RNA–Protein interactions for RNA: ENST00000391944.7

ERCC2-203, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 2,334 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-203ENST00000391944 PLECQ15149 4684 aaKnown RBP12.3□□□□□ -0.44
ERCC2-203ENST00000391944 CNBPP62633 177 aaKnown RBP12.29□□□□□ -0.44
ERCC2-203ENST00000391944 IGLV1-50A0A075B6I6 118 aa12.28□□□□□ -0.44
ERCC2-203ENST00000391944 DNAH7Q8WXX0 4024 aa12.27□□□□□ -0.44
ERCC2-203ENST00000391944 LOC110117498A0A087WWA1 95 aa12.26□□□□□ -0.45
ERCC2-203ENST00000391944 RPL37AP8A6NKH3 93 aa12.26□□□□□ -0.45
ERCC2-203ENST00000391944 PRYO14603 147 aa12.25□□□□□ -0.45
ERCC2-203ENST00000391944 Q6ZQT0 140 aa12.25□□□□□ -0.45
ERCC2-203ENST00000391944 PRKDCP78527 4128 aaKnown RBP12.25□□□□□ -0.45
ERCC2-203ENST00000391944 NDUFV3P56181 108 aaKnown RBP12.25□□□□□ -0.45
ERCC2-203ENST00000391944 C14orf177Q52M58 125 aa12.25□□□□□ -0.45
ERCC2-203ENST00000391944 NBDYA0A0U1RRE5 68 aa12.24□□□□□ -0.45
ERCC2-203ENST00000391944 MRPL55Q7Z7F7 128 aaKnown RBP12.24□□□□□ -0.45
ERCC2-203ENST00000391944 KRTAP4-16G5E9R7 235 aaPredicted RBP12.23□□□□□ -0.45
ERCC2-203ENST00000391944 SPRR1AP35321 89 aa12.23□□□□□ -0.45
ERCC2-203ENST00000391944 FAM19A5Q7Z5A7 132 aaPredicted RBP12.23□□□□□ -0.45
ERCC2-203ENST00000391944 DSCR8Q96T75 97 aa12.23□□□□□ -0.45
ERCC2-203ENST00000391944 C16orf90A8MZG2 172 aa12.22□□□□□ -0.45
ERCC2-203ENST00000391944 ANAPC13Q9BS18 74 aa12.22□□□□□ -0.45
ERCC2-203ENST00000391944 MEGF8Q7Z7M0 2845 aa12.22□□□□□ -0.45
ERCC2-203ENST00000391944 PDE6GP18545 87 aa12.21□□□□□ -0.45
ERCC2-203ENST00000391944 A0A096LNI7 61 aa12.2□□□□□ -0.46
ERCC2-203ENST00000391944 B5MCH6 92 aa12.2□□□□□ -0.46
ERCC2-203ENST00000391944 Q6JHZ5 121 aa12.2□□□□□ -0.46
ERCC2-203ENST00000391944 Q6ZRX8 168 aa12.2□□□□□ -0.46
ERCC2-203ENST00000391944 DHRS4-AS1Q9P1J3 65 aa12.19□□□□□ -0.46
ERCC2-203ENST00000391944 DNHD1Q96M86 4753 aa12.19□□□□□ -0.46
ERCC2-203ENST00000391944 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.18□□□□□ -0.46
ERCC2-203ENST00000391944 ETDCA0A1B0GVM5 59 aa12.18□□□□□ -0.46
ERCC2-203ENST00000391944 LRCOL1A6NCL2 159 aa12.18□□□□□ -0.46
ERCC2-203ENST00000391944 TRBV7-4A0A0J9YYF1 115 aa12.17□□□□□ -0.46
ERCC2-203ENST00000391944 STARD9Q9P2P6 4700 aa12.17□□□□□ -0.46
ERCC2-203ENST00000391944 Q9BRP9 147 aa12.16□□□□□ -0.46
ERCC2-203ENST00000391944 VPS13DQ5THJ4 4388 aa12.16□□□□□ -0.46
ERCC2-203ENST00000391944 IGKV2-24A0A0C4DH68 120 aa12.16□□□□□ -0.46
ERCC2-203ENST00000391944 Q6ZRN7 208 aaPredicted RBP12.16□□□□□ -0.46
ERCC2-203ENST00000391944 IGKV3D-7A0A0C4DH55 119 aa12.15□□□□□ -0.46
ERCC2-203ENST00000391944 M0R2N4 97 aa12.14□□□□□ -0.47
ERCC2-203ENST00000391944 A0A1W2PNN7 141 aa12.14□□□□□ -0.47
ERCC2-203ENST00000391944 UBL5Q9BZL1 73 aa12.14□□□□□ -0.47
ERCC2-203ENST00000391944 REG3GQ6UW15 175 aa12.13□□□□□ -0.47
ERCC2-203ENST00000391944 Q8N377 158 aa12.13□□□□□ -0.47
ERCC2-203ENST00000391944 FAM236AA0A1B0GUQ0 79 aa12.12□□□□□ -0.47
ERCC2-203ENST00000391944 FAM236BA0A1B0GV22 79 aa12.12□□□□□ -0.47
ERCC2-203ENST00000391944 C9orf163Q8N9P6 203 aa12.12□□□□□ -0.47
ERCC2-203ENST00000391944 LINC01547P58512 204 aaPredicted RBP12.12□□□□□ -0.47
ERCC2-203ENST00000391944 DEFB105AQ8NG35 78 aa12.11□□□□□ -0.47
ERCC2-203ENST00000391944 ATP5EP2Q5VTU8 51 aa12.09□□□□□ -0.47
ERCC2-203ENST00000391944 PKIGQ9Y2B9 76 aa12.08□□□□□ -0.48
ERCC2-203ENST00000391944 IGLV5-48A0A075B6I7 105 aa12.06□□□□□ -0.48
ERCC2-203ENST00000391944 CHTF8P0CG12 524 aa12.06□□□□□ -0.48
ERCC2-203ENST00000391944 UBE2BP63146 152 aa12.06□□□□□ -0.48
ERCC2-203ENST00000391944 ERC2-IT1O76042 136 aa12.06□□□□□ -0.48
ERCC2-203ENST00000391944 ST20-AS1Q8NBB2 130 aa12.05□□□□□ -0.48
ERCC2-203ENST00000391944 HIST1H4AP62805 103 aaKnown RBP12.05□□□□□ -0.48
ERCC2-203ENST00000391944 Q6ZVQ6 151 aa12.04□□□□□ -0.48
ERCC2-203ENST00000391944 LINC00474Q9P2X8 69 aa12.02□□□□□ -0.49
ERCC2-203ENST00000391944 A0A087WVE0 104 aa12□□□□□ -0.49
ERCC2-203ENST00000391944 PHF5AQ7RTV0 110 aaKnown RBP12□□□□□ -0.49
ERCC2-203ENST00000391944 C3orf22Q8N5N4 141 aa12□□□□□ -0.49
ERCC2-203ENST00000391944 Q6ZR54 194 aa12□□□□□ -0.49
ERCC2-203ENST00000391944 FAM19A1Q7Z5A9 133 aa12□□□□□ -0.49
ERCC2-203ENST00000391944 TNP2Q05952 138 aa11.99□□□□□ -0.49
ERCC2-203ENST00000391944 A0A087WTM6 91 aa11.98□□□□□ -0.49
ERCC2-203ENST00000391944 CCDC179H3BU77 68 aa11.98□□□□□ -0.49
ERCC2-203ENST00000391944 HAMPP81172 84 aa11.97□□□□□ -0.49
ERCC2-203ENST00000391944 PRLHP81277 87 aa11.97□□□□□ -0.49
ERCC2-203ENST00000391944 KRTAP11-1Q8IUC1 163 aa11.97□□□□□ -0.49
ERCC2-203ENST00000391944 PANO1I0J062 215 aa11.95□□□□□ -0.5
ERCC2-203ENST00000391944 ATOX1O00244 68 aa11.95□□□□□ -0.5
ERCC2-203ENST00000391944 CXCL6P80162 114 aa11.95□□□□□ -0.5
ERCC2-203ENST00000391944 KRTAP21-3Q3LHN1 58 aa11.93□□□□□ -0.5
ERCC2-203ENST00000391944 SMIM29Q86T20 159 aa11.93□□□□□ -0.5
ERCC2-203ENST00000391944 KMT2AQ03164 3969 aa11.93□□□□□ -0.5
ERCC2-203ENST00000391944 H0Y9J4 135 aa11.93□□□□□ -0.5
ERCC2-203ENST00000391944 FBN3Q75N90 2809 aa11.93□□□□□ -0.5
ERCC2-203ENST00000391944 C1orf137Q5JT78 98 aa11.92□□□□□ -0.5
ERCC2-203ENST00000391944 HIGD2AQ9BW72 106 aa11.92□□□□□ -0.5
ERCC2-203ENST00000391944 A0A1B0GW54 56 aa11.91□□□□□ -0.5
ERCC2-203ENST00000391944 DPH3Q96FX2 82 aa11.91□□□□□ -0.5
ERCC2-203ENST00000391944 DNAH2Q9P225 4427 aa11.91□□□□□ -0.5
ERCC2-203ENST00000391944 SPACA4Q8TDM5 124 aa11.91□□□□□ -0.5
ERCC2-203ENST00000391944 EPM2AB3EWF7 344 aa11.9□□□□□ -0.5
ERCC2-203ENST00000391944 A0A1W2PNM2 257 aa11.89□□□□□ -0.51
ERCC2-203ENST00000391944 FUSP35637 526 aaKnown RBP eCLIP11.89□□□□□ -0.511e-9■■■□□ 15.8
ERCC2-203ENST00000391944 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.89□□□□□ -0.51
ERCC2-203ENST00000391944 HECTD4Q9Y4D8 3996 aa11.89□□□□□ -0.51
ERCC2-203ENST00000391944 TGP01266 2768 aa11.88□□□□□ -0.51
ERCC2-203ENST00000391944 NREPQ16612 68 aa11.88□□□□□ -0.51
ERCC2-203ENST00000391944 C3orf84H3BNL1 204 aa11.87□□□□□ -0.51
ERCC2-203ENST00000391944 RTL8CO15255 209 aa11.87□□□□□ -0.51
ERCC2-203ENST00000391944 Q8NBF4 154 aa11.87□□□□□ -0.51
ERCC2-203ENST00000391944 UQCRQO14949 82 aa11.86□□□□□ -0.51
ERCC2-203ENST00000391944 C1orf134Q5TEV5 83 aa11.86□□□□□ -0.51
ERCC2-203ENST00000391944 F8WEM9 126 aa11.86□□□□□ -0.51
ERCC2-203ENST00000391944 COX7CP15954 63 aa11.86□□□□□ -0.51
ERCC2-203ENST00000391944 DNAH17Q9UFH2 4485 aa11.85□□□□□ -0.51
ERCC2-203ENST00000391944 SPRR4Q96PI1 79 aa11.85□□□□□ -0.51
ERCC2-203ENST00000391944 BCE1O60756 84 aa11.84□□□□□ -0.51
ERCC2-203ENST00000391944 UBE2AP49459 152 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms