RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 LINC01547P58512 204 aaPredicted RBP10.39□□□□□ -0.75
HOXD3-202ENST00000410016 SEC61GP60059 68 aa10.39□□□□□ -0.75
HOXD3-202ENST00000410016 GHRHP01286 108 aa10.39□□□□□ -0.75
HOXD3-202ENST00000410016 MAST4O15021 2626 aa10.38□□□□□ -0.75
HOXD3-202ENST00000410016 FLNBO75369 2602 aaKnown RBP10.38□□□□□ -0.75
HOXD3-202ENST00000410016 OXTP01178 125 aa10.36□□□□□ -0.75
HOXD3-202ENST00000410016 SERTAD4-AS1Q5TG53 156 aa10.36□□□□□ -0.75
HOXD3-202ENST00000410016 KCNQ1DNQ9H478 68 aa10.36□□□□□ -0.75
HOXD3-202ENST00000410016 NOTCH1P46531 2555 aa10.35□□□□□ -0.75
HOXD3-202ENST00000410016 HAMPP81172 84 aa10.35□□□□□ -0.75
HOXD3-202ENST00000410016 DNAH1Q9P2D7 4330 aa10.34□□□□□ -0.75
HOXD3-202ENST00000410016 LINC00588Q9Y4M8 146 aa10.33□□□□□ -0.76
HOXD3-202ENST00000410016 TLX1NBP0CAT3 122 aa10.33□□□□□ -0.76
HOXD3-202ENST00000410016 CXCL6P80162 114 aa10.33□□□□□ -0.76
HOXD3-202ENST00000410016 C7orf33Q8WU49 177 aa10.33□□□□□ -0.76
HOXD3-202ENST00000410016 V9GYY9 64 aa10.32□□□□□ -0.76
HOXD3-202ENST00000410016 EPM2AB3EWF7 344 aa10.31□□□□□ -0.76
HOXD3-202ENST00000410016 CASC10Q5T4H9 136 aa10.31□□□□□ -0.76
HOXD3-202ENST00000410016 NKAPP1Q8N9T2 125 aa10.31□□□□□ -0.76
HOXD3-202ENST00000410016 TRAV10A0A0B4J240 114 aa10.3□□□□□ -0.76
HOXD3-202ENST00000410016 PLA2G2DQ9UNK4 145 aa10.3□□□□□ -0.76
HOXD3-202ENST00000410016 HUWE1Q7Z6Z7 4374 aaKnown RBP10.28□□□□□ -0.76
HOXD3-202ENST00000410016 BCE1O60756 84 aa10.28□□□□□ -0.76
HOXD3-202ENST00000410016 NBEAL1Q6ZS30 2694 aa10.27□□□□□ -0.77
HOXD3-202ENST00000410016 FAM168BA1KXE4 195 aa10.27□□□□□ -0.77
HOXD3-202ENST00000410016 KRTAP4-16G5E9R7 235 aaPredicted RBP10.27□□□□□ -0.77
HOXD3-202ENST00000410016 PRB2P02812 416 aaPredicted RBP10.27□□□□□ -0.77
HOXD3-202ENST00000410016 KRTAP7-1Q8IUC3 87 aa10.27□□□□□ -0.77
HOXD3-202ENST00000410016 Q8N377 158 aa10.27□□□□□ -0.77
HOXD3-202ENST00000410016 TM2D3Q9BRN9 247 aa10.27□□□□□ -0.77
HOXD3-202ENST00000410016 LINC00336Q6ZUF6 198 aa10.26□□□□□ -0.77
HOXD3-202ENST00000410016 IGLV5-37A0A075B6J1 123 aa10.25□□□□□ -0.77
HOXD3-202ENST00000410016 IGLV1-50A0A075B6I6 118 aa10.24□□□□□ -0.77
HOXD3-202ENST00000410016 RPL37AP8A6NKH3 93 aa10.24□□□□□ -0.77
HOXD3-202ENST00000410016 SCXQ7RTU7 201 aa10.24□□□□□ -0.77
HOXD3-202ENST00000410016 SPRR1AP35321 89 aa10.24□□□□□ -0.77
HOXD3-202ENST00000410016 Q6ZRX8 168 aa10.24□□□□□ -0.77
HOXD3-202ENST00000410016 Q9BRP9 147 aa10.24□□□□□ -0.77
HOXD3-202ENST00000410016 DEFB105AQ8NG35 78 aa10.23□□□□□ -0.77
HOXD3-202ENST00000410016 COL6A5A8TX70 2615 aa10.23□□□□□ -0.77
HOXD3-202ENST00000410016 IGLV5-48A0A075B6I7 105 aa10.23□□□□□ -0.77
HOXD3-202ENST00000410016 TRAV7A0A075B6U4 112 aa10.23□□□□□ -0.77
HOXD3-202ENST00000410016 SERP1Q9Y6X1 66 aa10.23□□□□□ -0.77
HOXD3-202ENST00000410016 BAHCC1Q9P281 2608 aa10.22□□□□□ -0.77
HOXD3-202ENST00000410016 DHRS4-AS1Q9P1J3 65 aa10.22□□□□□ -0.77
HOXD3-202ENST00000410016 C20orf197Q8N268 126 aa10.21□□□□□ -0.77
HOXD3-202ENST00000410016 K7EIL1 84 aa10.21□□□□□ -0.78
HOXD3-202ENST00000410016 PRYO14603 147 aa10.21□□□□□ -0.78
HOXD3-202ENST00000410016 RMI2Q96E14 147 aa10.19□□□□□ -0.78
HOXD3-202ENST00000410016 C1orf195Q5TG92 126 aa10.18□□□□□ -0.78
HOXD3-202ENST00000410016 TNP2Q05952 138 aa10.17□□□□□ -0.78
HOXD3-202ENST00000410016 MRPL55Q7Z7F7 128 aaKnown RBP10.17□□□□□ -0.78
HOXD3-202ENST00000410016 ETDCA0A1B0GVM5 59 aa10.16□□□□□ -0.78
HOXD3-202ENST00000410016 NREPQ16612 68 aa10.16□□□□□ -0.78
HOXD3-202ENST00000410016 ST20-AS1Q8NBB2 130 aa10.16□□□□□ -0.78
HOXD3-202ENST00000410016 PKIGQ9Y2B9 76 aa10.16□□□□□ -0.78
HOXD3-202ENST00000410016 SMIM26A0A096LP01 95 aa10.16□□□□□ -0.78
HOXD3-202ENST00000410016 C3orf84H3BNL1 204 aa10.16□□□□□ -0.78
HOXD3-202ENST00000410016 Q8N9L7 120 aa10.15□□□□□ -0.79
HOXD3-202ENST00000410016 FAM236DA0A1B0GTK5 79 aa10.14□□□□□ -0.79
HOXD3-202ENST00000410016 ERC2-IT1O76042 136 aa10.14□□□□□ -0.79
HOXD3-202ENST00000410016 FAM236CP0DP71 79 aa10.14□□□□□ -0.79
HOXD3-202ENST00000410016 KLKP1Q107X0 134 aa10.14□□□□□ -0.79
HOXD3-202ENST00000410016 LYSTQ99698 3801 aa10.14□□□□□ -0.79
HOXD3-202ENST00000410016 A0A1W2PNM2 257 aa10.14□□□□□ -0.79
HOXD3-202ENST00000410016 IGKV4-1P06312 121 aa10.14□□□□□ -0.79
HOXD3-202ENST00000410016 DNAH10Q8IVF4 4471 aa10.13□□□□□ -0.79
HOXD3-202ENST00000410016 H7BZZ5 65 aa10.13□□□□□ -0.79
HOXD3-202ENST00000410016 KRTAP1-5Q9BYS1 174 aa10.11□□□□□ -0.79
HOXD3-202ENST00000410016 A0A1B0GW54 56 aa10.11□□□□□ -0.79
HOXD3-202ENST00000410016 BPY2O14599 106 aa10.1□□□□□ -0.79
HOXD3-202ENST00000410016 C1orf137Q5JT78 98 aa10.1□□□□□ -0.79
HOXD3-202ENST00000410016 MGAM2Q2M2H8 2515 aa10.1□□□□□ -0.79
HOXD3-202ENST00000410016 FUSP35637 526 aaKnown RBP eCLIP10.09□□□□□ -0.79
HOXD3-202ENST00000410016 SNURFQ9Y675 71 aa10.09□□□□□ -0.79
HOXD3-202ENST00000410016 DNAH9Q9NYC9 4486 aa10.09□□□□□ -0.79
HOXD3-202ENST00000410016 REG3GQ6UW15 175 aa10.08□□□□□ -0.8
HOXD3-202ENST00000410016 STAB2Q8WWQ8 2551 aa10.07□□□□□ -0.8
HOXD3-202ENST00000410016 COL7A1Q02388 2944 aa10.07□□□□□ -0.8
HOXD3-202ENST00000410016 UBE2BP63146 152 aa10.07□□□□□ -0.8
HOXD3-202ENST00000410016 Q8NBF4 154 aa10.07□□□□□ -0.8
HOXD3-202ENST00000410016 SPRR4Q96PI1 79 aa10.07□□□□□ -0.8
HOXD3-202ENST00000410016 SMIM29Q86T20 159 aa10.07□□□□□ -0.8
HOXD3-202ENST00000410016 A0A096LNI7 61 aa10.06□□□□□ -0.8
HOXD3-202ENST00000410016 CNBPP62633 177 aaKnown RBP10.06□□□□□ -0.8
HOXD3-202ENST00000410016 C16orf90A8MZG2 172 aa10.05□□□□□ -0.8
HOXD3-202ENST00000410016 A0A1W2PNN7 141 aa10.04□□□□□ -0.8
HOXD3-202ENST00000410016 OCR1Q9BZK8 76 aa10.04□□□□□ -0.8
HOXD3-202ENST00000410016 ATP5EP56381 51 aaPredicted RBP10.02□□□□□ -0.8
HOXD3-202ENST00000410016 FP248Q71RG6 208 aaPredicted RBP10.02□□□□□ -0.8
HOXD3-202ENST00000410016 IGKV2-24A0A0C4DH68 120 aa10.02□□□□□ -0.81
HOXD3-202ENST00000410016 F8WEM9 126 aa10□□□□□ -0.81
HOXD3-202ENST00000410016 TMEM254Q8TBM7 123 aa10□□□□□ -0.81
HOXD3-202ENST00000410016 APLNQ9ULZ1 77 aa10□□□□□ -0.81
HOXD3-202ENST00000410016 PRLHP81277 87 aa9.99□□□□□ -0.81
HOXD3-202ENST00000410016 LINC00476Q8WZB0 136 aa9.99□□□□□ -0.81
HOXD3-202ENST00000410016 PSCAO43653 123 aa9.98□□□□□ -0.81
HOXD3-202ENST00000410016 NDUFC1O43677 76 aa9.98□□□□□ -0.81
HOXD3-202ENST00000410016 DSCR10P59022 87 aa9.98□□□□□ -0.81
HOXD3-202ENST00000410016 DYNC2H1Q8NCM8 4307 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 1731.9 ms