RNA–Protein interactions for RNA: ENST00000398712.6

SHARPIN-202, Transcript of SHANK associated RH domain interactor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHARPIN, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-202ENST00000398712 IGLV1-50A0A075B6I6 118 aa16.56■□□□□ 0.24
SHARPIN-202ENST00000398712 RBM3P98179 157 aaKnown RBP16.56■□□□□ 0.24
SHARPIN-202ENST00000398712 FAM19A5Q7Z5A7 132 aaPredicted RBP16.55■□□□□ 0.24
SHARPIN-202ENST00000398712 MRPL55Q7Z7F7 128 aaKnown RBP16.54■□□□□ 0.24
SHARPIN-202ENST00000398712 KRTAP7-1Q8IUC3 87 aa16.54■□□□□ 0.24
SHARPIN-202ENST00000398712 TRBV7-7A0A0K0K1E9 115 aa16.53■□□□□ 0.24
SHARPIN-202ENST00000398712 RPL37AP8A6NKH3 93 aa16.53■□□□□ 0.24
SHARPIN-202ENST00000398712 C16orf90A8MZG2 172 aa16.53■□□□□ 0.24
SHARPIN-202ENST00000398712 TGP01266 2768 aa16.52■□□□□ 0.24
SHARPIN-202ENST00000398712 LOC110117498A0A087WWA1 95 aa16.5■□□□□ 0.23
SHARPIN-202ENST00000398712 A0A096LNI7 61 aa16.49■□□□□ 0.23
SHARPIN-202ENST00000398712 SPRR1AP35321 89 aa16.49■□□□□ 0.23
SHARPIN-202ENST00000398712 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.49■□□□□ 0.23
SHARPIN-202ENST00000398712 IMUPQ9GZP8 106 aa16.49■□□□□ 0.23
SHARPIN-202ENST00000398712 LINC00846Q9NV44 126 aa16.49■□□□□ 0.23
SHARPIN-202ENST00000398712 LYSTQ99698 3801 aa16.48■□□□□ 0.23
SHARPIN-202ENST00000398712 DHRS4-AS1Q9P1J3 65 aa16.48■□□□□ 0.23
SHARPIN-202ENST00000398712 ETDCA0A1B0GVM5 59 aa16.47■□□□□ 0.23
SHARPIN-202ENST00000398712 DSCR8Q96T75 97 aa16.47■□□□□ 0.23
SHARPIN-202ENST00000398712 CSMD3Q7Z407 3707 aa16.47■□□□□ 0.23
SHARPIN-202ENST00000398712 LRCOL1A6NCL2 159 aa16.46■□□□□ 0.23
SHARPIN-202ENST00000398712 KRTAP4-16G5E9R7 235 aaPredicted RBP16.46■□□□□ 0.23
SHARPIN-202ENST00000398712 PDE6GP18545 87 aa16.46■□□□□ 0.23
SHARPIN-202ENST00000398712 Q6ZQT0 140 aa16.46■□□□□ 0.23
SHARPIN-202ENST00000398712 Q6ZRX8 168 aa16.46■□□□□ 0.23
SHARPIN-202ENST00000398712 PKIGQ9Y2B9 76 aa16.46■□□□□ 0.23
SHARPIN-202ENST00000398712 B5MCH6 92 aa16.46■□□□□ 0.22
SHARPIN-202ENST00000398712 Q6ZRN7 208 aaPredicted RBP16.45■□□□□ 0.22
SHARPIN-202ENST00000398712 IGKV2-24A0A0C4DH68 120 aa16.43■□□□□ 0.22
SHARPIN-202ENST00000398712 NDUFV3P56181 108 aaKnown RBP16.43■□□□□ 0.22
SHARPIN-202ENST00000398712 Q6JHZ5 121 aa16.4■□□□□ 0.22
SHARPIN-202ENST00000398712 C9orf163Q8N9P6 203 aa16.4■□□□□ 0.22
SHARPIN-202ENST00000398712 PLECQ15149 4684 aaKnown RBP16.4■□□□□ 0.22
SHARPIN-202ENST00000398712 REG3GQ6UW15 175 aa16.39■□□□□ 0.21
SHARPIN-202ENST00000398712 DNAH7Q8WXX0 4024 aa16.39■□□□□ 0.21
SHARPIN-202ENST00000398712 TRBV7-4A0A0J9YYF1 115 aa16.37■□□□□ 0.21
SHARPIN-202ENST00000398712 Q9BRP9 147 aa16.37■□□□□ 0.21
SHARPIN-202ENST00000398712 DNAH10Q8IVF4 4471 aa16.37■□□□□ 0.21
SHARPIN-202ENST00000398712 A0A1W2PNN7 141 aa16.36■□□□□ 0.21
SHARPIN-202ENST00000398712 M0R2N4 97 aa16.36■□□□□ 0.21
SHARPIN-202ENST00000398712 ANAPC13Q9BS18 74 aa16.35■□□□□ 0.21
SHARPIN-202ENST00000398712 UBL5Q9BZL1 73 aa16.33■□□□□ 0.21
SHARPIN-202ENST00000398712 DEFB105AQ8NG35 78 aa16.32■□□□□ 0.2
SHARPIN-202ENST00000398712 TENM2Q9NT68 2774 aa16.31■□□□□ 0.2
SHARPIN-202ENST00000398712 Q8N377 158 aa16.31■□□□□ 0.2
SHARPIN-202ENST00000398712 UBE2BP63146 152 aa16.31■□□□□ 0.2
SHARPIN-202ENST00000398712 LINC00474Q9P2X8 69 aa16.31■□□□□ 0.2
SHARPIN-202ENST00000398712 STARD9Q9P2P6 4700 aa16.3■□□□□ 0.2
SHARPIN-202ENST00000398712 CHTF8P0CG12 524 aa16.29■□□□□ 0.2
SHARPIN-202ENST00000398712 ATP5EP2Q5VTU8 51 aa16.29■□□□□ 0.2
SHARPIN-202ENST00000398712 IGKV3D-7A0A0C4DH55 119 aa16.28■□□□□ 0.2
SHARPIN-202ENST00000398712 LINC01547P58512 204 aaPredicted RBP16.28■□□□□ 0.2
SHARPIN-202ENST00000398712 Q6ZR54 194 aa16.26■□□□□ 0.19
SHARPIN-202ENST00000398712 IGLV5-48A0A075B6I7 105 aa16.26■□□□□ 0.19
SHARPIN-202ENST00000398712 VPS13DQ5THJ4 4388 aa16.25■□□□□ 0.19
SHARPIN-202ENST00000398712 FAM236AA0A1B0GUQ0 79 aa16.25■□□□□ 0.19
SHARPIN-202ENST00000398712 FAM236BA0A1B0GV22 79 aa16.25■□□□□ 0.19
SHARPIN-202ENST00000398712 A0A087WTM6 91 aa16.24■□□□□ 0.19
SHARPIN-202ENST00000398712 FAM19A1Q7Z5A9 133 aa16.23■□□□□ 0.19
SHARPIN-202ENST00000398712 ERC2-IT1O76042 136 aa16.22■□□□□ 0.19
SHARPIN-202ENST00000398712 PHF5AQ7RTV0 110 aaKnown RBP16.22■□□□□ 0.19
SHARPIN-202ENST00000398712 ST20-AS1Q8NBB2 130 aa16.22■□□□□ 0.19
SHARPIN-202ENST00000398712 Q6ZVQ6 151 aa16.17■□□□□ 0.18
SHARPIN-202ENST00000398712 PRLHP81277 87 aa16.15■□□□□ 0.18
SHARPIN-202ENST00000398712 C3orf22Q8N5N4 141 aa16.14■□□□□ 0.17
SHARPIN-202ENST00000398712 DPH3Q96FX2 82 aa16.13■□□□□ 0.17
SHARPIN-202ENST00000398712 TNP2Q05952 138 aa16.13■□□□□ 0.17
SHARPIN-202ENST00000398712 C1orf134Q5TEV5 83 aa16.13■□□□□ 0.17
SHARPIN-202ENST00000398712 SPACA4Q8TDM5 124 aa16.13■□□□□ 0.17
SHARPIN-202ENST00000398712 H0Y9J4 135 aa16.12■□□□□ 0.17
SHARPIN-202ENST00000398712 HIST1H4AP62805 103 aaKnown RBP16.12■□□□□ 0.17
SHARPIN-202ENST00000398712 PANO1I0J062 215 aa16.11■□□□□ 0.17
SHARPIN-202ENST00000398712 KRTAP11-1Q8IUC1 163 aa16.1■□□□□ 0.17
SHARPIN-202ENST00000398712 RTL8CO15255 209 aa16.1■□□□□ 0.17
SHARPIN-202ENST00000398712 LY6G6CO95867 125 aa16.1■□□□□ 0.17
SHARPIN-202ENST00000398712 HIGD2AQ9BW72 106 aa16.1■□□□□ 0.17
SHARPIN-202ENST00000398712 HAMPP81172 84 aa16.09■□□□□ 0.17
SHARPIN-202ENST00000398712 WWC2-AS2Q96NR7 200 aa16.09■□□□□ 0.17
SHARPIN-202ENST00000398712 A0A087WVE0 104 aa16.07■□□□□ 0.16
SHARPIN-202ENST00000398712 A0A1B0GW54 56 aa16.07■□□□□ 0.16
SHARPIN-202ENST00000398712 EPM2AB3EWF7 344 aa16.07■□□□□ 0.16
SHARPIN-202ENST00000398712 CXCL6P80162 114 aa16.07■□□□□ 0.16
SHARPIN-202ENST00000398712 C1orf137Q5JT78 98 aa16.07■□□□□ 0.16
SHARPIN-202ENST00000398712 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.07■□□□□ 0.16
SHARPIN-202ENST00000398712 F8WEM9 126 aa16.05■□□□□ 0.16
SHARPIN-202ENST00000398712 FUSP35637 526 aaKnown RBP eCLIP16.05■□□□□ 0.16
SHARPIN-202ENST00000398712 ATOX1O00244 68 aa16.05■□□□□ 0.16
SHARPIN-202ENST00000398712 UBE2AP49459 152 aa16.04■□□□□ 0.16
SHARPIN-202ENST00000398712 SMIM29Q86T20 159 aa16.04■□□□□ 0.16
SHARPIN-202ENST00000398712 LINC00476Q8WZB0 136 aa16.03■□□□□ 0.16
SHARPIN-202ENST00000398712 BCE1O60756 84 aa16.02■□□□□ 0.15
SHARPIN-202ENST00000398712 NREPQ16612 68 aa15.99■□□□□ 0.15
SHARPIN-202ENST00000398712 Q8NBF4 154 aa15.99■□□□□ 0.15
SHARPIN-202ENST00000398712 IGLV5-52A0A0A0MRZ9 124 aa15.98■□□□□ 0.15
SHARPIN-202ENST00000398712 A0A1W2PNM2 257 aa15.98■□□□□ 0.15
SHARPIN-202ENST00000398712 C3orf84H3BNL1 204 aa15.98■□□□□ 0.15
SHARPIN-202ENST00000398712 CCDC179H3BU77 68 aa15.98■□□□□ 0.15
SHARPIN-202ENST00000398712 SPRR1BP22528 89 aa15.94■□□□□ 0.14
SHARPIN-202ENST00000398712 SPRR4Q96PI1 79 aa15.94■□□□□ 0.14
SHARPIN-202ENST00000398712 IGLV8-61A0A075B6I0 122 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms