RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.83■□□□□ 0.12
DNMT3A-206ENST00000406659 PRYO14603 147 aa15.82■□□□□ 0.12
DNMT3A-206ENST00000406659 MRPL55Q7Z7F7 128 aaKnown RBP15.82■□□□□ 0.12
DNMT3A-206ENST00000406659 CCKP06307 115 aa15.82■□□□□ 0.12
DNMT3A-206ENST00000406659 C16orf90A8MZG2 172 aa15.81■□□□□ 0.12
DNMT3A-206ENST00000406659 DNAH7Q8WXX0 4024 aa15.81■□□□□ 0.12
DNMT3A-206ENST00000406659 A0A096LNI7 61 aa15.8■□□□□ 0.12
DNMT3A-206ENST00000406659 SMCR5Q8TEV8 140 aa15.8■□□□□ 0.12
DNMT3A-206ENST00000406659 PLECQ15149 4684 aaKnown RBP15.8■□□□□ 0.12
DNMT3A-206ENST00000406659 RBM3P98179 157 aaKnown RBP15.8■□□□□ 0.12
DNMT3A-206ENST00000406659 LRCOL1A6NCL2 159 aa15.78■□□□□ 0.12
DNMT3A-206ENST00000406659 SDIM1Q6ZPB5 146 aa15.78■□□□□ 0.12
DNMT3A-206ENST00000406659 LINC00643Q86TS7 51 aa15.78■□□□□ 0.12
DNMT3A-206ENST00000406659 IGKV2-24A0A0C4DH68 120 aa15.77■□□□□ 0.12
DNMT3A-206ENST00000406659 M0R2N4 97 aa15.77■□□□□ 0.12
DNMT3A-206ENST00000406659 Q6ZRN7 208 aaPredicted RBP15.77■□□□□ 0.11
DNMT3A-206ENST00000406659 DNAH10Q8IVF4 4471 aa15.76■□□□□ 0.11
DNMT3A-206ENST00000406659 ETDCA0A1B0GVM5 59 aa15.76■□□□□ 0.11
DNMT3A-206ENST00000406659 Q6Q795 121 aa15.75■□□□□ 0.11
DNMT3A-206ENST00000406659 SPRR1AP35321 89 aa15.74■□□□□ 0.11
DNMT3A-206ENST00000406659 B5MCH6 92 aa15.73■□□□□ 0.11
DNMT3A-206ENST00000406659 DHRS4-AS1Q9P1J3 65 aa15.73■□□□□ 0.11
DNMT3A-206ENST00000406659 KRTAP4-16G5E9R7 235 aaPredicted RBP15.72■□□□□ 0.11
DNMT3A-206ENST00000406659 Q6ZRX8 168 aa15.72■□□□□ 0.11
DNMT3A-206ENST00000406659 LINC00846Q9NV44 126 aa15.72■□□□□ 0.11
DNMT3A-206ENST00000406659 PKIGQ9Y2B9 76 aa15.72■□□□□ 0.11
DNMT3A-206ENST00000406659 LOC110117498A0A087WWA1 95 aa15.71■□□□□ 0.11
DNMT3A-206ENST00000406659 DSCR8Q96T75 97 aa15.71■□□□□ 0.11
DNMT3A-206ENST00000406659 C9orf163Q8N9P6 203 aa15.7■□□□□ 0.1
DNMT3A-206ENST00000406659 A0A1W2PNN7 141 aa15.7■□□□□ 0.1
DNMT3A-206ENST00000406659 NDUFV3P56181 108 aaKnown RBP15.7■□□□□ 0.1
DNMT3A-206ENST00000406659 Q6ZQT0 140 aa15.7■□□□□ 0.1
DNMT3A-206ENST00000406659 TRBV7-7A0A0K0K1E9 115 aa15.69■□□□□ 0.1
DNMT3A-206ENST00000406659 STARD9Q9P2P6 4700 aa15.68■□□□□ 0.1
DNMT3A-206ENST00000406659 REG3GQ6UW15 175 aa15.68■□□□□ 0.1
DNMT3A-206ENST00000406659 VPS13DQ5THJ4 4388 aa15.68■□□□□ 0.1
DNMT3A-206ENST00000406659 PDE6GP18545 87 aa15.67■□□□□ 0.1
DNMT3A-206ENST00000406659 Q9BRP9 147 aa15.65■□□□□ 0.1
DNMT3A-206ENST00000406659 CHTF8P0CG12 524 aa15.64■□□□□ 0.1
DNMT3A-206ENST00000406659 DEFB105AQ8NG35 78 aa15.64■□□□□ 0.09
DNMT3A-206ENST00000406659 IMUPQ9GZP8 106 aa15.64■□□□□ 0.09
DNMT3A-206ENST00000406659 UBE2BP63146 152 aa15.61■□□□□ 0.09
DNMT3A-206ENST00000406659 Q6ZR54 194 aa15.61■□□□□ 0.09
DNMT3A-206ENST00000406659 LINC00474Q9P2X8 69 aa15.6■□□□□ 0.09
DNMT3A-206ENST00000406659 TRBV7-4A0A0J9YYF1 115 aa15.59■□□□□ 0.09
DNMT3A-206ENST00000406659 Q6JHZ5 121 aa15.59■□□□□ 0.09
DNMT3A-206ENST00000406659 Q8N377 158 aa15.59■□□□□ 0.09
DNMT3A-206ENST00000406659 A0A087WTM6 91 aa15.59■□□□□ 0.09
DNMT3A-206ENST00000406659 LINC01547P58512 204 aaPredicted RBP15.56■□□□□ 0.08
DNMT3A-206ENST00000406659 UBL5Q9BZL1 73 aa15.56■□□□□ 0.08
DNMT3A-206ENST00000406659 PHF5AQ7RTV0 110 aaKnown RBP15.55■□□□□ 0.08
DNMT3A-206ENST00000406659 IGKV3D-7A0A0C4DH55 119 aa15.54■□□□□ 0.08
DNMT3A-206ENST00000406659 FAM19A1Q7Z5A9 133 aa15.54■□□□□ 0.08
DNMT3A-206ENST00000406659 ST20-AS1Q8NBB2 130 aa15.54■□□□□ 0.08
DNMT3A-206ENST00000406659 ERC2-IT1O76042 136 aa15.53■□□□□ 0.08
DNMT3A-206ENST00000406659 DPH3Q96FX2 82 aa15.53■□□□□ 0.08
DNMT3A-206ENST00000406659 ANAPC13Q9BS18 74 aa15.53■□□□□ 0.08
DNMT3A-206ENST00000406659 IGLV5-48A0A075B6I7 105 aa15.51■□□□□ 0.07
DNMT3A-206ENST00000406659 LY6G6CO95867 125 aa15.51■□□□□ 0.07
DNMT3A-206ENST00000406659 C1orf134Q5TEV5 83 aa15.5■□□□□ 0.07
DNMT3A-206ENST00000406659 FBN3Q75N90 2809 aa15.5■□□□□ 0.07
DNMT3A-206ENST00000406659 WWC2-AS2Q96NR7 200 aa15.48■□□□□ 0.07
DNMT3A-206ENST00000406659 PRLHP81277 87 aa15.47■□□□□ 0.07
DNMT3A-206ENST00000406659 ATP5EP2Q5VTU8 51 aa15.47■□□□□ 0.07
DNMT3A-206ENST00000406659 PANO1I0J062 215 aa15.47■□□□□ 0.07
DNMT3A-206ENST00000406659 C3orf22Q8N5N4 141 aa15.46■□□□□ 0.07
DNMT3A-206ENST00000406659 FAM236AA0A1B0GUQ0 79 aa15.45■□□□□ 0.06
DNMT3A-206ENST00000406659 FAM236BA0A1B0GV22 79 aa15.45■□□□□ 0.06
DNMT3A-206ENST00000406659 KRTAP11-1Q8IUC1 163 aa15.45■□□□□ 0.06
DNMT3A-206ENST00000406659 RTL8CO15255 209 aa15.44■□□□□ 0.06
DNMT3A-206ENST00000406659 SPACA4Q8TDM5 124 aa15.44■□□□□ 0.06
DNMT3A-206ENST00000406659 HIGD2AQ9BW72 106 aa15.42■□□□□ 0.06
DNMT3A-206ENST00000406659 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.42■□□□□ 0.06
DNMT3A-206ENST00000406659 FUSP35637 526 aaKnown RBP eCLIP15.41■□□□□ 0.06
DNMT3A-206ENST00000406659 Q6ZVQ6 151 aa15.41■□□□□ 0.06
DNMT3A-206ENST00000406659 LINC00476Q8WZB0 136 aa15.4■□□□□ 0.06
DNMT3A-206ENST00000406659 H0Y9J4 135 aa15.39■□□□□ 0.05
DNMT3A-206ENST00000406659 EPM2AB3EWF7 344 aa15.37■□□□□ 0.05
DNMT3A-206ENST00000406659 TNP2Q05952 138 aa15.37■□□□□ 0.05
DNMT3A-206ENST00000406659 UBE2AP49459 152 aa15.36■□□□□ 0.05
DNMT3A-206ENST00000406659 HIST1H4AP62805 103 aaKnown RBP15.36■□□□□ 0.05
DNMT3A-206ENST00000406659 HAMPP81172 84 aa15.36■□□□□ 0.05
DNMT3A-206ENST00000406659 KMT2AQ03164 3969 aa15.35■□□□□ 0.05
DNMT3A-206ENST00000406659 IGLV5-52A0A0A0MRZ9 124 aa15.35■□□□□ 0.05
DNMT3A-206ENST00000406659 C1orf137Q5JT78 98 aa15.35■□□□□ 0.05
DNMT3A-206ENST00000406659 SMIM29Q86T20 159 aa15.34■□□□□ 0.05
DNMT3A-206ENST00000406659 F8WEM9 126 aa15.33■□□□□ 0.04
DNMT3A-206ENST00000406659 BCE1O60756 84 aa15.33■□□□□ 0.04
DNMT3A-206ENST00000406659 TGP01266 2768 aa15.32■□□□□ 0.04
DNMT3A-206ENST00000406659 A0A087WVE0 104 aa15.32■□□□□ 0.04
DNMT3A-206ENST00000406659 DNAH6Q9C0G6 4158 aa15.29■□□□□ 0.04
DNMT3A-206ENST00000406659 HECTD4Q9Y4D8 3996 aa15.28■□□□□ 0.04
DNMT3A-206ENST00000406659 DNAH2Q9P225 4427 aa15.28■□□□□ 0.04
DNMT3A-206ENST00000406659 C3orf84H3BNL1 204 aa15.28■□□□□ 0.04
DNMT3A-206ENST00000406659 CXCL6P80162 114 aa15.28■□□□□ 0.04
DNMT3A-206ENST00000406659 A0A1B0GW54 56 aa15.27■□□□□ 0.04
DNMT3A-206ENST00000406659 A0A1W2PNM2 257 aa15.27■□□□□ 0.04
DNMT3A-206ENST00000406659 NREPQ16612 68 aa15.26■□□□□ 0.03
DNMT3A-206ENST00000406659 Q8NBF4 154 aa15.25■□□□□ 0.03
DNMT3A-206ENST00000406659 DNAH17Q9UFH2 4485 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms