□□ -0.92
MRPL55-220ENST00000411464 CRCT1Q9UGL9 99 aa9.32□□□□□ -0.92
MRPL55-220ENST00000411464 SLC25A20O43772 301 aa9.31□□□□□ -0.92
MRPL55-220ENST00000411464 HERVK_113P61574 105 aa9.31□□□□□ -0.92
MRPL55-220ENST00000411464 MIR7-3HGQ8N6C7 128 aa9.31□□□□□ -0.92
MRPL55-220ENST00000411464 TRBV10-3A0A0K0K1G6 114 aa9.3□□□□□ -0.92
MRPL55-220ENST00000411464 SCGB1D1O95968 90 aa9.3□□□□□ -0.92
MRPL55-220ENST00000411464 FSIP2Q5CZC0 6907 aa9.3□□□□□ -0.92
MRPL55-220ENST00000411464 LINC00587B1AMM8 73 aa9.29□□□□□ -0.92
MRPL55-220ENST00000411464 AKR1D1P51857 326 aa9.29□□□□□ -0.92
MRPL55-220ENST00000411464 HERV-K104P63124 156 aa9.29□□□□□ -0.92
MRPL55-220ENST00000411464 B5MCH6 92 aa9.28□□□□□ -0.92
MRPL55-220ENST00000411464 LEPROTO15243 131 aa9.28□□□□□ -0.92
MRPL55-220ENST00000411464 XP32Q5T750 250 aa9.28□□□□□ -0.92
MRPL55-220ENST00000411464 ERC2-IT1O76042 136 aa9.27□□□□□ -0.93
MRPL55-220ENST00000411464 TSPEAR-AS2P59090 65 aa9.27□□□□□ -0.93
MRPL55-220ENST00000411464 E9PLD3 99 aa9.26□□□□□ -0.93
MRPL55-220ENST00000411464 J3QQQ9 107 aa9.25□□□□□ -0.93
MRPL55-220ENST00000411464 JOSD1Q15040 202 aaPredicted RBP9.25□□□□□ -0.93
MRPL55-220ENST00000411464 ANKRD39Q53RE8 183 aa9.25□□□□□ -0.93
MRPL55-220ENST00000411464 MYMXA0A1B0GTQ4 84 aa9.23□□□□□ -0.93
MRPL55-220ENST00000411464 LGALS3P17931 250 aaKnown RBP9.23□□□□□ -0.93
MRPL55-220ENST00000411464 DDTP30046 118 aa9.23□□□□□ -0.93
MRPL55-220ENST00000411464 PYY3Q5JQD4 70 aa9.22□□□□□ -0.93
MRPL55-220ENST00000411464 Q6ZRX8 168 aa9.22□□□□□ -0.93
MRPL55-220ENST00000411464 Q9BRP9 147 aa9.22□□□□□ -0.93
MRPL55-220ENST00000411464 HSBP1L1C9JCN9 74 aa9.21□□□□□ -0.94
MRPL55-220ENST00000411464 LCE2CQ5TA81 110 aa9.21□□□□□ -0.94
MRPL55-220ENST00000411464 C9orf153Q5TBE3 101 aa9.21□□□□□ -0.94
MRPL55-220ENST00000411464 TRBV10-2A0A0K0K1G8 114 aa9.2□□□□□ -0.94
MRPL55-220ENST00000411464 NMUP48645 174 aa9.2□□□□□ -0.94
MRPL55-220ENST00000411464 TTTY13Q9BZ97 58 aa9.2□□□□□ -0.94
MRPL55-220ENST00000411464 LOC105371267A0A1B0GV96 52 aa9.19□□□□□ -0.94
MRPL55-220ENST00000411464 LOC107984156A0A0G2JMH3 177 aa9.18□□□□□ -0.94
MRPL55-220ENST00000411464 S100A7L2Q5SY68 101 aa9.18□□□□□ -0.94
MRPL55-220ENST00000411464 ARL17AQ8IVW1 177 aa9.18□□□□□ -0.94
MRPL55-220ENST00000411464 ZNF815PA8K554 130 aa9.17□□□□□ -0.94
MRPL55-220ENST00000411464 MIEN1Q9BRT3 115 aa9.17□□□□□ -0.94
MRPL55-220ENST00000411464 VAMP8Q9BV40 100 aa9.17□□□□□ -0.94
MRPL55-220ENST00000411464 SPANXB1Q9NS25 103 aaPredicted RBP9.17□□□□□ -0.94
MRPL55-220ENST00000411464 PCP2Q8IVA1 136 aa9.16□□□□□ -0.94
MRPL55-220ENST00000411464 PAM16Q9Y3D7 125 aa9.16□□□□□ -0.94
MRPL55-220ENST00000411464 CFC1BP0CG36 223 aa9.15□□□□□ -0.94
MRPL55-220ENST00000411464 MT1HP80294 61 aa9.15□□□□□ -0.94
MRPL55-220ENST00000411464 SPATA45Q537H7 98 aa9.15□□□□□ -0.94
MRPL55-220ENST00000411464 PCOTHQ58A44 107 aa9.15□□□□□ -0.94
MRPL55-220ENST00000411464 IGLV8-61A0A075B6I0 122 aa9.14□□□□□ -0.95
MRPL55-220ENST00000411464 A0A0J9YXY3 114 aa9.14□□□□□ -0.95
MRPL55-220ENST00000411464 TRAV23DV6A0A075B6W5 121 aa9.13□□□□□ -0.95
MRPL55-220ENST00000411464 IGLV6-57P01721 117 aa9.13□□□□□ -0.95
MRPL55-220ENST00000411464 KRTAP19-2Q3LHN2 52 aa9.13□□□□□ -0.95
MRPL55-220ENST00000411464 NDUFC2O95298 119 aa9.12□□□□□ -0.95
MRPL55-220ENST00000411464 ST20-AS1Q8NBB2 130 aa9.12□□□□□ -0.95
MRPL55-220ENST00000411464 LIMD2Q9BT23 127 aa9.12□□□□□ -0.95
MRPL55-220ENST00000411464 ZNF73O43830 326 aaPredicted RBP9.11□□□□□ -0.95
MRPL55-220ENST00000411464 COX8AP10176 69 aa9.1□□□□□ -0.95
MRPL55-220ENST00000411464 HINT1P49773 126 aaPredicted RBP9.1□□□□□ -0.95
MRPL55-220ENST00000411464 C9orf92A6NGG3 77 aa9.09□□□□□ -0.95
MRPL55-220ENST00000411464 SMIM6P0DI80 62 aa9.09□□□□□ -0.95
MRPL55-220ENST00000411464 HRCT1Q6UXD1 115 aa9.09□□□□□ -0.95
MRPL55-220ENST00000411464 SCGB1D4Q6XE38 83 aa9.09□□□□□ -0.95
MRPL55-220ENST00000411464 C14orf144Q96I85 54 aa9.09□□□□□ -0.95
MRPL55-220ENST00000411464 TIMM17BO60830 172 aa9.08□□□□□ -0.96
MRPL55-220ENST00000411464 ADAMTSL4-AS1Q5T5F5 129 aa9.08□□□□□ -0.96
MRPL55-220ENST00000411464 SLC25A34Q6PIV7 304 aa9.08□□□□□ -0.96
MRPL55-220ENST00000411464 LITAFQ99732 161 aa9.08□□□□□ -0.96
MRPL55-220ENST00000411464 LCE2BO14633 110 aa9.07□□□□□ -0.96
MRPL55-220ENST00000411464 CBY1Q9Y3M2 126 aa9.07□□□□□ -0.96
MRPL55-220ENST00000411464 DLEU1O43261 78 aa9.05□□□□□ -0.96
MRPL55-220ENST00000411464 NPC2P61916 151 aa9.05□□□□□ -0.96
MRPL55-220ENST00000411464 SPRR1BP22528 89 aa9.04□□□□□ -0.96
MRPL55-220ENST00000411464 LAMTOR3Q9UHA4 124 aa9.04□□□□□ -0.96
MRPL55-220ENST00000411464 LORP23490 312 aaPredicted RBP9.03□□□□□ -0.96
MRPL55-220ENST00000411464 SOSTDC1Q6X4U4 206 aa9.03□□□□□ -0.96
MRPL55-220ENST00000411464 SPANXDQ9BXN6 97 aa9.03□□□□□ -0.96
MRPL55-220ENST00000411464 SPANXCQ9NY87 97 aa9.03□□□□□ -0.96
MRPL55-220ENST00000411464 EIF4EBP3O60516 100 aaPredicted RBP9.02□□□□□ -0.97
MRPL55-220ENST00000411464 KRTAP10-6P60371 365 aaPredicted RBP9.02□□□□□ -0.97
MRPL55-220ENST00000411464 LINC00308Q8TCZ7 52 aa9.02□□□□□ -0.97
MRPL55-220ENST00000411464 DHRS4-AS1Q9P1J3 65 aa9.02□□□□□ -0.97
MRPL55-220ENST00000411464 M0R2T5 61 aa9.01□□□□□ -0.97
MRPL55-220ENST00000411464 C2orf91Q6ZV80 131 aa9□□□□□ -0.97
MRPL55-220ENST00000411464 OR13C6PQ8NH95 151 aa9□□□□□ -0.97
MRPL55-220ENST00000411464 C12orf57Q99622 126 aa9□□□□□ -0.97
MRPL55-220ENST00000411464 PRO1933Q9H354 126 aa8.99□□□□□ -0.97
MRPL55-220ENST00000411464 CD164Q04900 197 aa8.98□□□□□ -0.97
MRPL55-220ENST00000411464 Q6ZVH6 145 aa8.98□□□□□ -0.97
MRPL55-220ENST00000411464 MUSTN1Q8IVN3 82 aa8.98□□□□□ -0.97
MRPL55-220ENST00000411464 HIGD1BQ9P298 99 aa8.98□□□□□ -0.97
MRPL55-220ENST00000411464 UQCR10Q9UDW1 63 aa8.98□□□□□ -0.97
MRPL55-220ENST00000411464 IFITM1P13164 125 aa8.97□□□□□ -0.97
MRPL55-220ENST00000411464 TAL2Q16559 108 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms