RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 TRBV10-3A0A0K0K1G6 114 aa11.16□□□□□ -0.62
SMARCB1-204ENST00000407422 SPRR1AP35321 89 aa11.16□□□□□ -0.62
SMARCB1-204ENST00000407422 MAP1LC3CQ9BXW4 147 aa11.16□□□□□ -0.62
SMARCB1-204ENST00000407422 DPM2O94777 84 aa11.15□□□□□ -0.62
SMARCB1-204ENST00000407422 OCIAD2Q56VL3 154 aa11.15□□□□□ -0.62
SMARCB1-204ENST00000407422 PET117Q6UWS5 81 aa11.15□□□□□ -0.62
SMARCB1-204ENST00000407422 PAM16Q9Y3D7 125 aa11.15□□□□□ -0.62
SMARCB1-204ENST00000407422 KRTAP4-16G5E9R7 235 aaPredicted RBP11.14□□□□□ -0.63
SMARCB1-204ENST00000407422 J3QQQ9 107 aa11.14□□□□□ -0.63
SMARCB1-204ENST00000407422 K7ERU9 68 aa11.14□□□□□ -0.63
SMARCB1-204ENST00000407422 LINC00337Q8N6G1 96 aa11.14□□□□□ -0.63
SMARCB1-204ENST00000407422 IGKCP01834 107 aa11.13□□□□□ -0.63
SMARCB1-204ENST00000407422 LOC107984156A0A0G2JMH3 177 aa11.12□□□□□ -0.63
SMARCB1-204ENST00000407422 ARL17AQ8IVW1 177 aa11.12□□□□□ -0.63
SMARCB1-204ENST00000407422 HERVK_113P61574 105 aa11.11□□□□□ -0.63
SMARCB1-204ENST00000407422 SMCR5Q8TEV8 140 aa11.11□□□□□ -0.63
SMARCB1-204ENST00000407422 ETDCA0A1B0GVM5 59 aa11.1□□□□□ -0.63
SMARCB1-204ENST00000407422 A6NJY4 79 aa11.1□□□□□ -0.63
SMARCB1-204ENST00000407422 ZNF706Q9Y5V0 76 aaPredicted RBP11.1□□□□□ -0.63
SMARCB1-204ENST00000407422 LGALS3P17931 250 aaKnown RBP11.09□□□□□ -0.63
SMARCB1-204ENST00000407422 SPATA45Q537H7 98 aa11.09□□□□□ -0.63
SMARCB1-204ENST00000407422 NMUP48645 174 aa11.09□□□□□ -0.63
SMARCB1-204ENST00000407422 PPDPFQ9H3Y8 114 aa11.09□□□□□ -0.63
SMARCB1-204ENST00000407422 SCGB1A1P11684 91 aa11.08□□□□□ -0.64
SMARCB1-204ENST00000407422 TRBV10-2A0A0K0K1G8 114 aa11.06□□□□□ -0.64
SMARCB1-204ENST00000407422 B5MCH6 92 aa11.06□□□□□ -0.64
SMARCB1-204ENST00000407422 EIF4EBP3O60516 100 aaPredicted RBP11.06□□□□□ -0.64
SMARCB1-204ENST00000407422 ERC2-IT1O76042 136 aa11.05□□□□□ -0.64
SMARCB1-204ENST00000407422 ADAMTSL4-AS1Q5T5F5 129 aa11.05□□□□□ -0.64
SMARCB1-204ENST00000407422 SPANXB1Q9NS25 103 aaPredicted RBP11.05□□□□□ -0.64
SMARCB1-204ENST00000407422 IGLV7-46A0A075B6I9 117 aa11.04□□□□□ -0.64
SMARCB1-204ENST00000407422 NPC2P61916 151 aa11.04□□□□□ -0.64
SMARCB1-204ENST00000407422 VAMP3Q15836 100 aa11.04□□□□□ -0.64
SMARCB1-204ENST00000407422 SOSTDC1Q6X4U4 206 aa11.04□□□□□ -0.64
SMARCB1-204ENST00000407422 A0A0J9YXY3 114 aa11.03□□□□□ -0.64
SMARCB1-204ENST00000407422 E9PLD3 99 aa11.03□□□□□ -0.64
SMARCB1-204ENST00000407422 SPAG11AQ6PDA7 123 aa11.03□□□□□ -0.64
SMARCB1-204ENST00000407422 Q8NBF4 154 aa11.03□□□□□ -0.64
SMARCB1-204ENST00000407422 LINC00483Q53H64 154 aa11.02□□□□□ -0.64
SMARCB1-204ENST00000407422 Q9BRP9 147 aa11.02□□□□□ -0.64
SMARCB1-204ENST00000407422 SYS1-DBNDD2H3BUS1 97 aa11.02□□□□□ -0.65
SMARCB1-204ENST00000407422 NDUFC2O95298 119 aa11.02□□□□□ -0.65
SMARCB1-204ENST00000407422 IGLV6-57P01721 117 aa11.02□□□□□ -0.65
SMARCB1-204ENST00000407422 GAGE2AQ6NT46 116 aa11.02□□□□□ -0.65
SMARCB1-204ENST00000407422 MUC17Q685J3 4493 aa11.01□□□□□ -0.65
SMARCB1-204ENST00000407422 HINT1P49773 126 aaPredicted RBP11.01□□□□□ -0.65
SMARCB1-204ENST00000407422 TPRXLQ17RH7 258 aa11.01□□□□□ -0.65
SMARCB1-204ENST00000407422 S100A7L2Q5SY68 101 aa11.01□□□□□ -0.65
SMARCB1-204ENST00000407422 C4orf48Q5BLP8 95 aa11□□□□□ -0.65
SMARCB1-204ENST00000407422 Q6ZRX8 168 aa11□□□□□ -0.65
SMARCB1-204ENST00000407422 KRTDAPP60985 99 aa10.99□□□□□ -0.65
SMARCB1-204ENST00000407422 CDIP1Q9H305 208 aa10.99□□□□□ -0.65
SMARCB1-204ENST00000407422 TAX1BP3O14907 124 aa10.98□□□□□ -0.65
SMARCB1-204ENST00000407422 TRAV23DV6A0A075B6W5 121 aa10.97□□□□□ -0.65
SMARCB1-204ENST00000407422 LINC01545Q5VT33 79 aa10.96□□□□□ -0.65
SMARCB1-204ENST00000407422 LITAFQ99732 161 aa10.96□□□□□ -0.65
SMARCB1-204ENST00000407422 IGLV9-49A0A0B4J1Y8 123 aa10.95□□□□□ -0.66
SMARCB1-204ENST00000407422 A0A1B0GV72 72 aa10.95□□□□□ -0.66
SMARCB1-204ENST00000407422 C3orf79P0CE67 100 aa10.95□□□□□ -0.66
SMARCB1-204ENST00000407422 MOBPQ13875 183 aa10.95□□□□□ -0.66
SMARCB1-204ENST00000407422 ZNF73O43830 326 aaPredicted RBP10.94□□□□□ -0.66
SMARCB1-204ENST00000407422 FAT4Q6V0I7 4981 aa10.93□□□□□ -0.66
SMARCB1-204ENST00000407422 Q6ZVH6 145 aa10.93□□□□□ -0.66
SMARCB1-204ENST00000407422 LINC00308Q8TCZ7 52 aa10.93□□□□□ -0.66
SMARCB1-204ENST00000407422 SPINK1P00995 79 aa10.92□□□□□ -0.66
SMARCB1-204ENST00000407422 TTTY13Q9BZ97 58 aa10.92□□□□□ -0.66
SMARCB1-204ENST00000407422 FP248Q71RG6 208 aaPredicted RBP10.91□□□□□ -0.66
SMARCB1-204ENST00000407422 BVES-AS1Q5T3Y7 98 aa10.91□□□□□ -0.66
SMARCB1-204ENST00000407422 A0A0U1RQV1 116 aa10.9□□□□□ -0.66
SMARCB1-204ENST00000407422 ZNF815PA8K554 130 aa10.9□□□□□ -0.66
SMARCB1-204ENST00000407422 TIMM17BO60830 172 aa10.9□□□□□ -0.66
SMARCB1-204ENST00000407422 GTF2H5Q6ZYL4 71 aa10.9□□□□□ -0.66
SMARCB1-204ENST00000407422 ST20-AS1Q8NBB2 130 aa10.9□□□□□ -0.66
SMARCB1-204ENST00000407422 SPANXCQ9NY87 97 aa10.9□□□□□ -0.66
SMARCB1-204ENST00000407422 SSBP3-AS1Q7Z2R9 100 aa10.89□□□□□ -0.67
SMARCB1-204ENST00000407422 OR13C6PQ8NH95 151 aa10.87□□□□□ -0.67
SMARCB1-204ENST00000407422 KRTAP13-3Q3SY46 172 aa10.86□□□□□ -0.67
SMARCB1-204ENST00000407422 C9orf153Q5TBE3 101 aa10.84□□□□□ -0.67
SMARCB1-204ENST00000407422 Q8N377 158 aa10.84□□□□□ -0.67
SMARCB1-204ENST00000407422 MTURNQ8N3F0 131 aa10.84□□□□□ -0.67
SMARCB1-204ENST00000407422 SLC25A34Q6PIV7 304 aa10.84□□□□□ -0.67
SMARCB1-204ENST00000407422 RPS29P62273 56 aaKnown RBP10.82□□□□□ -0.68
SMARCB1-204ENST00000407422 SPANXDQ9BXN6 97 aa10.82□□□□□ -0.68
SMARCB1-204ENST00000407422 K7EP34 96 aa10.81□□□□□ -0.68
SMARCB1-204ENST00000407422 SIGMAR1Q99720 223 aa10.81□□□□□ -0.68
SMARCB1-204ENST00000407422 C9orf118A6NHY6 69 aa10.79□□□□□ -0.68
SMARCB1-204ENST00000407422 ATOH7Q8N100 152 aa10.79□□□□□ -0.68
SMARCB1-204ENST00000407422 SCGB1D4Q6XE38 83 aa10.78□□□□□ -0.68
SMARCB1-204ENST00000407422 SLC25A20O43772 301 aa10.77□□□□□ -0.68
SMARCB1-204ENST00000407422 C6orf99Q4VX62 202 aa10.77□□□□□ -0.68
SMARCB1-204ENST00000407422 LCE2AQ5TA79 106 aaPredicted RBP10.77□□□□□ -0.68
SMARCB1-204ENST00000407422 DHRS4-AS1Q9P1J3 65 aa10.77□□□□□ -0.68
SMARCB1-204ENST00000407422 SPRR1BP22528 89 aa10.76□□□□□ -0.69
SMARCB1-204ENST00000407422 ELOF1P60002 83 aaKnown RBP10.76□□□□□ -0.69
SMARCB1-204ENST00000407422 A6NDN8 102 aa10.76□□□□□ -0.69
SMARCB1-204ENST00000407422 COX7BP24311 80 aa10.76□□□□□ -0.69
SMARCB1-204ENST00000407422 HSD52Q0P140 79 aa10.74□□□□□ -0.69
SMARCB1-204ENST00000407422 PCP2Q8IVA1 136 aa10.74□□□□□ -0.69
SMARCB1-204ENST00000407422 J3QR89 54 aa10.73□□□□□ -0.69
SMARCB1-204ENST00000407422 ASB16-AS1Q495Z4 193 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms