RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 ERC2-IT1O76042 136 aa8.79□□□□□ -1
TRIM40-207ENST00000396581 HTN3P15516 51 aa8.79□□□□□ -1
TRIM40-207ENST00000396581 CAMK2N2Q96S95 79 aa8.79□□□□□ -1
TRIM40-207ENST00000396581 TM2D3Q9BRN9 247 aa8.79□□□□□ -1
TRIM40-207ENST00000396581 MDFIQ99750 246 aa8.78□□□□□ -1
TRIM40-207ENST00000396581 SNURFQ9Y675 71 aa8.78□□□□□ -1
TRIM40-207ENST00000396581 DNAH3Q8TD57 4116 aa8.77□□□□□ -1
TRIM40-207ENST00000396581 F8WEM9 126 aa8.77□□□□□ -1.01
TRIM40-207ENST00000396581 H3BNG1 76 aa8.77□□□□□ -1.01
TRIM40-207ENST00000396581 Q6ZRU5 148 aa8.77□□□□□ -1.01
TRIM40-207ENST00000396581 SCXQ7RTU7 201 aa8.76□□□□□ -1.01
TRIM40-207ENST00000396581 ATP5EP56381 51 aaPredicted RBP8.76□□□□□ -1.01
TRIM40-207ENST00000396581 NREPQ16612 68 aa8.76□□□□□ -1.01
TRIM40-207ENST00000396581 HIGD2BQ4VC39 106 aa8.76□□□□□ -1.01
TRIM40-207ENST00000396581 C15orf56Q8N910 161 aa8.76□□□□□ -1.01
TRIM40-207ENST00000396581 F8WDY8 70 aa8.75□□□□□ -1.01
TRIM40-207ENST00000396581 BPY2O14599 106 aa8.74□□□□□ -1.01
TRIM40-207ENST00000396581 IGKV4-1P06312 121 aa8.74□□□□□ -1.01
TRIM40-207ENST00000396581 TENM3Q9P273 2699 aa8.74□□□□□ -1.01
TRIM40-207ENST00000396581 KPRPQ5T749 579 aaPredicted RBP8.74□□□□□ -1.01
TRIM40-207ENST00000396581 WFDC10BQ8IUB3 73 aa8.74□□□□□ -1.01
TRIM40-207ENST00000396581 RETNQ9HD89 108 aa8.74□□□□□ -1.01
TRIM40-207ENST00000396581 SMIM26A0A096LP01 95 aa8.72□□□□□ -1.01
TRIM40-207ENST00000396581 TMEM254Q8TBM7 123 aa8.72□□□□□ -1.01
TRIM40-207ENST00000396581 KCNQ1DNQ9H478 68 aa8.72□□□□□ -1.01
TRIM40-207ENST00000396581 Q6ZRP5 223 aa8.71□□□□□ -1.01
TRIM40-207ENST00000396581 OCR1Q9BZK8 76 aa8.71□□□□□ -1.01
TRIM40-207ENST00000396581 IGLV5-48A0A075B6I7 105 aa8.71□□□□□ -1.02
TRIM40-207ENST00000396581 FP248Q71RG6 208 aaPredicted RBP8.7□□□□□ -1.02
TRIM40-207ENST00000396581 A0A1B0GW54 56 aa8.69□□□□□ -1.02
TRIM40-207ENST00000396581 K7EIL1 84 aa8.69□□□□□ -1.02
TRIM40-207ENST00000396581 PRB2P02812 416 aaPredicted RBP8.69□□□□□ -1.02
TRIM40-207ENST00000396581 A0A0U1RQV1 116 aa8.69□□□□□ -1.02
TRIM40-207ENST00000396581 Q8N377 158 aa8.68□□□□□ -1.02
TRIM40-207ENST00000396581 Q8N9L7 120 aa8.68□□□□□ -1.02
TRIM40-207ENST00000396581 MRAPQ8TCY5 172 aa8.67□□□□□ -1.02
TRIM40-207ENST00000396581 PLA2G2DQ9UNK4 145 aa8.66□□□□□ -1.02
TRIM40-207ENST00000396581 SYCNQ0VAF6 134 aa8.65□□□□□ -1.02
TRIM40-207ENST00000396581 LINC01556Q5JQF7 62 aa8.65□□□□□ -1.02
TRIM40-207ENST00000396581 C1orf43Q9BWL3 253 aa8.65□□□□□ -1.02
TRIM40-207ENST00000396581 TLX1NBP0CAT3 122 aa8.65□□□□□ -1.03
TRIM40-207ENST00000396581 TNP2Q05952 138 aa8.65□□□□□ -1.03
TRIM40-207ENST00000396581 ESRGQ1W209 222 aa8.65□□□□□ -1.03
TRIM40-207ENST00000396581 Q6ZTC4 211 aa8.65□□□□□ -1.03
TRIM40-207ENST00000396581 C7orf33Q8WU49 177 aa8.65□□□□□ -1.03
TRIM40-207ENST00000396581 KRTAP4-16G5E9R7 235 aaPredicted RBP8.64□□□□□ -1.03
TRIM40-207ENST00000396581 PRYO14603 147 aa8.64□□□□□ -1.03
TRIM40-207ENST00000396581 SERTAD4-AS1Q5TG53 156 aa8.64□□□□□ -1.03
TRIM40-207ENST00000396581 C11orf45Q8TAV5 145 aa8.63□□□□□ -1.03
TRIM40-207ENST00000396581 DHRS4-AS1Q9P1J3 65 aa8.63□□□□□ -1.03
TRIM40-207ENST00000396581 C3orf84H3BNL1 204 aa8.63□□□□□ -1.03
TRIM40-207ENST00000396581 LINC00336Q6ZUF6 198 aa8.63□□□□□ -1.03
TRIM40-207ENST00000396581 NKAPP1Q8N9T2 125 aa8.63□□□□□ -1.03
TRIM40-207ENST00000396581 IGLV5-37A0A075B6J1 123 aa8.62□□□□□ -1.03
TRIM40-207ENST00000396581 LCE6AA0A183 80 aa8.62□□□□□ -1.03
TRIM40-207ENST00000396581 SPRR1AP35321 89 aa8.62□□□□□ -1.03
TRIM40-207ENST00000396581 Q6ZRX8 168 aa8.61□□□□□ -1.03
TRIM40-207ENST00000396581 PRO0628Q9UI54 55 aa8.61□□□□□ -1.03
TRIM40-207ENST00000396581 A0A1W2PNM2 257 aa8.61□□□□□ -1.03
TRIM40-207ENST00000396581 FUSP35637 526 aaKnown RBP eCLIP8.6□□□□□ -1.03
TRIM40-207ENST00000396581 Q9BRP9 147 aa8.6□□□□□ -1.03
TRIM40-207ENST00000396581 LINC00474Q9P2X8 69 aa8.6□□□□□ -1.03
TRIM40-207ENST00000396581 IGKV2D-24A0A075B6R9 120 aa8.59□□□□□ -1.03
TRIM40-207ENST00000396581 DEFB105AQ8NG35 78 aa8.59□□□□□ -1.03
TRIM40-207ENST00000396581 SPRR4Q96PI1 79 aa8.59□□□□□ -1.03
TRIM40-207ENST00000396581 IGLV1-50A0A075B6I6 118 aa8.58□□□□□ -1.04
TRIM40-207ENST00000396581 DEFB131BA0A096LNP1 70 aa8.58□□□□□ -1.04
TRIM40-207ENST00000396581 STAB2Q8WWQ8 2551 aa8.58□□□□□ -1.04
TRIM40-207ENST00000396581 Q8NBF4 154 aa8.58□□□□□ -1.04
TRIM40-207ENST00000396581 DNAH10OSP0CZ25 163 aa8.57□□□□□ -1.04
TRIM40-207ENST00000396581 C1orf137Q5JT78 98 aa8.57□□□□□ -1.04
TRIM40-207ENST00000396581 HIGD2AQ9BW72 106 aa8.57□□□□□ -1.04
TRIM40-207ENST00000396581 SMIM29Q86T20 159 aa8.56□□□□□ -1.04
TRIM40-207ENST00000396581 FAM229BQ4G0N7 80 aa8.55□□□□□ -1.04
TRIM40-207ENST00000396581 KRTAP7-1Q8IUC3 87 aa8.55□□□□□ -1.04
TRIM40-207ENST00000396581 HUWE1Q7Z6Z7 4374 aaKnown RBP8.54□□□□□ -1.04
TRIM40-207ENST00000396581 DSCR10P59022 87 aa8.53□□□□□ -1.04
TRIM40-207ENST00000396581 ZCCHC13Q8WW36 166 aaKnown RBP8.53□□□□□ -1.04
TRIM40-207ENST00000396581 ETDCA0A1B0GVM5 59 aa8.53□□□□□ -1.04
TRIM40-207ENST00000396581 B9D2Q9BPU9 175 aa8.53□□□□□ -1.04
TRIM40-207ENST00000396581 COL7A1Q02388 2944 aa8.53□□□□□ -1.04
TRIM40-207ENST00000396581 RPL37AP8A6NKH3 93 aa8.52□□□□□ -1.05
TRIM40-207ENST00000396581 ST20-AS1Q8NBB2 130 aa8.52□□□□□ -1.05
TRIM40-207ENST00000396581 FAM168BA1KXE4 195 aa8.52□□□□□ -1.05
TRIM40-207ENST00000396581 FAM30AQ9NZY2 134 aa8.52□□□□□ -1.05
TRIM40-207ENST00000396581 MRPL55Q7Z7F7 128 aaKnown RBP8.49□□□□□ -1.05
TRIM40-207ENST00000396581 hDV103S1A0JD37 113 aa8.47□□□□□ -1.05
TRIM40-207ENST00000396581 K7EQZ3 153 aa8.47□□□□□ -1.05
TRIM40-207ENST00000396581 KRTAP21-3Q3LHN1 58 aa8.47□□□□□ -1.05
TRIM40-207ENST00000396581 DNAH9Q9NYC9 4486 aa8.46□□□□□ -1.05
TRIM40-207ENST00000396581 CASC10Q5T4H9 136 aa8.45□□□□□ -1.06
TRIM40-207ENST00000396581 DNHD1Q96M86 4753 aa8.45□□□□□ -1.06
TRIM40-207ENST00000396581 LINC00476Q8WZB0 136 aa8.44□□□□□ -1.06
TRIM40-207ENST00000396581 HCG22E2RYF7 251 aa8.44□□□□□ -1.06
TRIM40-207ENST00000396581 MPLKIPQ8TAP9 179 aa8.44□□□□□ -1.06
TRIM40-207ENST00000396581 LINC00588Q9Y4M8 146 aa8.44□□□□□ -1.06
TRIM40-207ENST00000396581 IGLV8-61A0A075B6I0 122 aa8.43□□□□□ -1.06
TRIM40-207ENST00000396581 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.43□□□□□ -1.06
TRIM40-207ENST00000396581 UBE2BP63146 152 aa8.43□□□□□ -1.06
TRIM40-207ENST00000396581 REG3GQ6UW15 175 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms