RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 FAM168BA1KXE4 195 aa12.89□□□□□ -0.35
PTPN11-202ENST00000392597 PRYO14603 147 aa12.89□□□□□ -0.35
PTPN11-202ENST00000392597 DNAH10Q8IVF4 4471 aa12.89□□□□□ -0.35
PTPN11-202ENST00000392597 IGLV1-50A0A075B6I6 118 aa12.88□□□□□ -0.35
PTPN11-202ENST00000392597 KRTAP7-1Q8IUC3 87 aa12.88□□□□□ -0.35
PTPN11-202ENST00000392597 C16orf90A8MZG2 172 aa12.87□□□□□ -0.35
PTPN11-202ENST00000392597 CCKP06307 115 aa12.87□□□□□ -0.35
PTPN11-202ENST00000392597 C21orf62-AS1Q17RA5 79 aa12.87□□□□□ -0.35
PTPN11-202ENST00000392597 Q6Q795 121 aa12.87□□□□□ -0.35
PTPN11-202ENST00000392597 MRPL55Q7Z7F7 128 aaKnown RBP12.87□□□□□ -0.35
PTPN11-202ENST00000392597 LINC00643Q86TS7 51 aa12.87□□□□□ -0.35
PTPN11-202ENST00000392597 SPRR1AP35321 89 aa12.85□□□□□ -0.35
PTPN11-202ENST00000392597 SMCR5Q8TEV8 140 aa12.85□□□□□ -0.35
PTPN11-202ENST00000392597 VPS13DQ5THJ4 4388 aa12.85□□□□□ -0.35
PTPN11-202ENST00000392597 LRCOL1A6NCL2 159 aa12.85□□□□□ -0.35
PTPN11-202ENST00000392597 RBM3P98179 157 aaKnown RBP12.85□□□□□ -0.35
PTPN11-202ENST00000392597 Q6ZRN7 208 aaPredicted RBP12.85□□□□□ -0.35
PTPN11-202ENST00000392597 LAMTOR3Q9UHA4 124 aa12.85□□□□□ -0.35
PTPN11-202ENST00000392597 FAM19A5Q7Z5A7 132 aaPredicted RBP12.84□□□□□ -0.35
PTPN11-202ENST00000392597 PKIGQ9Y2B9 76 aa12.84□□□□□ -0.35
PTPN11-202ENST00000392597 KRTAP4-16G5E9R7 235 aaPredicted RBP12.83□□□□□ -0.36
PTPN11-202ENST00000392597 A0A096LNI7 61 aa12.82□□□□□ -0.36
PTPN11-202ENST00000392597 A0A1B0GV72 72 aa12.82□□□□□ -0.36
PTPN11-202ENST00000392597 LOC110117498A0A087WWA1 95 aa12.82□□□□□ -0.36
PTPN11-202ENST00000392597 TRBV7-7A0A0K0K1E9 115 aa12.82□□□□□ -0.36
PTPN11-202ENST00000392597 RPL37AP8A6NKH3 93 aa12.82□□□□□ -0.36
PTPN11-202ENST00000392597 Q6ZRX8 168 aa12.81□□□□□ -0.36
PTPN11-202ENST00000392597 DHRS4-AS1Q9P1J3 65 aa12.81□□□□□ -0.36
PTPN11-202ENST00000392597 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.8□□□□□ -0.36
PTPN11-202ENST00000392597 PDE6GP18545 87 aa12.8□□□□□ -0.36
PTPN11-202ENST00000392597 B5MCH6 92 aa12.79□□□□□ -0.36
PTPN11-202ENST00000392597 IMUPQ9GZP8 106 aa12.79□□□□□ -0.36
PTPN11-202ENST00000392597 ETDCA0A1B0GVM5 59 aa12.78□□□□□ -0.36
PTPN11-202ENST00000392597 C9orf163Q8N9P6 203 aa12.78□□□□□ -0.36
PTPN11-202ENST00000392597 LINC00846Q9NV44 126 aa12.78□□□□□ -0.36
PTPN11-202ENST00000392597 Q6ZQT0 140 aa12.78□□□□□ -0.36
PTPN11-202ENST00000392597 DSCR8Q96T75 97 aa12.77□□□□□ -0.37
PTPN11-202ENST00000392597 IGKV2-24A0A0C4DH68 120 aa12.76□□□□□ -0.37
PTPN11-202ENST00000392597 NDUFV3P56181 108 aaKnown RBP12.75□□□□□ -0.37
PTPN11-202ENST00000392597 ALMS1Q8TCU4 4167 aa12.75□□□□□ -0.37
PTPN11-202ENST00000392597 LINC00476Q8WZB0 136 aa12.74□□□□□ -0.37
PTPN11-202ENST00000392597 REG3GQ6UW15 175 aa12.74□□□□□ -0.37
PTPN11-202ENST00000392597 A0A1W2PNN7 141 aa12.73□□□□□ -0.37
PTPN11-202ENST00000392597 Q9BRP9 147 aa12.73□□□□□ -0.37
PTPN11-202ENST00000392597 KMT2AQ03164 3969 aa12.73□□□□□ -0.37
PTPN11-202ENST00000392597 TRBV7-4A0A0J9YYF1 115 aa12.72□□□□□ -0.37
PTPN11-202ENST00000392597 M0R2N4 97 aa12.72□□□□□ -0.37
PTPN11-202ENST00000392597 Q6ZR54 194 aa12.72□□□□□ -0.37
PTPN11-202ENST00000392597 LINC00474Q9P2X8 69 aa12.72□□□□□ -0.37
PTPN11-202ENST00000392597 Q6JHZ5 121 aa12.7□□□□□ -0.38
PTPN11-202ENST00000392597 LY6G6CO95867 125 aa12.7□□□□□ -0.38
PTPN11-202ENST00000392597 SACSQ9NZJ4 4579 aa12.69□□□□□ -0.38
PTPN11-202ENST00000392597 LINC01547P58512 204 aaPredicted RBP12.68□□□□□ -0.38
PTPN11-202ENST00000392597 Q8N377 158 aa12.68□□□□□ -0.38
PTPN11-202ENST00000392597 KMT2CQ8NEZ4 4911 aaKnown RBP12.67□□□□□ -0.38
PTPN11-202ENST00000392597 A0A087WTM6 91 aa12.66□□□□□ -0.38
PTPN11-202ENST00000392597 CHTF8P0CG12 524 aa12.66□□□□□ -0.38
PTPN11-202ENST00000392597 IGLV5-48A0A075B6I7 105 aa12.65□□□□□ -0.38
PTPN11-202ENST00000392597 UBL5Q9BZL1 73 aa12.65□□□□□ -0.38
PTPN11-202ENST00000392597 ATP5EP2Q5VTU8 51 aa12.65□□□□□ -0.38
PTPN11-202ENST00000392597 UBE2BP63146 152 aa12.64□□□□□ -0.39
PTPN11-202ENST00000392597 DNAH6Q9C0G6 4158 aa12.64□□□□□ -0.39
PTPN11-202ENST00000392597 DEFB105AQ8NG35 78 aa12.63□□□□□ -0.39
PTPN11-202ENST00000392597 HYDINQ4G0P3 5121 aa12.63□□□□□ -0.39
PTPN11-202ENST00000392597 LCE6AA0A183 80 aa12.63□□□□□ -0.39
PTPN11-202ENST00000392597 ANAPC13Q9BS18 74 aa12.61□□□□□ -0.39
PTPN11-202ENST00000392597 ERC2-IT1O76042 136 aa12.6□□□□□ -0.39
PTPN11-202ENST00000392597 PHF5AQ7RTV0 110 aaKnown RBP12.6□□□□□ -0.39
PTPN11-202ENST00000392597 FAM19A1Q7Z5A9 133 aa12.59□□□□□ -0.39
PTPN11-202ENST00000392597 IGKV3D-7A0A0C4DH55 119 aa12.59□□□□□ -0.39
PTPN11-202ENST00000392597 ST20-AS1Q8NBB2 130 aa12.59□□□□□ -0.39
PTPN11-202ENST00000392597 EPM2AB3EWF7 344 aa12.57□□□□□ -0.4
PTPN11-202ENST00000392597 H0Y9J4 135 aa12.57□□□□□ -0.4
PTPN11-202ENST00000392597 C1orf134Q5TEV5 83 aa12.57□□□□□ -0.4
PTPN11-202ENST00000392597 SPACA4Q8TDM5 124 aa12.57□□□□□ -0.4
PTPN11-202ENST00000392597 FAM236AA0A1B0GUQ0 79 aa12.56□□□□□ -0.4
PTPN11-202ENST00000392597 FAM236BA0A1B0GV22 79 aa12.56□□□□□ -0.4
PTPN11-202ENST00000392597 TNP2Q05952 138 aa12.56□□□□□ -0.4
PTPN11-202ENST00000392597 HECTD4Q9Y4D8 3996 aa12.55□□□□□ -0.4
PTPN11-202ENST00000392597 PANO1I0J062 215 aa12.55□□□□□ -0.4
PTPN11-202ENST00000392597 PRLHP81277 87 aa12.54□□□□□ -0.4
PTPN11-202ENST00000392597 Q6ZVQ6 151 aa12.54□□□□□ -0.4
PTPN11-202ENST00000392597 RTL8CO15255 209 aa12.53□□□□□ -0.4
PTPN11-202ENST00000392597 KRTAP11-1Q8IUC1 163 aa12.53□□□□□ -0.4
PTPN11-202ENST00000392597 DNAH2Q9P225 4427 aa12.53□□□□□ -0.4
PTPN11-202ENST00000392597 RYR2Q92736 4967 aa12.52□□□□□ -0.4
PTPN11-202ENST00000392597 A0A1B0GW54 56 aa12.51□□□□□ -0.41
PTPN11-202ENST00000392597 C3orf22Q8N5N4 141 aa12.51□□□□□ -0.41
PTPN11-202ENST00000392597 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.51□□□□□ -0.41
PTPN11-202ENST00000392597 HIST1H4AP62805 103 aaKnown RBP12.51□□□□□ -0.41
PTPN11-202ENST00000392597 DPH3Q96FX2 82 aa12.51□□□□□ -0.41
PTPN11-202ENST00000392597 DNAH17Q9UFH2 4485 aa12.49□□□□□ -0.41
PTPN11-202ENST00000392597 SMIM29Q86T20 159 aa12.48□□□□□ -0.41
PTPN11-202ENST00000392597 HIGD2AQ9BW72 106 aa12.48□□□□□ -0.41
PTPN11-202ENST00000392597 BCE1O60756 84 aa12.47□□□□□ -0.41
PTPN11-202ENST00000392597 CXCL6P80162 114 aa12.47□□□□□ -0.41
PTPN11-202ENST00000392597 C1orf137Q5JT78 98 aa12.47□□□□□ -0.41
PTPN11-202ENST00000392597 FUSP35637 526 aaKnown RBP eCLIP12.46□□□□□ -0.42
PTPN11-202ENST00000392597 F8WEM9 126 aa12.45□□□□□ -0.42
PTPN11-202ENST00000392597 UBE2AP49459 152 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms