RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 FAM104AQ969W3 186 aa9.97□□□□□ -0.81
CCDC50-201ENST00000392455 PHF5AQ7RTV0 110 aaKnown RBP9.97□□□□□ -0.81
CCDC50-201ENST00000392455 IGLV5-37A0A075B6J1 123 aa9.96□□□□□ -0.82
CCDC50-201ENST00000392455 CHTF8P0CG12 524 aa9.96□□□□□ -0.82
CCDC50-201ENST00000392455 KCNQ1DNQ9H478 68 aa9.95□□□□□ -0.82
CCDC50-201ENST00000392455 FAM218AQ96MZ4 157 aa9.95□□□□□ -0.82
CCDC50-201ENST00000392455 EP400Q96L91 3159 aa9.94□□□□□ -0.82
CCDC50-201ENST00000392455 COL4A2P08572 1712 aa9.94□□□□□ -0.82
CCDC50-201ENST00000392455 LINC00315P59091 139 aa9.94□□□□□ -0.82
CCDC50-201ENST00000392455 DMAC1Q96GE9 116 aa9.93□□□□□ -0.82
CCDC50-201ENST00000392455 C10orf142B7Z368 130 aa9.92□□□□□ -0.82
CCDC50-201ENST00000392455 SMCPP49901 116 aaPredicted RBP9.92□□□□□ -0.82
CCDC50-201ENST00000392455 HRES1P13985 223 aa9.92□□□□□ -0.82
CCDC50-201ENST00000392455 ZNF861PO60384 105 aa9.89□□□□□ -0.83
CCDC50-201ENST00000392455 CAMK2N1Q7Z7J9 78 aa9.89□□□□□ -0.83
CCDC50-201ENST00000392455 OBSCN-AS1Q96MR7 158 aa9.88□□□□□ -0.83
CCDC50-201ENST00000392455 PLA2G2DQ9UNK4 145 aa9.87□□□□□ -0.83
CCDC50-201ENST00000392455 WWC2-AS2Q96NR7 200 aa9.85□□□□□ -0.83
CCDC50-201ENST00000392455 CEP295Q9C0D2 2601 aa9.85□□□□□ -0.83
CCDC50-201ENST00000392455 C15orf56Q8N910 161 aa9.85□□□□□ -0.83
CCDC50-201ENST00000392455 C9orf163Q8N9P6 203 aa9.83□□□□□ -0.84
CCDC50-201ENST00000392455 IGLV1-50A0A075B6I6 118 aa9.83□□□□□ -0.84
CCDC50-201ENST00000392455 H7BZZ5 65 aa9.83□□□□□ -0.84
CCDC50-201ENST00000392455 IGFL1Q6UW32 110 aa9.83□□□□□ -0.84
CCDC50-201ENST00000392455 LINC00336Q6ZUF6 198 aa9.83□□□□□ -0.84
CCDC50-201ENST00000392455 LINC00528Q8N1L1 170 aa9.82□□□□□ -0.84
CCDC50-201ENST00000392455 IGLV5-48A0A075B6I7 105 aa9.81□□□□□ -0.84
CCDC50-201ENST00000392455 DSCR10P59022 87 aa9.81□□□□□ -0.84
CCDC50-201ENST00000392455 LINC00588Q9Y4M8 146 aa9.81□□□□□ -0.84
CCDC50-201ENST00000392455 A0A0D9SG42 100 aa9.79□□□□□ -0.84
CCDC50-201ENST00000392455 TLX1NBP0CAT3 122 aa9.77□□□□□ -0.85
CCDC50-201ENST00000392455 KRTAP24-1Q3LI83 254 aa9.77□□□□□ -0.85
CCDC50-201ENST00000392455 WIPF1O43516 503 aa9.76□□□□□ -0.85
CCDC50-201ENST00000392455 Q8NAQ8 132 aa9.76□□□□□ -0.85
CCDC50-201ENST00000392455 TNP2Q05952 138 aa9.75□□□□□ -0.85
CCDC50-201ENST00000392455 A0A1B0GU33 70 aa9.74□□□□□ -0.85
CCDC50-201ENST00000392455 FAM168BA1KXE4 195 aa9.74□□□□□ -0.85
CCDC50-201ENST00000392455 Q75L30 129 aa9.74□□□□□ -0.85
CCDC50-201ENST00000392455 HECTD1Q9ULT8 2610 aa9.73□□□□□ -0.85
CCDC50-201ENST00000392455 CENPFP49454 3210 aa9.72□□□□□ -0.85
CCDC50-201ENST00000392455 PRRC2CQ9Y520 2896 aaKnown RBP9.72□□□□□ -0.85
CCDC50-201ENST00000392455 C9orf92A6NGG3 77 aa9.68□□□□□ -0.86
CCDC50-201ENST00000392455 MGAM2Q2M2H8 2515 aa9.67□□□□□ -0.86
CCDC50-201ENST00000392455 Q8N377 158 aa9.67□□□□□ -0.86
CCDC50-201ENST00000392455 LITAFQ99732 161 aa9.67□□□□□ -0.86
CCDC50-201ENST00000392455 Q6ZSA8 131 aa9.66□□□□□ -0.86
CCDC50-201ENST00000392455 ZNF575Q86XF7 245 aa9.65□□□□□ -0.86
CCDC50-201ENST00000392455 IGLV7-43P04211 117 aa9.64□□□□□ -0.87
CCDC50-201ENST00000392455 DMBT1Q9UGM3 2413 aaPredicted RBP9.64□□□□□ -0.87
CCDC50-201ENST00000392455 PRR34Q9NV39 138 aa9.64□□□□□ -0.87
CCDC50-201ENST00000392455 MAST4O15021 2626 aa9.64□□□□□ -0.87
CCDC50-201ENST00000392455 GOLGB1Q14789 3259 aaKnown RBP9.62□□□□□ -0.87
CCDC50-201ENST00000392455 IGLV7-46A0A075B6I9 117 aa9.61□□□□□ -0.87
CCDC50-201ENST00000392455 NBEAL1Q6ZS30 2694 aa9.61□□□□□ -0.87
CCDC50-201ENST00000392455 AKAP13Q12802 2813 aa9.61□□□□□ -0.87
CCDC50-201ENST00000392455 H3BS24 57 aa9.61□□□□□ -0.87
CCDC50-201ENST00000392455 CFAP46Q8IYW2 2715 aa9.6□□□□□ -0.87
CCDC50-201ENST00000392455 SPRR4Q96PI1 79 aa9.6□□□□□ -0.87
CCDC50-201ENST00000392455 STAB1Q9NY15 2570 aa9.6□□□□□ -0.87
CCDC50-201ENST00000392455 PSORS1C2Q9UIG4 136 aa9.59□□□□□ -0.87
CCDC50-201ENST00000392455 CNBPP62633 177 aaKnown RBP9.58□□□□□ -0.88
CCDC50-201ENST00000392455 CSAG1Q6PB30 78 aa9.58□□□□□ -0.88
CCDC50-201ENST00000392455 ASB16-AS1Q495Z4 193 aa9.57□□□□□ -0.88
CCDC50-201ENST00000392455 CENPEQ02224 2701 aa9.57□□□□□ -0.88
CCDC50-201ENST00000392455 Q8N1X5 172 aa9.56□□□□□ -0.88
CCDC50-201ENST00000392455 KRTAP10-11P60412 298 aa9.55□□□□□ -0.88
CCDC50-201ENST00000392455 ATRQ13535 2644 aa9.55□□□□□ -0.88
CCDC50-201ENST00000392455 KLK9Q2XQG4 91 aa9.54□□□□□ -0.88
CCDC50-201ENST00000392455 A0A087WTM6 91 aa9.54□□□□□ -0.88
CCDC50-201ENST00000392455 M0R2T5 61 aa9.53□□□□□ -0.88
CCDC50-201ENST00000392455 SPINK7P58062 85 aa9.52□□□□□ -0.89
CCDC50-201ENST00000392455 FAM229BQ4G0N7 80 aa9.52□□□□□ -0.89
CCDC50-201ENST00000392455 OCR1Q9BZK8 76 aa9.51□□□□□ -0.89
CCDC50-201ENST00000392455 S4R3F8 94 aa9.51□□□□□ -0.89
CCDC50-201ENST00000392455 K7EIL1 84 aa9.49□□□□□ -0.89
CCDC50-201ENST00000392455 LINC01558Q9Y6Z2 57 aa9.48□□□□□ -0.89
CCDC50-201ENST00000392455 SMR3BP02814 79 aaPredicted RBP9.47□□□□□ -0.89
CCDC50-201ENST00000392455 PRR26Q8N8Z3 221 aa9.46□□□□□ -0.89
CCDC50-201ENST00000392455 FLNBO75369 2602 aaKnown RBP9.46□□□□□ -0.89
CCDC50-201ENST00000392455 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.46□□□□□ -0.9
CCDC50-201ENST00000392455 R4GN34 69 aa9.45□□□□□ -0.9
CCDC50-201ENST00000392455 A0A0G2JQZ4 141 aa9.44□□□□□ -0.9
CCDC50-201ENST00000392455 A0A1W2PNN7 141 aa9.44□□□□□ -0.9
CCDC50-201ENST00000392455 ANAPC11Q9NYG5 84 aa9.43□□□□□ -0.9
CCDC50-201ENST00000392455 ROMO1P60602 79 aa9.42□□□□□ -0.9
CCDC50-201ENST00000392455 C19orf73Q9NVV2 129 aa9.39□□□□□ -0.91
CCDC50-201ENST00000392455 KRTAP10-3P60369 221 aa9.38□□□□□ -0.91
CCDC50-201ENST00000392455 Q8N9P0 234 aaPredicted RBP9.37□□□□□ -0.91
CCDC50-201ENST00000392455 A0A1W2PNM2 257 aa9.36□□□□□ -0.91
CCDC50-201ENST00000392455 ZCCHC13Q8WW36 166 aaKnown RBP9.36□□□□□ -0.91
CCDC50-201ENST00000392455 KRTAP16-1A8MUX0 517 aa9.36□□□□□ -0.91
CCDC50-201ENST00000392455 EIF4EBP3O60516 100 aaPredicted RBP9.36□□□□□ -0.91
CCDC50-201ENST00000392455 RPL37P61927 97 aaKnown RBP9.36□□□□□ -0.91
CCDC50-201ENST00000392455 LINC00612Q8N6U2 182 aa9.35□□□□□ -0.91
CCDC50-201ENST00000392455 H1FX-AS1Q4G0G2 97 aa9.35□□□□□ -0.91
CCDC50-201ENST00000392455 SEC61BP60468 96 aaKnown RBP9.35□□□□□ -0.91
CCDC50-201ENST00000392455 PLAC4Q8WY50 150 aa9.34□□□□□ -0.91
CCDC50-201ENST00000392455 STAB2Q8WWQ8 2551 aa9.33□□□□□ -0.92
CCDC50-201ENST00000392455 DNAH12Q6ZR08 3092 aa9.32□□□□□ -0.92
CCDC50-201ENST00000392455 KMT2BQ9UMN6 2715 aaPredicted RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms