RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 Q8N814 137 aa7.36□□□□□ -1.23
SMARCAL1-203ENST00000392128 C16orf90A8MZG2 172 aa7.35□□□□□ -1.23
SMARCAL1-203ENST00000392128 LINC00575Q6W349 94 aa7.35□□□□□ -1.23
SMARCAL1-203ENST00000392128 FAM168BA1KXE4 195 aa7.35□□□□□ -1.23
SMARCAL1-203ENST00000392128 C3orf22Q8N5N4 141 aa7.35□□□□□ -1.23
SMARCAL1-203ENST00000392128 C7orf33Q8WU49 177 aa7.35□□□□□ -1.23
SMARCAL1-203ENST00000392128 UQCRQO14949 82 aa7.34□□□□□ -1.23
SMARCAL1-203ENST00000392128 C9orf153Q5TBE3 101 aa7.34□□□□□ -1.23
SMARCAL1-203ENST00000392128 Q5XG85 94 aa7.34□□□□□ -1.23
SMARCAL1-203ENST00000392128 KRTAP7-1Q8IUC3 87 aa7.34□□□□□ -1.23
SMARCAL1-203ENST00000392128 TEX49A0A1B0GTD5 131 aa7.33□□□□□ -1.24
SMARCAL1-203ENST00000392128 KCNQ1DNQ9H478 68 aa7.33□□□□□ -1.24
SMARCAL1-203ENST00000392128 PKIGQ9Y2B9 76 aa7.33□□□□□ -1.24
SMARCAL1-203ENST00000392128 A0A096LNI7 61 aa7.33□□□□□ -1.24
SMARCAL1-203ENST00000392128 ELOF1P60002 83 aaKnown RBP7.33□□□□□ -1.24
SMARCAL1-203ENST00000392128 HRCT1Q6UXD1 115 aa7.33□□□□□ -1.24
SMARCAL1-203ENST00000392128 C9orf163Q8N9P6 203 aa7.33□□□□□ -1.24
SMARCAL1-203ENST00000392128 C22orf24Q9Y442 160 aa7.33□□□□□ -1.24
SMARCAL1-203ENST00000392128 C4orf26Q17RF5 130 aa7.32□□□□□ -1.24
SMARCAL1-203ENST00000392128 LINC00476Q8WZB0 136 aa7.32□□□□□ -1.24
SMARCAL1-203ENST00000392128 ORMDL1Q9P0S3 153 aa7.32□□□□□ -1.24
SMARCAL1-203ENST00000392128 C3orf84H3BNL1 204 aa7.32□□□□□ -1.24
SMARCAL1-203ENST00000392128 LY6G6CO95867 125 aa7.32□□□□□ -1.24
SMARCAL1-203ENST00000392128 COX7BP24311 80 aa7.32□□□□□ -1.24
SMARCAL1-203ENST00000392128 KMT2AQ03164 3969 aa7.32□□□□□ -1.24
SMARCAL1-203ENST00000392128 A0A087WTM6 91 aa7.31□□□□□ -1.24
SMARCAL1-203ENST00000392128 hADV29S1A0JD25 119 aa7.31□□□□□ -1.24
SMARCAL1-203ENST00000392128 MRPL55Q7Z7F7 128 aaKnown RBP7.31□□□□□ -1.24
SMARCAL1-203ENST00000392128 IGLV1-50A0A075B6I6 118 aa7.3□□□□□ -1.24
SMARCAL1-203ENST00000392128 DNAH6Q9C0G6 4158 aa7.3□□□□□ -1.24
SMARCAL1-203ENST00000392128 IGKV2-24A0A0C4DH68 120 aa7.3□□□□□ -1.24
SMARCAL1-203ENST00000392128 TRBV7-7A0A0K0K1E9 115 aa7.3□□□□□ -1.24
SMARCAL1-203ENST00000392128 PRYO14603 147 aa7.3□□□□□ -1.24
SMARCAL1-203ENST00000392128 C1orf134Q5TEV5 83 aa7.3□□□□□ -1.24
SMARCAL1-203ENST00000392128 LINC00528Q8N1L1 170 aa7.29□□□□□ -1.24
SMARCAL1-203ENST00000392128 RPL37AP8A6NKH3 93 aa7.28□□□□□ -1.24
SMARCAL1-203ENST00000392128 CRYGAP11844 174 aa7.28□□□□□ -1.24
SMARCAL1-203ENST00000392128 SDIM1Q6ZPB5 146 aa7.28□□□□□ -1.24
SMARCAL1-203ENST00000392128 TMEM256-PLSCR3K7ERE1 68 aa7.28□□□□□ -1.24
SMARCAL1-203ENST00000392128 SPRR1AP35321 89 aa7.28□□□□□ -1.24
SMARCAL1-203ENST00000392128 DPH3Q96FX2 82 aa7.28□□□□□ -1.24
SMARCAL1-203ENST00000392128 IMUPQ9GZP8 106 aa7.28□□□□□ -1.24
SMARCAL1-203ENST00000392128 ALMS1Q8TCU4 4167 aa7.27□□□□□ -1.25
SMARCAL1-203ENST00000392128 A0A1W2PNN7 141 aa7.27□□□□□ -1.25
SMARCAL1-203ENST00000392128 LINC00474Q9P2X8 69 aa7.27□□□□□ -1.25
SMARCAL1-203ENST00000392128 DNAH2Q9P225 4427 aa7.27□□□□□ -1.25
SMARCAL1-203ENST00000392128 FAM236AA0A1B0GUQ0 79 aa7.27□□□□□ -1.25
SMARCAL1-203ENST00000392128 FAM236BA0A1B0GV22 79 aa7.27□□□□□ -1.25
SMARCAL1-203ENST00000392128 KRTAP4-16G5E9R7 235 aaPredicted RBP7.27□□□□□ -1.25
SMARCAL1-203ENST00000392128 TMEM258P61165 79 aa7.27□□□□□ -1.25
SMARCAL1-203ENST00000392128 GAGE2AQ6NT46 116 aa7.27□□□□□ -1.25
SMARCAL1-203ENST00000392128 OBSCN-AS1Q96MR7 158 aa7.27□□□□□ -1.25
SMARCAL1-203ENST00000392128 H3BQ85 93 aa7.26□□□□□ -1.25
SMARCAL1-203ENST00000392128 INAFM2P0DMQ5 153 aa7.26□□□□□ -1.25
SMARCAL1-203ENST00000392128 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.26□□□□□ -1.25
SMARCAL1-203ENST00000392128 CHTF8P0CG12 524 aa7.26□□□□□ -1.25
SMARCAL1-203ENST00000392128 Q6ZQY7 126 aa7.26□□□□□ -1.25
SMARCAL1-203ENST00000392128 LINC00336Q6ZUF6 198 aa7.25□□□□□ -1.25
SMARCAL1-203ENST00000392128 C1orf195Q5TG92 126 aa7.24□□□□□ -1.25
SMARCAL1-203ENST00000392128 Q6ZRX8 168 aa7.24□□□□□ -1.25
SMARCAL1-203ENST00000392128 GHRHP01286 108 aa7.23□□□□□ -1.25
SMARCAL1-203ENST00000392128 FAM240AA0A1B0GVK7 77 aa7.23□□□□□ -1.25
SMARCAL1-203ENST00000392128 ETDCA0A1B0GVM5 59 aa7.23□□□□□ -1.25
SMARCAL1-203ENST00000392128 RTL8CO15255 209 aa7.23□□□□□ -1.25
SMARCAL1-203ENST00000392128 REG3GQ6UW15 175 aa7.23□□□□□ -1.25
SMARCAL1-203ENST00000392128 JMJD7-PLA2G4BH0Y9G9 81 aa7.22□□□□□ -1.25
SMARCAL1-203ENST00000392128 OXTP01178 125 aa7.22□□□□□ -1.25
SMARCAL1-203ENST00000392128 COX7CP15954 63 aa7.22□□□□□ -1.25
SMARCAL1-203ENST00000392128 DHRS4-AS1Q9P1J3 65 aa7.22□□□□□ -1.25
SMARCAL1-203ENST00000392128 DNAH17Q9UFH2 4485 aa7.21□□□□□ -1.25
SMARCAL1-203ENST00000392128 SPACA4Q8TDM5 124 aa7.21□□□□□ -1.25
SMARCAL1-203ENST00000392128 HECTD4Q9Y4D8 3996 aa7.21□□□□□ -1.26
SMARCAL1-203ENST00000392128 EPM2AB3EWF7 344 aa7.2□□□□□ -1.26
SMARCAL1-203ENST00000392128 PANO1I0J062 215 aa7.2□□□□□ -1.26
SMARCAL1-203ENST00000392128 C14orf132Q9NPU4 83 aa7.2□□□□□ -1.26
SMARCAL1-203ENST00000392128 PHF5AQ7RTV0 110 aaKnown RBP7.2□□□□□ -1.26
SMARCAL1-203ENST00000392128 Q9BRP9 147 aa7.2□□□□□ -1.26
SMARCAL1-203ENST00000392128 FAM236DA0A1B0GTK5 79 aa7.19□□□□□ -1.26
SMARCAL1-203ENST00000392128 ACYP1P07311 99 aa7.19□□□□□ -1.26
SMARCAL1-203ENST00000392128 FAM236CP0DP71 79 aa7.19□□□□□ -1.26
SMARCAL1-203ENST00000392128 TNP2Q05952 138 aa7.19□□□□□ -1.26
SMARCAL1-203ENST00000392128 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.19□□□□□ -1.26
SMARCAL1-203ENST00000392128 IGLV5-52A0A0A0MRZ9 124 aa7.19□□□□□ -1.26
SMARCAL1-203ENST00000392128 FUSP35637 526 aaKnown RBP eCLIP7.18□□□□□ -1.26
SMARCAL1-203ENST00000392128 UBE2BP63146 152 aa7.18□□□□□ -1.26
SMARCAL1-203ENST00000392128 FAM19A1Q7Z5A9 133 aa7.18□□□□□ -1.26
SMARCAL1-203ENST00000392128 LAMTOR3Q9UHA4 124 aa7.18□□□□□ -1.26
SMARCAL1-203ENST00000392128 FRAS1Q86XX4 4008 aa7.17□□□□□ -1.26
SMARCAL1-203ENST00000392128 RBM3P98179 157 aaKnown RBP7.16□□□□□ -1.26
SMARCAL1-203ENST00000392128 KRTAP11-1Q8IUC1 163 aa7.16□□□□□ -1.26
SMARCAL1-203ENST00000392128 CCKP06307 115 aa7.15□□□□□ -1.27
SMARCAL1-203ENST00000392128 LINC01547P58512 204 aaPredicted RBP7.15□□□□□ -1.27
SMARCAL1-203ENST00000392128 SMCR5Q8TEV8 140 aa7.15□□□□□ -1.27
SMARCAL1-203ENST00000392128 HYDINQ4G0P3 5121 aa7.14□□□□□ -1.27
SMARCAL1-203ENST00000392128 IGLV5-48A0A075B6I7 105 aa7.14□□□□□ -1.27
SMARCAL1-203ENST00000392128 LOC110117498A0A087WWA1 95 aa7.14□□□□□ -1.27
SMARCAL1-203ENST00000392128 H0Y9J4 135 aa7.13□□□□□ -1.27
SMARCAL1-203ENST00000392128 Q8N377 158 aa7.13□□□□□ -1.27
SMARCAL1-203ENST00000392128 ERC2-IT1O76042 136 aa7.13□□□□□ -1.27
SMARCAL1-203ENST00000392128 PRLHP81277 87 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms