RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 Q6ZRP5 223 aa4.9□□□□□ -1.63
CXCR4-202ENST00000409817 UBE2DNLQ8IWF7 75 aa4.9□□□□□ -1.63
CXCR4-202ENST00000409817 hADV29S1A0JD25 119 aa4.89□□□□□ -1.63
CXCR4-202ENST00000409817 ZNF73O43830 326 aaPredicted RBP4.89□□□□□ -1.63
CXCR4-202ENST00000409817 GAGE2EQ4V326 116 aa4.89□□□□□ -1.63
CXCR4-202ENST00000409817 GAGE2DQ9UEU5 116 aa4.89□□□□□ -1.63
CXCR4-202ENST00000409817 XGP55808 180 aa4.88□□□□□ -1.63
CXCR4-202ENST00000409817 TTC32Q5I0X7 151 aa4.88□□□□□ -1.63
CXCR4-202ENST00000409817 IGLV5-37A0A075B6J1 123 aa4.88□□□□□ -1.63
CXCR4-202ENST00000409817 ELOF1P60002 83 aaKnown RBP4.88□□□□□ -1.63
CXCR4-202ENST00000409817 C14orf177Q52M58 125 aa4.88□□□□□ -1.63
CXCR4-202ENST00000409817 C9orf129Q5T035 196 aaKnown RBP4.88□□□□□ -1.63
CXCR4-202ENST00000409817 NKAPP1Q8N9T2 125 aa4.88□□□□□ -1.63
CXCR4-202ENST00000409817 LOC107984640A0A0U1RRK4 108 aa4.87□□□□□ -1.63
CXCR4-202ENST00000409817 COX7BP24311 80 aa4.87□□□□□ -1.63
CXCR4-202ENST00000409817 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.87□□□□□ -1.63
CXCR4-202ENST00000409817 MT-ATP8P03928 68 aa4.86□□□□□ -1.63
CXCR4-202ENST00000409817 SLPIP03973 132 aa4.86□□□□□ -1.63
CXCR4-202ENST00000409817 Q6Q795 121 aa4.86□□□□□ -1.63
CXCR4-202ENST00000409817 KCNQ1DNQ9H478 68 aa4.86□□□□□ -1.63
CXCR4-202ENST00000409817 PKIGQ9Y2B9 76 aa4.86□□□□□ -1.63
CXCR4-202ENST00000409817 PSCAO43653 123 aa4.86□□□□□ -1.63
CXCR4-202ENST00000409817 CNBPP62633 177 aaKnown RBP4.86□□□□□ -1.63
CXCR4-202ENST00000409817 CASC10Q5T4H9 136 aa4.86□□□□□ -1.63
CXCR4-202ENST00000409817 SDIM1Q6ZPB5 146 aa4.86□□□□□ -1.63
CXCR4-202ENST00000409817 PDE6GP18545 87 aa4.84□□□□□ -1.63
CXCR4-202ENST00000409817 GAGE2AQ6NT46 116 aa4.84□□□□□ -1.63
CXCR4-202ENST00000409817 LINC00643Q86TS7 51 aa4.84□□□□□ -1.63
CXCR4-202ENST00000409817 KRTAP1-5Q9BYS1 174 aa4.84□□□□□ -1.63
CXCR4-202ENST00000409817 C14orf132Q9NPU4 83 aa4.84□□□□□ -1.63
CXCR4-202ENST00000409817 DNAH9Q9NYC9 4486 aa4.84□□□□□ -1.63
CXCR4-202ENST00000409817 STAB2Q8WWQ8 2551 aa4.84□□□□□ -1.64
CXCR4-202ENST00000409817 GAGE2BQ13066 116 aa4.83□□□□□ -1.64
CXCR4-202ENST00000409817 Q6ZQY7 126 aa4.83□□□□□ -1.64
CXCR4-202ENST00000409817 C7orf33Q8WU49 177 aa4.83□□□□□ -1.64
CXCR4-202ENST00000409817 IMUPQ9GZP8 106 aa4.83□□□□□ -1.64
CXCR4-202ENST00000409817 NBDYA0A0U1RRE5 68 aa4.83□□□□□ -1.64
CXCR4-202ENST00000409817 CCKP06307 115 aa4.83□□□□□ -1.64
CXCR4-202ENST00000409817 KRTAP21-3Q3LHN1 58 aa4.83□□□□□ -1.64
CXCR4-202ENST00000409817 TRBV7-7A0A0K0K1E9 115 aa4.82□□□□□ -1.64
CXCR4-202ENST00000409817 C16orf90A8MZG2 172 aa4.82□□□□□ -1.64
CXCR4-202ENST00000409817 RBM3P98179 157 aaKnown RBP4.82□□□□□ -1.64
CXCR4-202ENST00000409817 IGLV1-50A0A075B6I6 118 aa4.81□□□□□ -1.64
CXCR4-202ENST00000409817 LOC110117498A0A087WWA1 95 aa4.81□□□□□ -1.64
CXCR4-202ENST00000409817 SPRR1AP35321 89 aa4.81□□□□□ -1.64
CXCR4-202ENST00000409817 KRTAP15-1Q3LI76 137 aa4.81□□□□□ -1.64
CXCR4-202ENST00000409817 DHRS4-AS1Q9P1J3 65 aa4.81□□□□□ -1.64
CXCR4-202ENST00000409817 MRPL55Q7Z7F7 128 aaKnown RBP4.81□□□□□ -1.64
CXCR4-202ENST00000409817 LAMTOR3Q9UHA4 124 aa4.81□□□□□ -1.64
CXCR4-202ENST00000409817 DSCR8Q96T75 97 aa4.8□□□□□ -1.64
CXCR4-202ENST00000409817 DNAH1Q9P2D7 4330 aa4.8□□□□□ -1.64
CXCR4-202ENST00000409817 KRTAP4-16G5E9R7 235 aaPredicted RBP4.79□□□□□ -1.64
CXCR4-202ENST00000409817 Q6ZRX8 168 aa4.79□□□□□ -1.64
CXCR4-202ENST00000409817 A0A1B0GV72 72 aa4.79□□□□□ -1.64
CXCR4-202ENST00000409817 ETDCA0A1B0GVM5 59 aa4.79□□□□□ -1.64
CXCR4-202ENST00000409817 SMCR5Q8TEV8 140 aa4.79□□□□□ -1.64
CXCR4-202ENST00000409817 LINC00474Q9P2X8 69 aa4.79□□□□□ -1.64
CXCR4-202ENST00000409817 DYNC2H1Q8NCM8 4307 aaKnown RBP4.78□□□□□ -1.64
CXCR4-202ENST00000409817 FAM168BA1KXE4 195 aa4.78□□□□□ -1.64
CXCR4-202ENST00000409817 LRCOL1A6NCL2 159 aa4.78□□□□□ -1.64
CXCR4-202ENST00000409817 ATP5EP2Q5VTU8 51 aa4.78□□□□□ -1.64
CXCR4-202ENST00000409817 Q6JHZ5 121 aa4.78□□□□□ -1.64
CXCR4-202ENST00000409817 Q6ZQT0 140 aa4.78□□□□□ -1.64
CXCR4-202ENST00000409817 FAM19A5Q7Z5A7 132 aaPredicted RBP4.78□□□□□ -1.64
CXCR4-202ENST00000409817 KRTAP7-1Q8IUC3 87 aa4.78□□□□□ -1.64
CXCR4-202ENST00000409817 C9orf163Q8N9P6 203 aa4.78□□□□□ -1.64
CXCR4-202ENST00000409817 A0A096LNI7 61 aa4.77□□□□□ -1.65
CXCR4-202ENST00000409817 NDUFV3P56181 108 aaKnown RBP4.77□□□□□ -1.65
CXCR4-202ENST00000409817 Q6ZRN7 208 aaPredicted RBP4.77□□□□□ -1.65
CXCR4-202ENST00000409817 LINC00846Q9NV44 126 aa4.77□□□□□ -1.65
CXCR4-202ENST00000409817 TRBV7-4A0A0J9YYF1 115 aa4.77□□□□□ -1.65
CXCR4-202ENST00000409817 RPL37AP8A6NKH3 93 aa4.77□□□□□ -1.65
CXCR4-202ENST00000409817 REG3GQ6UW15 175 aa4.77□□□□□ -1.65
CXCR4-202ENST00000409817 KRTAP9-3Q9BYQ3 159 aa4.77□□□□□ -1.65
CXCR4-202ENST00000409817 UBL5Q9BZL1 73 aa4.77□□□□□ -1.65
CXCR4-202ENST00000409817 COL7A1Q02388 2944 aa4.75□□□□□ -1.65
CXCR4-202ENST00000409817 IGLV5-48A0A075B6I7 105 aa4.75□□□□□ -1.65
CXCR4-202ENST00000409817 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.75□□□□□ -1.65
CXCR4-202ENST00000409817 IGKV2-24A0A0C4DH68 120 aa4.75□□□□□ -1.65
CXCR4-202ENST00000409817 A0A1B0GW54 56 aa4.74□□□□□ -1.65
CXCR4-202ENST00000409817 Q6ZR54 194 aa4.74□□□□□ -1.65
CXCR4-202ENST00000409817 Q9BRP9 147 aa4.74□□□□□ -1.65
CXCR4-202ENST00000409817 ANAPC13Q9BS18 74 aa4.74□□□□□ -1.65
CXCR4-202ENST00000409817 A0A1W2PNN7 141 aa4.73□□□□□ -1.65
CXCR4-202ENST00000409817 Q8N377 158 aa4.73□□□□□ -1.65
CXCR4-202ENST00000409817 H0Y9J4 135 aa4.73□□□□□ -1.65
CXCR4-202ENST00000409817 LINC01547P58512 204 aaPredicted RBP4.73□□□□□ -1.65
CXCR4-202ENST00000409817 MPLKIPQ8TAP9 179 aa4.73□□□□□ -1.65
CXCR4-202ENST00000409817 A0A087WTM6 91 aa4.72□□□□□ -1.65
CXCR4-202ENST00000409817 UBE2BP63146 152 aa4.72□□□□□ -1.65
CXCR4-202ENST00000409817 FAM236AA0A1B0GUQ0 79 aa4.71□□□□□ -1.66
CXCR4-202ENST00000409817 FAM236BA0A1B0GV22 79 aa4.71□□□□□ -1.66
CXCR4-202ENST00000409817 EPM2AB3EWF7 344 aa4.71□□□□□ -1.66
CXCR4-202ENST00000409817 FAM19A1Q7Z5A9 133 aa4.71□□□□□ -1.66
CXCR4-202ENST00000409817 IGKV3D-7A0A0C4DH55 119 aa4.7□□□□□ -1.66
CXCR4-202ENST00000409817 M0R2N4 97 aa4.7□□□□□ -1.66
CXCR4-202ENST00000409817 HIST1H4AP62805 103 aaKnown RBP4.7□□□□□ -1.66
CXCR4-202ENST00000409817 CXCL6P80162 114 aa4.7□□□□□ -1.66
CXCR4-202ENST00000409817 DEFB105AQ8NG35 78 aa4.7□□□□□ -1.66
CXCR4-202ENST00000409817 C1orf134Q5TEV5 83 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms