RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 RBM3P98179 157 aaKnown RBP9.62□□□□□ -0.87
CBX3-202ENST00000396386 FAM19A5Q7Z5A7 132 aaPredicted RBP9.62□□□□□ -0.87
CBX3-202ENST00000396386 NBDYA0A0U1RRE5 68 aa9.62□□□□□ -0.87
CBX3-202ENST00000396386 DYNC2H1Q8NCM8 4307 aaKnown RBP9.61□□□□□ -0.87
CBX3-202ENST00000396386 IGLV1-50A0A075B6I6 118 aa9.61□□□□□ -0.87
CBX3-202ENST00000396386 LOC110117498A0A087WWA1 95 aa9.61□□□□□ -0.87
CBX3-202ENST00000396386 KRTAP7-1Q8IUC3 87 aa9.61□□□□□ -0.87
CBX3-202ENST00000396386 IMUPQ9GZP8 106 aa9.61□□□□□ -0.87
CBX3-202ENST00000396386 LINC00846Q9NV44 126 aa9.61□□□□□ -0.87
CBX3-202ENST00000396386 RPL37AP8A6NKH3 93 aa9.6□□□□□ -0.87
CBX3-202ENST00000396386 MRPL55Q7Z7F7 128 aaKnown RBP9.6□□□□□ -0.87
CBX3-202ENST00000396386 Q6ZQT0 140 aa9.59□□□□□ -0.87
CBX3-202ENST00000396386 A0A096LNI7 61 aa9.58□□□□□ -0.88
CBX3-202ENST00000396386 C16orf90A8MZG2 172 aa9.58□□□□□ -0.88
CBX3-202ENST00000396386 DSCR8Q96T75 97 aa9.58□□□□□ -0.88
CBX3-202ENST00000396386 ETDCA0A1B0GVM5 59 aa9.57□□□□□ -0.88
CBX3-202ENST00000396386 SPRR1AP35321 89 aa9.57□□□□□ -0.88
CBX3-202ENST00000396386 Q6JHZ5 121 aa9.57□□□□□ -0.88
CBX3-202ENST00000396386 Q6ZRX8 168 aa9.57□□□□□ -0.88
CBX3-202ENST00000396386 KMT2CQ8NEZ4 4911 aaKnown RBP9.57□□□□□ -0.88
CBX3-202ENST00000396386 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.57□□□□□ -0.88
CBX3-202ENST00000396386 KRTAP4-16G5E9R7 235 aaPredicted RBP9.57□□□□□ -0.88
CBX3-202ENST00000396386 PDE6GP18545 87 aa9.57□□□□□ -0.88
CBX3-202ENST00000396386 NDUFV3P56181 108 aaKnown RBP9.57□□□□□ -0.88
CBX3-202ENST00000396386 DHRS4-AS1Q9P1J3 65 aa9.57□□□□□ -0.88
CBX3-202ENST00000396386 B5MCH6 92 aa9.56□□□□□ -0.88
CBX3-202ENST00000396386 ANAPC13Q9BS18 74 aa9.56□□□□□ -0.88
CBX3-202ENST00000396386 IGKV2-24A0A0C4DH68 120 aa9.55□□□□□ -0.88
CBX3-202ENST00000396386 PKIGQ9Y2B9 76 aa9.55□□□□□ -0.88
CBX3-202ENST00000396386 LRCOL1A6NCL2 159 aa9.54□□□□□ -0.88
CBX3-202ENST00000396386 Q6ZRN7 208 aaPredicted RBP9.53□□□□□ -0.88
CBX3-202ENST00000396386 TRBV7-4A0A0J9YYF1 115 aa9.53□□□□□ -0.88
CBX3-202ENST00000396386 REG3GQ6UW15 175 aa9.52□□□□□ -0.89
CBX3-202ENST00000396386 Q9BRP9 147 aa9.51□□□□□ -0.89
CBX3-202ENST00000396386 IGKV3D-7A0A0C4DH55 119 aa9.51□□□□□ -0.89
CBX3-202ENST00000396386 ATP5EP2Q5VTU8 51 aa9.51□□□□□ -0.89
CBX3-202ENST00000396386 UBL5Q9BZL1 73 aa9.51□□□□□ -0.89
CBX3-202ENST00000396386 FAM236AA0A1B0GUQ0 79 aa9.5□□□□□ -0.89
CBX3-202ENST00000396386 FAM236BA0A1B0GV22 79 aa9.5□□□□□ -0.89
CBX3-202ENST00000396386 C9orf163Q8N9P6 203 aa9.5□□□□□ -0.89
CBX3-202ENST00000396386 LYSTQ99698 3801 aa9.5□□□□□ -0.89
CBX3-202ENST00000396386 CSMD3Q7Z407 3707 aa9.49□□□□□ -0.89
CBX3-202ENST00000396386 A0A1W2PNN7 141 aa9.49□□□□□ -0.89
CBX3-202ENST00000396386 DEFB105AQ8NG35 78 aa9.49□□□□□ -0.89
CBX3-202ENST00000396386 M0R2N4 97 aa9.48□□□□□ -0.89
CBX3-202ENST00000396386 Q8N377 158 aa9.48□□□□□ -0.89
CBX3-202ENST00000396386 RYR3Q15413 4870 aa9.48□□□□□ -0.89
CBX3-202ENST00000396386 LINC01547P58512 204 aaPredicted RBP9.47□□□□□ -0.89
CBX3-202ENST00000396386 UBE2BP63146 152 aa9.47□□□□□ -0.89
CBX3-202ENST00000396386 CHTF8P0CG12 524 aa9.47□□□□□ -0.89
CBX3-202ENST00000396386 IGLV5-48A0A075B6I7 105 aa9.45□□□□□ -0.9
CBX3-202ENST00000396386 LINC00474Q9P2X8 69 aa9.45□□□□□ -0.9
CBX3-202ENST00000396386 DNAH10Q8IVF4 4471 aa9.44□□□□□ -0.9
CBX3-202ENST00000396386 ST20-AS1Q8NBB2 130 aa9.44□□□□□ -0.9
CBX3-202ENST00000396386 PLECQ15149 4684 aaKnown RBP9.44□□□□□ -0.9
CBX3-202ENST00000396386 DNAH7Q8WXX0 4024 aa9.43□□□□□ -0.9
CBX3-202ENST00000396386 ERC2-IT1O76042 136 aa9.42□□□□□ -0.9
CBX3-202ENST00000396386 Q6ZVQ6 151 aa9.42□□□□□ -0.9
CBX3-202ENST00000396386 FAM19A1Q7Z5A9 133 aa9.42□□□□□ -0.9
CBX3-202ENST00000396386 PHF5AQ7RTV0 110 aaKnown RBP9.42□□□□□ -0.9
CBX3-202ENST00000396386 A0A087WTM6 91 aa9.41□□□□□ -0.9
CBX3-202ENST00000396386 HIST1H4AP62805 103 aaKnown RBP9.41□□□□□ -0.9
CBX3-202ENST00000396386 Q6ZR54 194 aa9.41□□□□□ -0.9
CBX3-202ENST00000396386 STARD9Q9P2P6 4700 aa9.4□□□□□ -0.9
CBX3-202ENST00000396386 PRLHP81277 87 aa9.4□□□□□ -0.91
CBX3-202ENST00000396386 C3orf22Q8N5N4 141 aa9.4□□□□□ -0.91
CBX3-202ENST00000396386 A0A087WVE0 104 aa9.38□□□□□ -0.91
CBX3-202ENST00000396386 TNP2Q05952 138 aa9.38□□□□□ -0.91
CBX3-202ENST00000396386 TENM2Q9NT68 2774 aa9.38□□□□□ -0.91
CBX3-202ENST00000396386 VPS13DQ5THJ4 4388 aa9.37□□□□□ -0.91
CBX3-202ENST00000396386 ATOX1O00244 68 aa9.37□□□□□ -0.91
CBX3-202ENST00000396386 HAMPP81172 84 aa9.36□□□□□ -0.91
CBX3-202ENST00000396386 PANO1I0J062 215 aa9.36□□□□□ -0.91
CBX3-202ENST00000396386 KRTAP11-1Q8IUC1 163 aa9.36□□□□□ -0.91
CBX3-202ENST00000396386 SPACA4Q8TDM5 124 aa9.36□□□□□ -0.91
CBX3-202ENST00000396386 CCDC179H3BU77 68 aa9.35□□□□□ -0.91
CBX3-202ENST00000396386 CXCL6P80162 114 aa9.35□□□□□ -0.91
CBX3-202ENST00000396386 HIGD2AQ9BW72 106 aa9.35□□□□□ -0.91
CBX3-202ENST00000396386 H0Y9J4 135 aa9.34□□□□□ -0.91
CBX3-202ENST00000396386 FUSP35637 526 aaKnown RBP eCLIP9.34□□□□□ -0.91
CBX3-202ENST00000396386 C1orf137Q5JT78 98 aa9.34□□□□□ -0.91
CBX3-202ENST00000396386 F8WEM9 126 aa9.34□□□□□ -0.91
CBX3-202ENST00000396386 RTL8CO15255 209 aa9.34□□□□□ -0.91
CBX3-202ENST00000396386 DPH3Q96FX2 82 aa9.33□□□□□ -0.92
CBX3-202ENST00000396386 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.33□□□□□ -0.92
CBX3-202ENST00000396386 A0A1B0GW54 56 aa9.32□□□□□ -0.92
CBX3-202ENST00000396386 EPM2AB3EWF7 344 aa9.32□□□□□ -0.92
CBX3-202ENST00000396386 C1orf134Q5TEV5 83 aa9.32□□□□□ -0.92
CBX3-202ENST00000396386 SMIM29Q86T20 159 aa9.32□□□□□ -0.92
CBX3-202ENST00000396386 LY6G6CO95867 125 aa9.32□□□□□ -0.92
CBX3-202ENST00000396386 UBE2AP49459 152 aa9.32□□□□□ -0.92
CBX3-202ENST00000396386 C3orf84H3BNL1 204 aa9.31□□□□□ -0.92
CBX3-202ENST00000396386 Q8NBF4 154 aa9.31□□□□□ -0.92
CBX3-202ENST00000396386 A0A1W2PNM2 257 aa9.3□□□□□ -0.92
CBX3-202ENST00000396386 BCE1O60756 84 aa9.3□□□□□ -0.92
CBX3-202ENST00000396386 NREPQ16612 68 aa9.3□□□□□ -0.92
CBX3-202ENST00000396386 LINC00476Q8WZB0 136 aa9.29□□□□□ -0.92
CBX3-202ENST00000396386 WWC2-AS2Q96NR7 200 aa9.29□□□□□ -0.92
CBX3-202ENST00000396386 SCXQ7RTU7 201 aa9.28□□□□□ -0.92
CBX3-202ENST00000396386 UQCRQO14949 82 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms