RNA–Protein interactions for RNA: ENST00000392745.6

TRAF3-203, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 2,459 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-203ENST00000392745 DNAH9Q9NYC9 4486 aa12.15□□□□□ -0.46
TRAF3-203ENST00000392745 CXCL6P80162 114 aa12.15□□□□□ -0.46
TRAF3-203ENST00000392745 KLKP1Q107X0 134 aa12.15□□□□□ -0.46
TRAF3-203ENST00000392745 DIRC1Q969H9 104 aa12.14□□□□□ -0.47
TRAF3-203ENST00000392745 PDE6GP18545 87 aa12.13□□□□□ -0.47
TRAF3-203ENST00000392745 C6orf48Q9UBA6 75 aa12.13□□□□□ -0.47
TRAF3-203ENST00000392745 TRBV7-4A0A0J9YYF1 115 aa12.12□□□□□ -0.47
TRAF3-203ENST00000392745 EPM2AB3EWF7 344 aa12.12□□□□□ -0.47
TRAF3-203ENST00000392745 SERP1Q9Y6X1 66 aa12.12□□□□□ -0.47
TRAF3-203ENST00000392745 ZNF73O43830 326 aaPredicted RBP12.11□□□□□ -0.47
TRAF3-203ENST00000392745 F8WEM9 126 aa12.1□□□□□ -0.47
TRAF3-203ENST00000392745 COX7BP24311 80 aa12.1□□□□□ -0.47
TRAF3-203ENST00000392745 LINC01556Q5JQF7 62 aa12.1□□□□□ -0.47
TRAF3-203ENST00000392745 KRTAP26-1Q6PEX3 210 aa12.1□□□□□ -0.47
TRAF3-203ENST00000392745 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.09□□□□□ -0.47
TRAF3-203ENST00000392745 STAB2Q8WWQ8 2551 aa12.08□□□□□ -0.48
TRAF3-203ENST00000392745 LINC00588Q9Y4M8 146 aa12.08□□□□□ -0.48
TRAF3-203ENST00000392745 GVQW2A0A096LPI5 108 aaPredicted RBP12.08□□□□□ -0.48
TRAF3-203ENST00000392745 H3BQ85 93 aa12.08□□□□□ -0.48
TRAF3-203ENST00000392745 ELOF1P60002 83 aaKnown RBP12.07□□□□□ -0.48
TRAF3-203ENST00000392745 DNAH10OSP0CZ25 163 aa12.05□□□□□ -0.48
TRAF3-203ENST00000392745 HIGD2BQ4VC39 106 aa12.03□□□□□ -0.48
TRAF3-203ENST00000392745 B9D2Q9BPU9 175 aa12.03□□□□□ -0.48
TRAF3-203ENST00000392745 Q8N9L7 120 aa12.03□□□□□ -0.48
TRAF3-203ENST00000392745 TRBV7-6A0A0J9YX20 115 aa12.02□□□□□ -0.48
TRAF3-203ENST00000392745 VPREB1P12018 145 aa12.02□□□□□ -0.48
TRAF3-203ENST00000392745 DNHD1Q96M86 4753 aa12.02□□□□□ -0.49
TRAF3-203ENST00000392745 LYSTQ99698 3801 aa12.01□□□□□ -0.49
TRAF3-203ENST00000392745 NREPQ16612 68 aa12.01□□□□□ -0.49
TRAF3-203ENST00000392745 C1orf43Q9BWL3 253 aa12□□□□□ -0.49
TRAF3-203ENST00000392745 IGKV2D-24A0A075B6R9 120 aa12□□□□□ -0.49
TRAF3-203ENST00000392745 FP248Q71RG6 208 aaPredicted RBP12□□□□□ -0.49
TRAF3-203ENST00000392745 BPY2O14599 106 aa11.99□□□□□ -0.49
TRAF3-203ENST00000392745 C15orf56Q8N910 161 aa11.99□□□□□ -0.49
TRAF3-203ENST00000392745 CAMK2N2Q96S95 79 aa11.99□□□□□ -0.49
TRAF3-203ENST00000392745 LINC00528Q8N1L1 170 aa11.98□□□□□ -0.49
TRAF3-203ENST00000392745 LINC00336Q6ZUF6 198 aa11.97□□□□□ -0.49
TRAF3-203ENST00000392745 CSMD3Q7Z407 3707 aa11.97□□□□□ -0.49
TRAF3-203ENST00000392745 DNAH1Q9P2D7 4330 aa11.97□□□□□ -0.49
TRAF3-203ENST00000392745 M0R378 163 aa11.96□□□□□ -0.5
TRAF3-203ENST00000392745 Q6ZRU5 148 aa11.96□□□□□ -0.5
TRAF3-203ENST00000392745 TMEM254Q8TBM7 123 aa11.96□□□□□ -0.5
TRAF3-203ENST00000392745 NDUFC1O43677 76 aa11.95□□□□□ -0.5
TRAF3-203ENST00000392745 LINC00474Q9P2X8 69 aa11.95□□□□□ -0.5
TRAF3-203ENST00000392745 SMIM26A0A096LP01 95 aa11.95□□□□□ -0.5
TRAF3-203ENST00000392745 IGKV4-1P06312 121 aa11.95□□□□□ -0.5
TRAF3-203ENST00000392745 PRKDCP78527 4128 aaKnown RBP11.94□□□□□ -0.5
TRAF3-203ENST00000392745 C3orf84H3BNL1 204 aa11.92□□□□□ -0.5
TRAF3-203ENST00000392745 DYNC2H1Q8NCM8 4307 aaKnown RBP11.92□□□□□ -0.5
TRAF3-203ENST00000392745 CASC10Q5T4H9 136 aa11.9□□□□□ -0.5
TRAF3-203ENST00000392745 APLNQ9ULZ1 77 aa11.89□□□□□ -0.51
TRAF3-203ENST00000392745 OCR1Q9BZK8 76 aa11.89□□□□□ -0.51
TRAF3-203ENST00000392745 DNAH7Q8WXX0 4024 aa11.89□□□□□ -0.51
TRAF3-203ENST00000392745 Q6ZRP5 223 aa11.88□□□□□ -0.51
TRAF3-203ENST00000392745 DEFB105AQ8NG35 78 aa11.88□□□□□ -0.51
TRAF3-203ENST00000392745 TENM2Q9NT68 2774 aa11.88□□□□□ -0.51
TRAF3-203ENST00000392745 ERC2-IT1O76042 136 aa11.87□□□□□ -0.51
TRAF3-203ENST00000392745 PLECQ15149 4684 aaKnown RBP11.87□□□□□ -0.51
TRAF3-203ENST00000392745 ATP5EP56381 51 aaPredicted RBP11.87□□□□□ -0.51
TRAF3-203ENST00000392745 PRO0628Q9UI54 55 aa11.86□□□□□ -0.51
TRAF3-203ENST00000392745 MEGF8Q7Z7M0 2845 aa11.86□□□□□ -0.51
TRAF3-203ENST00000392745 FAM229BQ4G0N7 80 aa11.85□□□□□ -0.51
TRAF3-203ENST00000392745 A0A0U1RQV1 116 aa11.85□□□□□ -0.51
TRAF3-203ENST00000392745 KRTAP1-5Q9BYS1 174 aa11.85□□□□□ -0.51
TRAF3-203ENST00000392745 PRYO14603 147 aa11.84□□□□□ -0.51
TRAF3-203ENST00000392745 Q8N377 158 aa11.84□□□□□ -0.51
TRAF3-203ENST00000392745 DNAH10Q8IVF4 4471 aa11.83□□□□□ -0.52
TRAF3-203ENST00000392745 SYCNQ0VAF6 134 aa11.83□□□□□ -0.52
TRAF3-203ENST00000392745 HIGD2AQ9BW72 106 aa11.83□□□□□ -0.52
TRAF3-203ENST00000392745 SERTAD4-AS1Q5TG53 156 aa11.81□□□□□ -0.52
TRAF3-203ENST00000392745 STARD9Q9P2P6 4700 aa11.81□□□□□ -0.52
TRAF3-203ENST00000392745 F8WDY8 70 aa11.8□□□□□ -0.52
TRAF3-203ENST00000392745 UBE2DNLQ8IWF7 75 aa11.8□□□□□ -0.52
TRAF3-203ENST00000392745 KCNQ1DNQ9H478 68 aa11.79□□□□□ -0.52
TRAF3-203ENST00000392745 C7orf33Q8WU49 177 aa11.79□□□□□ -0.52
TRAF3-203ENST00000392745 IGLV5-48A0A075B6I7 105 aa11.78□□□□□ -0.52
TRAF3-203ENST00000392745 FUSP35637 526 aaKnown RBP eCLIP11.78□□□□□ -0.52
TRAF3-203ENST00000392745 SMIM29Q86T20 159 aa11.78□□□□□ -0.52
TRAF3-203ENST00000392745 NKAPP1Q8N9T2 125 aa11.78□□□□□ -0.52
TRAF3-203ENST00000392745 MPLKIPQ8TAP9 179 aa11.78□□□□□ -0.52
TRAF3-203ENST00000392745 FAM30AQ9NZY2 134 aa11.77□□□□□ -0.53
TRAF3-203ENST00000392745 A0A1W2PNM2 257 aa11.76□□□□□ -0.53
TRAF3-203ENST00000392745 NUPR2A6NF83 97 aa11.76□□□□□ -0.53
TRAF3-203ENST00000392745 RPL37AP8A6NKH3 93 aa11.74□□□□□ -0.53
TRAF3-203ENST00000392745 Q9BRP9 147 aa11.73□□□□□ -0.53
TRAF3-203ENST00000392745 ST20-AS1Q8NBB2 130 aa11.71□□□□□ -0.53
TRAF3-203ENST00000392745 BRK1Q8WUW1 75 aa11.71□□□□□ -0.53
TRAF3-203ENST00000392745 TLX1NBP0CAT3 122 aa11.7□□□□□ -0.54
TRAF3-203ENST00000392745 Q6ZRX8 168 aa11.7□□□□□ -0.54
TRAF3-203ENST00000392745 FAM168BA1KXE4 195 aa11.7□□□□□ -0.54
TRAF3-203ENST00000392745 C1orf137Q5JT78 98 aa11.7□□□□□ -0.54
TRAF3-203ENST00000392745 PKIGQ9Y2B9 76 aa11.69□□□□□ -0.54
TRAF3-203ENST00000392745 TNP2Q05952 138 aa11.69□□□□□ -0.54
TRAF3-203ENST00000392745 KRTAP4-16G5E9R7 235 aaPredicted RBP11.68□□□□□ -0.54
TRAF3-203ENST00000392745 DHRS4-AS1Q9P1J3 65 aa11.68□□□□□ -0.54
TRAF3-203ENST00000392745 PSCAO43653 123 aa11.66□□□□□ -0.54
TRAF3-203ENST00000392745 Q8NBF4 154 aa11.66□□□□□ -0.54
TRAF3-203ENST00000392745 VPS13DQ5THJ4 4388 aa11.65□□□□□ -0.54
TRAF3-203ENST00000392745 DSCR10P59022 87 aa11.65□□□□□ -0.54
TRAF3-203ENST00000392745 NBDYA0A0U1RRE5 68 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms