RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 DIRC1Q969H9 104 aa7.89□□□□□ -1.15
CHMP3-204ENST00000409727 C9JAW5 83 aa7.88□□□□□ -1.15
CHMP3-204ENST00000409727 IGLV1-50A0A075B6I6 118 aa7.87□□□□□ -1.15
CHMP3-204ENST00000409727 H0YGX0 51 aa7.87□□□□□ -1.15
CHMP3-204ENST00000409727 PHF5AQ7RTV0 110 aaKnown RBP7.87□□□□□ -1.15
CHMP3-204ENST00000409727 SPACA4Q8TDM5 124 aa7.87□□□□□ -1.15
CHMP3-204ENST00000409727 KCNQ1DNQ9H478 68 aa7.86□□□□□ -1.15
CHMP3-204ENST00000409727 FRAS1Q86XX4 4008 aa7.85□□□□□ -1.15
CHMP3-204ENST00000409727 COX7BP24311 80 aa7.85□□□□□ -1.15
CHMP3-204ENST00000409727 UBE2BP63146 152 aa7.85□□□□□ -1.15
CHMP3-204ENST00000409727 PRO0461Q9UI25 63 aa7.85□□□□□ -1.15
CHMP3-204ENST00000409727 CBY1Q9Y3M2 126 aa7.85□□□□□ -1.15
CHMP3-204ENST00000409727 DNAH17Q9UFH2 4485 aa7.84□□□□□ -1.15
CHMP3-204ENST00000409727 F8W1H4 67 aa7.83□□□□□ -1.16
CHMP3-204ENST00000409727 SLC25A20O43772 301 aa7.83□□□□□ -1.16
CHMP3-204ENST00000409727 DNAL4O96015 105 aa7.83□□□□□ -1.16
CHMP3-204ENST00000409727 PRYO14603 147 aa7.83□□□□□ -1.16
CHMP3-204ENST00000409727 TRACP01848 142 aa7.83□□□□□ -1.16
CHMP3-204ENST00000409727 LINC00575Q6W349 94 aa7.83□□□□□ -1.16
CHMP3-204ENST00000409727 ELOF1P60002 83 aaKnown RBP7.82□□□□□ -1.16
CHMP3-204ENST00000409727 KRTAP11-1Q8IUC1 163 aa7.82□□□□□ -1.16
CHMP3-204ENST00000409727 SACSQ9NZJ4 4579 aa7.82□□□□□ -1.16
CHMP3-204ENST00000409727 HECTD4Q9Y4D8 3996 aa7.82□□□□□ -1.16
CHMP3-204ENST00000409727 REG3GQ6UW15 175 aa7.81□□□□□ -1.16
CHMP3-204ENST00000409727 ETDCA0A1B0GVM5 59 aa7.81□□□□□ -1.16
CHMP3-204ENST00000409727 FAM30AQ9NZY2 134 aa7.81□□□□□ -1.16
CHMP3-204ENST00000409727 hADV29S1A0JD25 119 aa7.8□□□□□ -1.16
CHMP3-204ENST00000409727 KRTAP10-1P60331 282 aa7.8□□□□□ -1.16
CHMP3-204ENST00000409727 LINC00336Q6ZUF6 198 aa7.8□□□□□ -1.16
CHMP3-204ENST00000409727 TRBV7-6A0A0J9YX20 115 aa7.79□□□□□ -1.16
CHMP3-204ENST00000409727 HAMPP81172 84 aa7.79□□□□□ -1.16
CHMP3-204ENST00000409727 ANKRD29Q8N6D5 301 aa7.79□□□□□ -1.16
CHMP3-204ENST00000409727 SNCGO76070 127 aa7.79□□□□□ -1.16
CHMP3-204ENST00000409727 BAALC-AS2P0C853 105 aa7.79□□□□□ -1.16
CHMP3-204ENST00000409727 SPRR1AP35321 89 aa7.79□□□□□ -1.16
CHMP3-204ENST00000409727 ETDBQ3ZM63 59 aa7.79□□□□□ -1.16
CHMP3-204ENST00000409727 B5MCH6 92 aa7.78□□□□□ -1.16
CHMP3-204ENST00000409727 KRTAP4-16G5E9R7 235 aaPredicted RBP7.78□□□□□ -1.16
CHMP3-204ENST00000409727 PLAC8Q9NZF1 115 aa7.78□□□□□ -1.16
CHMP3-204ENST00000409727 KMT2CQ8NEZ4 4911 aaKnown RBP7.78□□□□□ -1.16
CHMP3-204ENST00000409727 Q6ZRX8 168 aa7.77□□□□□ -1.17
CHMP3-204ENST00000409727 FAM19A1Q7Z5A9 133 aa7.77□□□□□ -1.17
CHMP3-204ENST00000409727 FAT2Q9NYQ8 4349 aa7.77□□□□□ -1.17
CHMP3-204ENST00000409727 A0A1B0GX51 115 aa7.77□□□□□ -1.17
CHMP3-204ENST00000409727 PRLHP81277 87 aa7.77□□□□□ -1.17
CHMP3-204ENST00000409727 Q6ZQY7 126 aa7.77□□□□□ -1.17
CHMP3-204ENST00000409727 H3BT86 120 aa7.76□□□□□ -1.17
CHMP3-204ENST00000409727 ORMDL1Q9P0S3 153 aa7.76□□□□□ -1.17
CHMP3-204ENST00000409727 EPM2AB3EWF7 344 aa7.75□□□□□ -1.17
CHMP3-204ENST00000409727 CIRBP-AS1Q8TBR5 109 aa7.75□□□□□ -1.17
