RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 Q6ZVQ6 151 aa15.61■□□□□ 0.09
PABPN1-202ENST00000397276 K7EIL1 84 aa15.6■□□□□ 0.09
PABPN1-202ENST00000397276 DNAH10OSP0CZ25 163 aa15.6■□□□□ 0.09
PABPN1-202ENST00000397276 HUWE1Q7Z6Z7 4374 aaKnown RBP15.6■□□□□ 0.09
PABPN1-202ENST00000397276 SCXQ7RTU7 201 aa15.59■□□□□ 0.09
PABPN1-202ENST00000397276 SNURFQ9Y675 71 aa15.59■□□□□ 0.09
PABPN1-202ENST00000397276 CASC10Q5T4H9 136 aa15.59■□□□□ 0.09
PABPN1-202ENST00000397276 COX7BP24311 80 aa15.58■□□□□ 0.09
PABPN1-202ENST00000397276 M0R378 163 aa15.58■□□□□ 0.08
PABPN1-202ENST00000397276 MGAM2Q2M2H8 2515 aa15.57■□□□□ 0.08
PABPN1-202ENST00000397276 H7BZZ5 65 aa15.57■□□□□ 0.08
PABPN1-202ENST00000397276 LOC110117498A0A087WWA1 95 aa15.56■□□□□ 0.08
PABPN1-202ENST00000397276 TM2D3Q9BRN9 247 aa15.56■□□□□ 0.08
PABPN1-202ENST00000397276 FAM236DA0A1B0GTK5 79 aa15.55■□□□□ 0.08
PABPN1-202ENST00000397276 FAM236CP0DP71 79 aa15.55■□□□□ 0.08
PABPN1-202ENST00000397276 ELOF1P60002 83 aaKnown RBP15.54■□□□□ 0.08
PABPN1-202ENST00000397276 RMI2Q96E14 147 aa15.54■□□□□ 0.08
PABPN1-202ENST00000397276 TRAV7A0A075B6U4 112 aa15.53■□□□□ 0.08
PABPN1-202ENST00000397276 SERTAD4-AS1Q5TG53 156 aa15.52■□□□□ 0.07
PABPN1-202ENST00000397276 LYSTQ99698 3801 aa15.51■□□□□ 0.07
PABPN1-202ENST00000397276 NKAPP1Q8N9T2 125 aa15.48■□□□□ 0.07
PABPN1-202ENST00000397276 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP15.47■□□□□ 0.07
PABPN1-202ENST00000397276 FAM168BA1KXE4 195 aa15.46■□□□□ 0.06
PABPN1-202ENST00000397276 DNAH1Q9P2D7 4330 aa15.45■□□□□ 0.06
PABPN1-202ENST00000397276 LINC00528Q8N1L1 170 aa15.44■□□□□ 0.06
PABPN1-202ENST00000397276 F8WEM9 126 aa15.44■□□□□ 0.06
PABPN1-202ENST00000397276 C7orf33Q8WU49 177 aa15.44■□□□□ 0.06
PABPN1-202ENST00000397276 RPL37AP8A6NKH3 93 aa15.43■□□□□ 0.06
PABPN1-202ENST00000397276 TRBV7-6A0A0J9YX20 115 aa15.42■□□□□ 0.06
PABPN1-202ENST00000397276 F8WDY8 70 aa15.42■□□□□ 0.06
PABPN1-202ENST00000397276 KLKP1Q107X0 134 aa15.42■□□□□ 0.06
PABPN1-202ENST00000397276 Q8N9L7 120 aa15.41■□□□□ 0.06
PABPN1-202ENST00000397276 CXCL6P80162 114 aa15.4■□□□□ 0.06
PABPN1-202ENST00000397276 COL7A1Q02388 2944 aa15.4■□□□□ 0.06
PABPN1-202ENST00000397276 TRBV7-4A0A0J9YYF1 115 aa15.4■□□□□ 0.06
PABPN1-202ENST00000397276 DEFB105AQ8NG35 78 aa15.38■□□□□ 0.05
PABPN1-202ENST00000397276 SERP1Q9Y6X1 66 aa15.38■□□□□ 0.05
PABPN1-202ENST00000397276 STAB2Q8WWQ8 2551 aa15.38■□□□□ 0.05
PABPN1-202ENST00000397276 EPM2AB3EWF7 344 aa15.37■□□□□ 0.05
PABPN1-202ENST00000397276 DNAH10Q8IVF4 4471 aa15.36■□□□□ 0.05
PABPN1-202ENST00000397276 BCE1O60756 84 aa15.36■□□□□ 0.05
PABPN1-202ENST00000397276 KCNQ1DNQ9H478 68 aa15.36■□□□□ 0.05
PABPN1-202ENST00000397276 H3BQ85 93 aa15.36■□□□□ 0.05
PABPN1-202ENST00000397276 PDE6GP18545 87 aa15.35■□□□□ 0.05
PABPN1-202ENST00000397276 TLX1NBP0CAT3 122 aa15.35■□□□□ 0.05
PABPN1-202ENST00000397276 FP248Q71RG6 208 aaPredicted RBP15.31■□□□□ 0.04
PABPN1-202ENST00000397276 KRTAP7-1Q8IUC3 87 aa15.31■□□□□ 0.04
PABPN1-202ENST00000397276 KRTAP1-5Q9BYS1 174 aa15.31■□□□□ 0.04
PABPN1-202ENST00000397276 LINC00336Q6ZUF6 198 aa15.3■□□□□ 0.04
PABPN1-202ENST00000397276 LINC00474Q9P2X8 69 aa15.3■□□□□ 0.04
PABPN1-202ENST00000397276 NREPQ16612 68 aa15.29■□□□□ 0.04
PABPN1-202ENST00000397276 BPY2O14599 106 aa15.28■□□□□ 0.04
PABPN1-202ENST00000397276 IGLV1-50A0A075B6I6 118 aa15.27■□□□□ 0.03
PABPN1-202ENST00000397276 DNAH9Q9NYC9 4486 aa15.27■□□□□ 0.03
PABPN1-202ENST00000397276 MDFIQ99750 246 aa15.26■□□□□ 0.03
PABPN1-202ENST00000397276 PLA2G2DQ9UNK4 145 aa15.25■□□□□ 0.03
PABPN1-202ENST00000397276 CSMD3Q7Z407 3707 aa15.25■□□□□ 0.03
PABPN1-202ENST00000397276 TENM2Q9NT68 2774 aa15.24■□□□□ 0.03
PABPN1-202ENST00000397276 UBE2DNLQ8IWF7 75 aa15.24■□□□□ 0.03
PABPN1-202ENST00000397276 ETDCA0A1B0GVM5 59 aa15.24■□□□□ 0.03
PABPN1-202ENST00000397276 C3orf84H3BNL1 204 aa15.24■□□□□ 0.03
PABPN1-202ENST00000397276 Q8N377 158 aa15.24■□□□□ 0.03
PABPN1-202ENST00000397276 Q9BRP9 147 aa15.24■□□□□ 0.03
PABPN1-202ENST00000397276 TMEM254Q8TBM7 123 aa15.23■□□□□ 0.03
PABPN1-202ENST00000397276 PSCAO43653 123 aa15.23■□□□□ 0.03
PABPN1-202ENST00000397276 Q6ZRX8 168 aa15.23■□□□□ 0.03
PABPN1-202ENST00000397276 MRPL55Q7Z7F7 128 aaKnown RBP15.23■□□□□ 0.03
PABPN1-202ENST00000397276 IGKV2-24A0A0C4DH68 120 aa15.22■□□□□ 0.03
PABPN1-202ENST00000397276 IGKV4-1P06312 121 aa15.21■□□□□ 0.03
PABPN1-202ENST00000397276 ST20-AS1Q8NBB2 130 aa15.21■□□□□ 0.03
PABPN1-202ENST00000397276 DNAH7Q8WXX0 4024 aa15.2■□□□□ 0.02
PABPN1-202ENST00000397276 KRTAP4-16G5E9R7 235 aaPredicted RBP15.19■□□□□ 0.02
PABPN1-202ENST00000397276 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.19■□□□□ 0.02
PABPN1-202ENST00000397276 IGLV5-37A0A075B6J1 123 aa15.19■□□□□ 0.02
PABPN1-202ENST00000397276 SMIM26A0A096LP01 95 aa15.18■□□□□ 0.02
PABPN1-202ENST00000397276 PRYO14603 147 aa15.18■□□□□ 0.02
PABPN1-202ENST00000397276 FAM229BQ4G0N7 80 aa15.17■□□□□ 0.02
PABPN1-202ENST00000397276 DHRS4-AS1Q9P1J3 65 aa15.17■□□□□ 0.02
PABPN1-202ENST00000397276 ERC2-IT1O76042 136 aa15.15■□□□□ 0.02
PABPN1-202ENST00000397276 APLNQ9ULZ1 77 aa15.15■□□□□ 0.02
PABPN1-202ENST00000397276 A0A096LNI7 61 aa15.15■□□□□ 0.02
PABPN1-202ENST00000397276 SPRR1AP35321 89 aa15.15■□□□□ 0.02
PABPN1-202ENST00000397276 UBE2BP63146 152 aa15.15■□□□□ 0.02
PABPN1-202ENST00000397276 NDUFC1O43677 76 aa15.13■□□□□ 0.01
PABPN1-202ENST00000397276 OCR1Q9BZK8 76 aa15.13■□□□□ 0.01
PABPN1-202ENST00000397276 HIGD2AQ9BW72 106 aa15.11■□□□□ 0.01
PABPN1-202ENST00000397276 A0A1W2PNN7 141 aa15.1■□□□□ 0.01
PABPN1-202ENST00000397276 REG3GQ6UW15 175 aa15.1■□□□□ 0.01
PABPN1-202ENST00000397276 MPLKIPQ8TAP9 179 aa15.09■□□□□ 0.01
PABPN1-202ENST00000397276 PRO0628Q9UI54 55 aa15.09■□□□□ 0.01
PABPN1-202ENST00000397276 PLECQ15149 4684 aaKnown RBP15.07■□□□□ 0
PABPN1-202ENST00000397276 A0A0U1RQV1 116 aa15.07■□□□□ 0
PABPN1-202ENST00000397276 IGLV5-48A0A075B6I7 105 aa15.06■□□□□ 0
PABPN1-202ENST00000397276 B9D2Q9BPU9 175 aa15.06■□□□□ 0
PABPN1-202ENST00000397276 C16orf90A8MZG2 172 aa15.06■□□□□ 0
PABPN1-202ENST00000397276 CHTF8P0CG12 524 aa15.06■□□□□ 0
PABPN1-202ENST00000397276 FAM30AQ9NZY2 134 aa15.04■□□□□ -0
PABPN1-202ENST00000397276 PRLHP81277 87 aa15.04■□□□□ -0
PABPN1-202ENST00000397276 CNBPP62633 177 aaKnown RBP15.03■□□□□ -0
PABPN1-202ENST00000397276 C1orf137Q5JT78 98 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms