RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 OR13C6PQ8NH95 151 aa9.25□□□□□ -0.93
DDR1-229ENST00000396342 ERC2-IT1O76042 136 aa9.24□□□□□ -0.93
DDR1-229ENST00000396342 NPC2P61916 151 aa9.24□□□□□ -0.93
DDR1-229ENST00000396342 PMCHL2Q9BQD1 86 aa9.24□□□□□ -0.93
DDR1-229ENST00000396342 LCE2AQ5TA79 106 aaPredicted RBP9.23□□□□□ -0.93
DDR1-229ENST00000396342 Q9BRP9 147 aa9.23□□□□□ -0.93
DDR1-229ENST00000396342 SLC7A5P1Q8MH63 180 aa9.22□□□□□ -0.93
DDR1-229ENST00000396342 LIMD2Q9BT23 127 aa9.22□□□□□ -0.93
DDR1-229ENST00000396342 Q8N377 158 aa9.21□□□□□ -0.94
DDR1-229ENST00000396342 DHRS4-AS1Q9P1J3 65 aa9.21□□□□□ -0.94
DDR1-229ENST00000396342 A0A0J9YXY3 114 aa9.2□□□□□ -0.94
DDR1-229ENST00000396342 LAMTOR3Q9UHA4 124 aa9.2□□□□□ -0.94
DDR1-229ENST00000396342 E9PLD3 99 aa9.19□□□□□ -0.94
DDR1-229ENST00000396342 SPANXCQ9NY87 97 aa9.19□□□□□ -0.94
DDR1-229ENST00000396342 LINC00518Q8N0U6 118 aa9.17□□□□□ -0.94
DDR1-229ENST00000396342 COPS9Q8WXC6 57 aa9.17□□□□□ -0.94
DDR1-229ENST00000396342 SPANXDQ9BXN6 97 aa9.16□□□□□ -0.94
DDR1-229ENST00000396342 TIMM17BO60830 172 aa9.15□□□□□ -0.94
DDR1-229ENST00000396342 TAL2Q16559 108 aa9.15□□□□□ -0.94
DDR1-229ENST00000396342 ADAMTSL4-AS1Q5T5F5 129 aa9.15□□□□□ -0.94
DDR1-229ENST00000396342 LINC00308Q8TCZ7 52 aa9.15□□□□□ -0.94
DDR1-229ENST00000396342 LINC00310P59036 64 aa9.14□□□□□ -0.95
DDR1-229ENST00000396342 ST20-AS1Q8NBB2 130 aa9.14□□□□□ -0.95
DDR1-229ENST00000396342 FAT4Q6V0I7 4981 aa9.14□□□□□ -0.95
DDR1-229ENST00000396342 ZNF815PA8K554 130 aa9.13□□□□□ -0.95
DDR1-229ENST00000396342 SYS1-DBNDD2H3BUS1 97 aa9.13□□□□□ -0.95
DDR1-229ENST00000396342 COX7BP24311 80 aa9.13□□□□□ -0.95
DDR1-229ENST00000396342 HRCT1Q6UXD1 115 aa9.12□□□□□ -0.95
DDR1-229ENST00000396342 SOSTDC1Q6X4U4 206 aa9.12□□□□□ -0.95
DDR1-229ENST00000396342 PET117Q6UWS5 81 aa9.11□□□□□ -0.95
DDR1-229ENST00000396342 XP32Q5T750 250 aa9.1□□□□□ -0.95
DDR1-229ENST00000396342 SCGB1D4Q6XE38 83 aa9.1□□□□□ -0.95
DDR1-229ENST00000396342 COLCA2A8K830 154 aa9.09□□□□□ -0.95
DDR1-229ENST00000396342 DEFB105AQ8NG35 78 aa9.09□□□□□ -0.95
DDR1-229ENST00000396342 PRO1933Q9H354 126 aa9.09□□□□□ -0.95
DDR1-229ENST00000396342 MUC17Q685J3 4493 aa9.08□□□□□ -0.96
DDR1-229ENST00000396342 C20orf202A1L168 122 aa9.08□□□□□ -0.96
DDR1-229ENST00000396342 SPRR1BP22528 89 aa9.08□□□□□ -0.96
DDR1-229ENST00000396342 H7C2G1 150 aa9.07□□□□□ -0.96
DDR1-229ENST00000396342 C6orf99Q4VX62 202 aa9.07□□□□□ -0.96
DDR1-229ENST00000396342 TEX49A0A1B0GTD5 131 aa9.06□□□□□ -0.96
DDR1-229ENST00000396342 EIF4EBP3O60516 100 aaPredicted RBP9.06□□□□□ -0.96
DDR1-229ENST00000396342 ELOF1P60002 83 aaKnown RBP9.06□□□□□ -0.96
DDR1-229ENST00000396342 LINC01545Q5VT33 79 aa9.06□□□□□ -0.96
DDR1-229ENST00000396342 AKR1D1P51857 326 aa9.05□□□□□ -0.96
DDR1-229ENST00000396342 CD164Q04900 197 aa9.05□□□□□ -0.96
DDR1-229ENST00000396342 Q1RN00 199 aa9.05□□□□□ -0.96
DDR1-229ENST00000396342 TRBV7-6A0A0J9YX20 115 aa9.04□□□□□ -0.96
DDR1-229ENST00000396342 KRTAP9-6A0A140TA67 174 aa9.04□□□□□ -0.96
DDR1-229ENST00000396342 A6NDN8 102 aa9.04□□□□□ -0.96
DDR1-229ENST00000396342 LITAFQ99732 161 aa9.04□□□□□ -0.96
DDR1-229ENST00000396342 NHP2Q9NX24 153 aaKnown RBP9.04□□□□□ -0.96
DDR1-229ENST00000396342 A0A1B0GWB2 263 aa9.03□□□□□ -0.96
DDR1-229ENST00000396342 IFITM1P13164 125 aa9.03□□□□□ -0.96
DDR1-229ENST00000396342 A4D1N5 150 aa9.02□□□□□ -0.97
DDR1-229ENST00000396342 C9orf92A6NGG3 77 aa9.02□□□□□ -0.97
DDR1-229ENST00000396342 HIST1H2BKO60814 126 aa9.02□□□□□ -0.97
DDR1-229ENST00000396342 HIST1H2BJP06899 126 aa9.02□□□□□ -0.97
DDR1-229ENST00000396342 HIST1H2BOP23527 126 aa9.02□□□□□ -0.97
DDR1-229ENST00000396342 HIST1H2BBP33778 126 aa9.02□□□□□ -0.97
DDR1-229ENST00000396342 HIST1H2BDP58876 126 aa9.02□□□□□ -0.97
DDR1-229ENST00000396342 KRTDAPP60985 99 aa9.02□□□□□ -0.97
DDR1-229ENST00000396342 HIST1H2BCP62807 126 aa9.02□□□□□ -0.97
DDR1-229ENST00000396342 HIST2H2BEQ16778 126 aa9.02□□□□□ -0.97
DDR1-229ENST00000396342 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.02□□□□□ -0.97
DDR1-229ENST00000396342 Q6ZVH6 145 aa9.02□□□□□ -0.97
DDR1-229ENST00000396342 HIST1H2BHQ93079 126 aa9.02□□□□□ -0.97
DDR1-229ENST00000396342 HIST1H2BNQ99877 126 aa9.02□□□□□ -0.97
DDR1-229ENST00000396342 HIST1H2BMQ99879 126 aa9.02□□□□□ -0.97
DDR1-229ENST00000396342 IGLV8-61A0A075B6I0 122 aa9□□□□□ -0.97
DDR1-229ENST00000396342 F8WEM9 126 aa8.99□□□□□ -0.97
DDR1-229ENST00000396342 TCL1BO95988 128 aa8.98□□□□□ -0.97
DDR1-229ENST00000396342 VAMP3Q15836 100 aa8.98□□□□□ -0.97
DDR1-229ENST00000396342 PCOTHQ58A44 107 aa8.98□□□□□ -0.97
DDR1-229ENST00000396342 TRAV13-2A0A0B4J235 113 aa8.97□□□□□ -0.97
DDR1-229ENST00000396342 C3orf79P0CE67 100 aa8.97□□□□□ -0.97
DDR1-229ENST00000396342 KRTAP4-1Q9BYQ7 146 aa8.97□□□□□ -0.97
DDR1-229ENST00000396342 TTTY13Q9BZ97 58 aa8.96□□□□□ -0.98
DDR1-229ENST00000396342 CFC1BP0CG36 223 aa8.94□□□□□ -0.98
DDR1-229ENST00000396342 Q5XG85 94 aa8.93□□□□□ -0.98
DDR1-229ENST00000396342 SNRPEP62304 92 aaKnown RBP8.92□□□□□ -0.98
DDR1-229ENST00000396342 MUSTN1Q8IVN3 82 aa8.92□□□□□ -0.98
DDR1-229ENST00000396342 IGLV5-48A0A075B6I7 105 aa8.9□□□□□ -0.98
DDR1-229ENST00000396342 HSBP1L1C9JCN9 74 aa8.89□□□□□ -0.99
DDR1-229ENST00000396342 LCE2DQ5TA82 110 aaPredicted RBP8.89□□□□□ -0.99
DDR1-229ENST00000396342 COX6B2Q6YFQ2 88 aa8.89□□□□□ -0.99
DDR1-229ENST00000396342 C1orf195Q5TG92 126 aa8.88□□□□□ -0.99
DDR1-229ENST00000396342 ATOH7Q8N100 152 aa8.88□□□□□ -0.99
DDR1-229ENST00000396342 M0R2T5 61 aa8.87□□□□□ -0.99
DDR1-229ENST00000396342 COA6Q5JTJ3 125 aaKnown RBP8.87□□□□□ -0.99
DDR1-229ENST00000396342 ANKRD39Q53RE8 183 aa8.86□□□□□ -0.99
DDR1-229ENST00000396342 SMIM29Q86T20 159 aa8.86□□□□□ -0.99
DDR1-229ENST00000396342 SMIM11BQ8TCY0 68 aa8.86□□□□□ -0.99
DDR1-229ENST00000396342 Q6JHZ5 121 aa8.85□□□□□ -0.99
DDR1-229ENST00000396342 SNCGO76070 127 aa8.83□□□□□ -1
DDR1-229ENST00000396342 S100A2P29034 98 aa8.83□□□□□ -1
DDR1-229ENST00000396342 RPL37P61927 97 aaKnown RBP8.83□□□□□ -1
DDR1-229ENST00000396342 PCP2Q8IVA1 136 aa8.83□□□□□ -1
DDR1-229ENST00000396342 hADV29S1A0JD25 119 aa8.82□□□□□ -1
DDR1-229ENST00000396342 S100A1P23297 94 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms