RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 HIST2H2BEQ16778 126 aa5.24□□□□□ -1.57
NIF3L1-203ENST00000409129 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.24□□□□□ -1.57
NIF3L1-203ENST00000409129 TMEM170BQ5T4T1 132 aa5.24□□□□□ -1.57
NIF3L1-203ENST00000409129 SFTA2Q6UW10 78 aa5.24□□□□□ -1.57
NIF3L1-203ENST00000409129 HIST1H2BHQ93079 126 aa5.24□□□□□ -1.57
NIF3L1-203ENST00000409129 C14orf144Q96I85 54 aa5.24□□□□□ -1.57
NIF3L1-203ENST00000409129 HIST1H2BNQ99877 126 aa5.24□□□□□ -1.57
NIF3L1-203ENST00000409129 HIST1H2BMQ99879 126 aa5.24□□□□□ -1.57
NIF3L1-203ENST00000409129 HIGD2AQ9BW72 106 aa5.24□□□□□ -1.57
NIF3L1-203ENST00000409129 LEPROTL1O95214 131 aa5.23□□□□□ -1.57
NIF3L1-203ENST00000409129 LINC00158P58513 81 aa5.23□□□□□ -1.57
NIF3L1-203ENST00000409129 SNRPEP62304 92 aaKnown RBP5.23□□□□□ -1.57
NIF3L1-203ENST00000409129 SPRR4Q96PI1 79 aa5.23□□□□□ -1.57
NIF3L1-203ENST00000409129 TSTD3H0UI37 97 aa5.22□□□□□ -1.57
NIF3L1-203ENST00000409129 TRIAP1O43715 76 aa5.22□□□□□ -1.57
NIF3L1-203ENST00000409129 PMCHL2Q9BQD1 86 aa5.22□□□□□ -1.57
NIF3L1-203ENST00000409129 TRAV12-1A0A0B4J245 112 aa5.21□□□□□ -1.58
NIF3L1-203ENST00000409129 FP248Q71RG6 208 aaPredicted RBP5.21□□□□□ -1.58
NIF3L1-203ENST00000409129 ZNF706Q9Y5V0 76 aaPredicted RBP5.21□□□□□ -1.58
NIF3L1-203ENST00000409129 A0A0U1RRA0 63 aa5.2□□□□□ -1.58
NIF3L1-203ENST00000409129 LINC00337Q8N6G1 96 aa5.2□□□□□ -1.58
NIF3L1-203ENST00000409129 HSPB8Q9UJY1 196 aa5.2□□□□□ -1.58
NIF3L1-203ENST00000409129 TMEM223A0PJW6 202 aa5.19□□□□□ -1.58
NIF3L1-203ENST00000409129 PRYO14603 147 aa5.19□□□□□ -1.58
NIF3L1-203ENST00000409129 S100A2P29034 98 aa5.19□□□□□ -1.58
NIF3L1-203ENST00000409129 DDTP30046 118 aa5.19□□□□□ -1.58
NIF3L1-203ENST00000409129 LINC01547P58512 204 aaPredicted RBP5.19□□□□□ -1.58
NIF3L1-203ENST00000409129 DAND5Q8N907 189 aa5.19□□□□□ -1.58
NIF3L1-203ENST00000409129 Q8NBF4 154 aa5.19□□□□□ -1.58
NIF3L1-203ENST00000409129 SMCR5Q8TEV8 140 aa5.19□□□□□ -1.58
NIF3L1-203ENST00000409129 SMIM13P0DJ93 91 aa5.18□□□□□ -1.58
NIF3L1-203ENST00000409129 KRTAP13-3Q3SY46 172 aa5.18□□□□□ -1.58
NIF3L1-203ENST00000409129 BOD1L2Q8IYS8 172 aa5.18□□□□□ -1.58
NIF3L1-203ENST00000409129 KCNQ1DNQ9H478 68 aa5.18□□□□□ -1.58
NIF3L1-203ENST00000409129 SPINK1P00995 79 aa5.17□□□□□ -1.58
NIF3L1-203ENST00000409129 SPRR1AP35321 89 aa5.17□□□□□ -1.58
NIF3L1-203ENST00000409129 ASB16-AS1Q495Z4 193 aa5.17□□□□□ -1.58
NIF3L1-203ENST00000409129 MAP1LC3CQ9BXW4 147 aa5.17□□□□□ -1.58
NIF3L1-203ENST00000409129 ETDCA0A1B0GVM5 59 aa5.16□□□□□ -1.58
NIF3L1-203ENST00000409129 KRTAP4-16G5E9R7 235 aaPredicted RBP5.16□□□□□ -1.58
NIF3L1-203ENST00000409129 NCR3O14931 201 aa5.16□□□□□ -1.58
NIF3L1-203ENST00000409129 DLEU1O43261 78 aa5.16□□□□□ -1.58
NIF3L1-203ENST00000409129 DPM2O94777 84 aa5.16□□□□□ -1.58
NIF3L1-203ENST00000409129 PLNP26678 52 aa5.16□□□□□ -1.58
NIF3L1-203ENST00000409129 TSPEAR-AS2P59090 65 aa5.16□□□□□ -1.58
NIF3L1-203ENST00000409129 LINC00483Q53H64 154 aa5.16□□□□□ -1.58
NIF3L1-203ENST00000409129 MEIG1Q5JSS6 88 aa5.16□□□□□ -1.58
NIF3L1-203ENST00000409129 MIR7-3HGQ8N6C7 128 aa5.16□□□□□ -1.58
NIF3L1-203ENST00000409129 KRTAP4-1Q9BYQ7 146 aa5.16□□□□□ -1.58
NIF3L1-203ENST00000409129 TRBV10-3A0A0K0K1G6 114 aa5.15□□□□□ -1.59
NIF3L1-203ENST00000409129 IGKCP01834 107 aa5.15□□□□□ -1.59
NIF3L1-203ENST00000409129 HERV-K104P63124 156 aa5.15□□□□□ -1.59
NIF3L1-203ENST00000409129 SYS1-DBNDD2H3BUS1 97 aa5.14□□□□□ -1.59
NIF3L1-203ENST00000409129 C3orf79P0CE67 100 aa5.14□□□□□ -1.59
NIF3L1-203ENST00000409129 SEC61BP60468 96 aaKnown RBP5.14□□□□□ -1.59
NIF3L1-203ENST00000409129 KRTDAPP60985 99 aa5.14□□□□□ -1.59
NIF3L1-203ENST00000409129 COA6Q5JTJ3 125 aaKnown RBP5.14□□□□□ -1.59
NIF3L1-203ENST00000409129 GAGE2AQ6NT46 116 aa5.14□□□□□ -1.59
NIF3L1-203ENST00000409129 M0R143 59 aa5.13□□□□□ -1.59
NIF3L1-203ENST00000409129 HERVK_113P61574 105 aa5.13□□□□□ -1.59
NIF3L1-203ENST00000409129 PYY3Q5JQD4 70 aa5.13□□□□□ -1.59
NIF3L1-203ENST00000409129 SSBP3-AS1Q7Z2R9 100 aa5.13□□□□□ -1.59
NIF3L1-203ENST00000409129 NDUFA12Q9UI09 145 aa5.13□□□□□ -1.59
NIF3L1-203ENST00000409129 IGLV9-49A0A0B4J1Y8 123 aa5.12□□□□□ -1.59
NIF3L1-203ENST00000409129 MYMXA0A1B0GTQ4 84 aa5.12□□□□□ -1.59
NIF3L1-203ENST00000409129 J3QQQ9 107 aa5.12□□□□□ -1.59
NIF3L1-203ENST00000409129 LEPROTO15243 131 aa5.12□□□□□ -1.59
NIF3L1-203ENST00000409129 ERC2-IT1O76042 136 aa5.12□□□□□ -1.59
NIF3L1-203ENST00000409129 RPS29P62273 56 aaKnown RBP5.12□□□□□ -1.59
NIF3L1-203ENST00000409129 MOBPQ13875 183 aa5.12□□□□□ -1.59
NIF3L1-203ENST00000409129 LINC01545Q5VT33 79 aa5.12□□□□□ -1.59
NIF3L1-203ENST00000409129 Q8N377 158 aa5.12□□□□□ -1.59
NIF3L1-203ENST00000409129 LOC107984156A0A0G2JMH3 177 aa5.11□□□□□ -1.59
NIF3L1-203ENST00000409129 LGALS3P17931 250 aaKnown RBP5.11□□□□□ -1.59
NIF3L1-203ENST00000409129 PET117Q6UWS5 81 aa5.11□□□□□ -1.59
NIF3L1-203ENST00000409129 ARL17AQ8IVW1 177 aa5.11□□□□□ -1.59
NIF3L1-203ENST00000409129 TRBV10-2A0A0K0K1G8 114 aa5.1□□□□□ -1.59
NIF3L1-203ENST00000409129 SLC25A20O43772 301 aa5.1□□□□□ -1.59
NIF3L1-203ENST00000409129 ATOH7Q8N100 152 aa5.1□□□□□ -1.59
NIF3L1-203ENST00000409129 HIST3H2BBQ8N257 126 aa5.1□□□□□ -1.59
NIF3L1-203ENST00000409129 Q9BRP9 147 aa5.1□□□□□ -1.59
NIF3L1-203ENST00000409129 Q6ZRX8 168 aa5.09□□□□□ -1.59
NIF3L1-203ENST00000409129 TTTY13Q9BZ97 58 aa5.09□□□□□ -1.59
NIF3L1-203ENST00000409129 C20orf202A1L168 122 aa5.08□□□□□ -1.6
NIF3L1-203ENST00000409129 E9PLD3 99 aa5.08□□□□□ -1.6
NIF3L1-203ENST00000409129 NPC2P61916 151 aa5.08□□□□□ -1.6
NIF3L1-203ENST00000409129 HIST1H2BLQ99880 126 aa5.08□□□□□ -1.6
NIF3L1-203ENST00000409129 SPANXB1Q9NS25 103 aaPredicted RBP5.08□□□□□ -1.6
NIF3L1-203ENST00000409129 IGLV6-57P01721 117 aa5.07□□□□□ -1.6
NIF3L1-203ENST00000409129 NMUP48645 174 aa5.07□□□□□ -1.6
NIF3L1-203ENST00000409129 JOSD1Q15040 202 aaPredicted RBP5.07□□□□□ -1.6
NIF3L1-203ENST00000409129 S100A7L2Q5SY68 101 aa5.07□□□□□ -1.6
NIF3L1-203ENST00000409129 PRO1933Q9H354 126 aa5.07□□□□□ -1.6
NIF3L1-203ENST00000409129 A0A0J9YXY3 114 aa5.06□□□□□ -1.6
NIF3L1-203ENST00000409129 NDUFC2O95298 119 aa5.06□□□□□ -1.6
NIF3L1-203ENST00000409129 C9orf153Q5TBE3 101 aa5.06□□□□□ -1.6
NIF3L1-203ENST00000409129 MIEN1Q9BRT3 115 aa5.06□□□□□ -1.6
NIF3L1-203ENST00000409129 TRAV23DV6A0A075B6W5 121 aa5.05□□□□□ -1.6
NIF3L1-203ENST00000409129 ZNF815PA8K554 130 aa5.05□□□□□ -1.6
NIF3L1-203ENST00000409129 SNHG12Q9BXW3 62 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms