RNA–Protein interactions for RNA: ENST00000405666.5

ESRRA-202, Transcript of estrogen related receptor alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ESRRA, Length 2,283 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ESRRA-202ENST00000405666 LINC00474Q9P2X8 69 aa13.6□□□□□ -0.23
ESRRA-202ENST00000405666 CAMK2N2Q96S95 79 aa13.59□□□□□ -0.23
ESRRA-202ENST00000405666 TRAV23DV6A0A075B6W5 121 aa13.59□□□□□ -0.23
ESRRA-202ENST00000405666 Q6ZRU5 148 aa13.59□□□□□ -0.23
ESRRA-202ENST00000405666 COL7A1Q02388 2944 aa13.58□□□□□ -0.24
ESRRA-202ENST00000405666 H0YGX0 51 aa13.58□□□□□ -0.24
ESRRA-202ENST00000405666 CD164Q04900 197 aa13.58□□□□□ -0.24
ESRRA-202ENST00000405666 Q9HAA7 133 aa13.58□□□□□ -0.24
ESRRA-202ENST00000405666 A0A087WYN8 130 aa13.56□□□□□ -0.24
ESRRA-202ENST00000405666 RBM3P98179 157 aaKnown RBP13.56□□□□□ -0.24
ESRRA-202ENST00000405666 DNAH1Q9P2D7 4330 aa13.56□□□□□ -0.24
ESRRA-202ENST00000405666 NCR3O14931 201 aa13.56□□□□□ -0.24
ESRRA-202ENST00000405666 STAB2Q8WWQ8 2551 aa13.55□□□□□ -0.24
ESRRA-202ENST00000405666 B9D2Q9BPU9 175 aa13.55□□□□□ -0.24
ESRRA-202ENST00000405666 XAGE1AQ9HD64 81 aa13.53□□□□□ -0.24
ESRRA-202ENST00000405666 F8WEM9 126 aa13.52□□□□□ -0.24
ESRRA-202ENST00000405666 C9orf129Q5T035 196 aaKnown RBP13.52□□□□□ -0.24
ESRRA-202ENST00000405666 LECT2O14960 151 aa13.48□□□□□ -0.25
ESRRA-202ENST00000405666 IGLV6-57P01721 117 aa13.48□□□□□ -0.25
ESRRA-202ENST00000405666 SYCNQ0VAF6 134 aa13.47□□□□□ -0.25
ESRRA-202ENST00000405666 CASC10Q5T4H9 136 aa13.47□□□□□ -0.25
ESRRA-202ENST00000405666 RMI2Q96E14 147 aa13.46□□□□□ -0.26
ESRRA-202ENST00000405666 C6orf99Q4VX62 202 aa13.45□□□□□ -0.26
ESRRA-202ENST00000405666 Q6ZRP5 223 aa13.44□□□□□ -0.26
ESRRA-202ENST00000405666 VPREB1P12018 145 aa13.43□□□□□ -0.26
ESRRA-202ENST00000405666 APLNQ9ULZ1 77 aa13.43□□□□□ -0.26
ESRRA-202ENST00000405666 DYNC2H1Q8NCM8 4307 aaKnown RBP13.43□□□□□ -0.26
ESRRA-202ENST00000405666 LYSTQ99698 3801 aa13.42□□□□□ -0.26
ESRRA-202ENST00000405666 SLPIP03973 132 aa13.42□□□□□ -0.26
ESRRA-202ENST00000405666 LINC00167Q96N53 147 aa13.41□□□□□ -0.26
ESRRA-202ENST00000405666 SNURFQ9Y675 71 aa13.41□□□□□ -0.26
ESRRA-202ENST00000405666 JMJD7-PLA2G4BH0Y9G9 81 aa13.41□□□□□ -0.26
ESRRA-202ENST00000405666 Q8N814 137 aa13.41□□□□□ -0.26
ESRRA-202ENST00000405666 UBL5Q9BZL1 73 aa13.4□□□□□ -0.26
ESRRA-202ENST00000405666 KRTAP1-5Q9BYS1 174 aa13.39□□□□□ -0.27
ESRRA-202ENST00000405666 MPLKIPQ8TAP9 179 aa13.37□□□□□ -0.27
ESRRA-202ENST00000405666 ORMDL1Q9P0S3 153 aa13.37□□□□□ -0.27
ESRRA-202ENST00000405666 TLX1NBP0CAT3 122 aa13.36□□□□□ -0.27
ESRRA-202ENST00000405666 FAM229BQ4G0N7 80 aa13.36□□□□□ -0.27
ESRRA-202ENST00000405666 LINC00575Q6W349 94 aa13.36□□□□□ -0.27
ESRRA-202ENST00000405666 CSMD3Q7Z407 3707 aa13.36□□□□□ -0.27
ESRRA-202ENST00000405666 M0R378 163 aa13.35□□□□□ -0.27
ESRRA-202ENST00000405666 TRBV7-4A0A0J9YYF1 115 aa13.33□□□□□ -0.28
ESRRA-202ENST00000405666 ERC2-IT1O76042 136 aa13.33□□□□□ -0.28
ESRRA-202ENST00000405666 PRKDCP78527 4128 aaKnown RBP13.33□□□□□ -0.28
ESRRA-202ENST00000405666 UBE2DNLQ8IWF7 75 aa13.33□□□□□ -0.28
ESRRA-202ENST00000405666 DNHD1Q96M86 4753 aa13.33□□□□□ -0.28
ESRRA-202ENST00000405666 ZNF73O43830 326 aaPredicted RBP13.31□□□□□ -0.28
ESRRA-202ENST00000405666 DIRC1Q969H9 104 aa13.31□□□□□ -0.28
ESRRA-202ENST00000405666 DNAH10Q8IVF4 4471 aa13.3□□□□□ -0.28
ESRRA-202ENST00000405666 PLECQ15149 4684 aaKnown RBP13.3□□□□□ -0.28
ESRRA-202ENST00000405666 SERTAD4-AS1Q5TG53 156 aa13.29□□□□□ -0.28
ESRRA-202ENST00000405666 NUPR2A6NF83 97 aa13.28□□□□□ -0.28
ESRRA-202ENST00000405666 TMEM256-PLSCR3K7ERE1 68 aa13.27□□□□□ -0.28
ESRRA-202ENST00000405666 DNAH7Q8WXX0 4024 aa13.27□□□□□ -0.29
ESRRA-202ENST00000405666 MRPL55Q7Z7F7 128 aaKnown RBP13.27□□□□□ -0.29
ESRRA-202ENST00000405666 PLA2G2DQ9UNK4 145 aa13.26□□□□□ -0.29
ESRRA-202ENST00000405666 ELOF1P60002 83 aaKnown RBP13.25□□□□□ -0.29
ESRRA-202ENST00000405666 Q1T7F1 81 aa13.25□□□□□ -0.29
ESRRA-202ENST00000405666 COX7BP24311 80 aa13.24□□□□□ -0.29
ESRRA-202ENST00000405666 CXCL6P80162 114 aa13.23□□□□□ -0.29
ESRRA-202ENST00000405666 NKAPP1Q8N9T2 125 aa13.23□□□□□ -0.29
ESRRA-202ENST00000405666 TENM2Q9NT68 2774 aa13.23□□□□□ -0.29
ESRRA-202ENST00000405666 C7orf33Q8WU49 177 aa13.23□□□□□ -0.29
ESRRA-202ENST00000405666 LINC01547P58512 204 aaPredicted RBP13.22□□□□□ -0.29
ESRRA-202ENST00000405666 TMEM254Q8TBM7 123 aa13.22□□□□□ -0.29
ESRRA-202ENST00000405666 FAM168BA1KXE4 195 aa13.22□□□□□ -0.29
ESRRA-202ENST00000405666 MEGF8Q7Z7M0 2845 aa13.21□□□□□ -0.29
ESRRA-202ENST00000405666 Q6ZQY7 126 aa13.21□□□□□ -0.29
ESRRA-202ENST00000405666 KRTAP7-1Q8IUC3 87 aa13.21□□□□□ -0.29
ESRRA-202ENST00000405666 PSCAO43653 123 aa13.2□□□□□ -0.3
ESRRA-202ENST00000405666 KCNQ1DNQ9H478 68 aa13.2□□□□□ -0.3
ESRRA-202ENST00000405666 IGLV5-37A0A075B6J1 123 aa13.2□□□□□ -0.3
ESRRA-202ENST00000405666 STARD9Q9P2P6 4700 aa13.19□□□□□ -0.3
ESRRA-202ENST00000405666 LINC00528Q8N1L1 170 aa13.19□□□□□ -0.3
ESRRA-202ENST00000405666 CNBPP62633 177 aaKnown RBP13.18□□□□□ -0.3
ESRRA-202ENST00000405666 C4orf48Q5BLP8 95 aa13.18□□□□□ -0.3
ESRRA-202ENST00000405666 FUSP35637 526 aaKnown RBP eCLIP13.17□□□□□ -0.31e-6■■■■■ 27.9
ESRRA-202ENST00000405666 NBDYA0A0U1RRE5 68 aa13.16□□□□□ -0.3
ESRRA-202ENST00000405666 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.16□□□□□ -0.3
ESRRA-202ENST00000405666 NREPQ16612 68 aa13.15□□□□□ -0.3
ESRRA-202ENST00000405666 LOC110117498A0A087WWA1 95 aa13.15□□□□□ -0.3
ESRRA-202ENST00000405666 PRYO14603 147 aa13.14□□□□□ -0.31
ESRRA-202ENST00000405666 IGLV1-50A0A075B6I6 118 aa13.13□□□□□ -0.31
ESRRA-202ENST00000405666 Q6ZQT0 140 aa13.13□□□□□ -0.31
ESRRA-202ENST00000405666 VPS13DQ5THJ4 4388 aa13.13□□□□□ -0.31
ESRRA-202ENST00000405666 RPL37AP8A6NKH3 93 aa13.12□□□□□ -0.31
ESRRA-202ENST00000405666 H3BQ85 93 aa13.12□□□□□ -0.31
ESRRA-202ENST00000405666 Q6ZVQ6 151 aa13.12□□□□□ -0.31
ESRRA-202ENST00000405666 hDV103S1A0JD37 113 aa13.11□□□□□ -0.31
ESRRA-202ENST00000405666 RBM12B-AS1Q9P1G2 102 aa13.11□□□□□ -0.31
ESRRA-202ENST00000405666 C14orf177Q52M58 125 aa13.1□□□□□ -0.31
ESRRA-202ENST00000405666 KTN1-AS1Q86SY8 53 aa13.1□□□□□ -0.31
ESRRA-202ENST00000405666 A0A096LNI7 61 aa13.1□□□□□ -0.31
ESRRA-202ENST00000405666 LRCOL1A6NCL2 159 aa13.1□□□□□ -0.31
ESRRA-202ENST00000405666 Q6ZRN7 208 aaPredicted RBP13.1□□□□□ -0.31
ESRRA-202ENST00000405666 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.09□□□□□ -0.31
ESRRA-202ENST00000405666 C16orf90A8MZG2 172 aa13.09□□□□□ -0.31
ESRRA-202ENST00000405666 KRTAP4-16G5E9R7 235 aaPredicted RBP13.09□□□□□ -0.31
ESRRA-202ENST00000405666 HAMPP81172 84 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 270.7 ms