CHMP3-204ENST00000409727 Q9BRP9 147 aa7.75□□□□□ -1.17
CHMP3-204ENST00000409727 RYR2Q92736 4967 aa7.74□□□□□ -1.17
CHMP3-204ENST00000409727 A0A1B0GV72 72 aa7.74□□□□□ -1.17
CHMP3-204ENST00000409727 FAM229AH3BQW9 127 aa7.74□□□□□ -1.17
CHMP3-204ENST00000409727 SCXQ7RTU7 201 aa7.74□□□□□ -1.17
CHMP3-204ENST00000409727 DNAH11Q96DT5 4516 aa7.73□□□□□ -1.17
CHMP3-204ENST00000409727 A0A1B0GVY2 172 aa7.72□□□□□ -1.17
CHMP3-204ENST00000409727 TEN1Q86WV5 123 aa7.72□□□□□ -1.17
CHMP3-204ENST00000409727 DHRS4-AS1Q9P1J3 65 aa7.72□□□□□ -1.17
CHMP3-204ENST00000409727 PKD1P98161 4303 aa7.72□□□□□ -1.17
CHMP3-204ENST00000409727 TEX49A0A1B0GTD5 131 aa7.72□□□□□ -1.17
CHMP3-204ENST00000409727 ERC2-IT1O76042 136 aa7.72□□□□□ -1.17
CHMP3-204ENST00000409727 GHRHP01286 108 aa7.72□□□□□ -1.17
CHMP3-204ENST00000409727 UBE2AP49459 152 aa7.72□□□□□ -1.17
CHMP3-204ENST00000409727 Q6ZSA8 131 aa7.72□□□□□ -1.17
CHMP3-204ENST00000409727 DEFB105AQ8NG35 78 aa7.72□□□□□ -1.17
CHMP3-204ENST00000409727 HIGD2AQ9BW72 106 aa7.72□□□□□ -1.17
CHMP3-204ENST00000409727 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.71□□□□□ -1.18
CHMP3-204ENST00000409727 SMCR5Q8TEV8 140 aa7.71□□□□□ -1.18
CHMP3-204ENST00000409727 DNAH5Q8TE73 4624 aa7.71□□□□□ -1.18
CHMP3-204ENST00000409727 BCE1O60756 84 aa7.7□□□□□ -1.18
CHMP3-204ENST00000409727 INAFM2P0DMQ5 153 aa7.7□□□□□ -1.18
CHMP3-204ENST00000409727 ST20-AS1Q8NBB2 130 aa7.7□□□□□ -1.18
CHMP3-204ENST00000409727 PSORS1C2Q9UIG4 136 aa7.7□□□□□ -1.18
CHMP3-204ENST00000409727 TMEM256-PLSCR3K7ERE1 68 aa7.7□□□□□ -1.18
CHMP3-204ENST00000409727 C1orf137Q5JT78 98 aa7.69□□□□□ -1.18
CHMP3-204ENST00000409727 LINC01600Q96MT4 127 aa7.69□□□□□ -1.18
CHMP3-204ENST00000409727 OCIAD2Q56VL3 154 aa7.68□□□□□ -1.18
CHMP3-204ENST00000409727 PPDPFLQ8WWR9 84 aa7.67□□□□□ -1.18
CHMP3-204ENST00000409727 PCP4P48539 62 aa7.66□□□□□ -1.18
CHMP3-204ENST00000409727 LAMTOR3Q9UHA4 124 aa7.66□□□□□ -1.18
CHMP3-204ENST00000409727 H0Y9J4 135 aa7.64□□□□□ -1.19
CHMP3-204ENST00000409727 Q8N377 158 aa7.64□□□□□ -1.19
CHMP3-204ENST00000409727 C3orf22Q8N5N4 141 aa7.64□□□□□ -1.19
CHMP3-204ENST00000409727 C14orf132Q9NPU4 83 aa7.64□□□□□ -1.19
CHMP3-204ENST00000409727 LINC01547P58512 204 aaPredicted RBP7.64□□□□□ -1.19
CHMP3-204ENST00000409727 KRTAP13-1Q8IUC0 172 aa7.64□□□□□ -1.19
CHMP3-204ENST00000409727 PKHD1P08F94 4074 aa7.63□□□□□ -1.19
CHMP3-204ENST00000409727 H3BQ85 93 aa7.62□□□□□ -1.19
CHMP3-204ENST00000409727 K7ERU9 68 aa7.62□□□□□ -1.19
CHMP3-204ENST00000409727 NDUFV3P56181 108 aaKnown RBP7.62□□□□□ -1.19
CHMP3-204ENST00000409727 C21orf62-AS1Q17RA5 79 aa7.62□□□□□ -1.19
CHMP3-204ENST00000409727 DNAH8Q96JB1 4490 aa7.61□□□□□ -1.19
CHMP3-204ENST00000409727 RYR3Q15413 4870 aa7.61□□□□□ -1.19
CHMP3-204ENST00000409727 GAGE2AQ6NT46 116 aa7.61□□□□□ -1.19
CHMP3-204ENST00000409727 IGLV5-48A0A075B6I7 105 aa7.6□□□□□ -1.19
CHMP3-204ENST00000409727 JMJD7-PLA2G4BH0Y9G9 81 aa7.6□□□□□ -1.19
CHMP3-204ENST00000409727 J3QR89 54 aa7.6□□□□□ -1.19
CHMP3-204ENST00000409727 IGLV7-43P04211 117 aa7.6□□□□□ -1.19
CHMP3-204ENST00000409727 OBSCN-AS1Q96MR7 158 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms