RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 MIFP14174 115 aa11.9□□□□□ -0.5
ERCC2-201ENST00000391941 BCE1O60756 84 aa11.9□□□□□ -0.5
ERCC2-201ENST00000391941 H3BQ85 93 aa11.89□□□□□ -0.51
ERCC2-201ENST00000391941 KLKP1Q107X0 134 aa11.88□□□□□ -0.51
ERCC2-201ENST00000391941 Q6ZRP5 223 aa11.88□□□□□ -0.51
ERCC2-201ENST00000391941 INAFM1C9JVW0 142 aa11.86□□□□□ -0.51
ERCC2-201ENST00000391941 STAB1Q9NY15 2570 aa11.86□□□□□ -0.51
ERCC2-201ENST00000391941 NREPQ16612 68 aa11.85□□□□□ -0.51
ERCC2-201ENST00000391941 SRRM2Q9UQ35 2752 aaKnown RBP11.85□□□□□ -0.51
ERCC2-201ENST00000391941 C15orf56Q8N910 161 aa11.85□□□□□ -0.51
ERCC2-201ENST00000391941 RPL37AP8A6NKH3 93 aa11.85□□□□□ -0.51
ERCC2-201ENST00000391941 LINC00336Q6ZUF6 198 aa11.84□□□□□ -0.51
ERCC2-201ENST00000391941 PKIGQ9Y2B9 76 aa11.84□□□□□ -0.51
ERCC2-201ENST00000391941 TRBV7-6A0A0J9YX20 115 aa11.84□□□□□ -0.51
ERCC2-201ENST00000391941 FP248Q71RG6 208 aaPredicted RBP11.84□□□□□ -0.51
ERCC2-201ENST00000391941 KPRPQ5T749 579 aaPredicted RBP11.83□□□□□ -0.52
ERCC2-201ENST00000391941 Q6ZTC4 211 aa11.83□□□□□ -0.52
ERCC2-201ENST00000391941 M0R378 163 aa11.83□□□□□ -0.52
ERCC2-201ENST00000391941 SERTAD4-AS1Q5TG53 156 aa11.83□□□□□ -0.52
ERCC2-201ENST00000391941 LINC00528Q8N1L1 170 aa11.83□□□□□ -0.52
ERCC2-201ENST00000391941 IGKV2D-24A0A075B6R9 120 aa11.82□□□□□ -0.52
ERCC2-201ENST00000391941 SERP1Q9Y6X1 66 aa11.82□□□□□ -0.52
ERCC2-201ENST00000391941 A0A0G2JQZ4 141 aa11.81□□□□□ -0.52
ERCC2-201ENST00000391941 A0A1W2PNN7 141 aa11.81□□□□□ -0.52
ERCC2-201ENST00000391941 EGFEM1PQ0D2K5 195 aa11.81□□□□□ -0.52
ERCC2-201ENST00000391941 FAM229BQ4G0N7 80 aa11.81□□□□□ -0.52
ERCC2-201ENST00000391941 FAM168BA1KXE4 195 aa11.81□□□□□ -0.52
ERCC2-201ENST00000391941 KRTAP26-1Q6PEX3 210 aa11.81□□□□□ -0.52
ERCC2-201ENST00000391941 EPM2AB3EWF7 344 aa11.8□□□□□ -0.52
ERCC2-201ENST00000391941 IGKV4-1P06312 121 aa11.79□□□□□ -0.52
ERCC2-201ENST00000391941 OXLD1Q5BKU9 147 aa11.79□□□□□ -0.52
ERCC2-201ENST00000391941 COL6A5A8TX70 2615 aa11.79□□□□□ -0.52
ERCC2-201ENST00000391941 TMEM254Q8TBM7 123 aa11.79□□□□□ -0.52
ERCC2-201ENST00000391941 ESRGQ1W209 222 aa11.78□□□□□ -0.52
ERCC2-201ENST00000391941 MPLKIPQ8TAP9 179 aa11.78□□□□□ -0.52
ERCC2-201ENST00000391941 ST20-AS1Q8NBB2 130 aa11.77□□□□□ -0.53
ERCC2-201ENST00000391941 HIGD2AQ9BW72 106 aa11.77□□□□□ -0.53
ERCC2-201ENST00000391941 PRO0628Q9UI54 55 aa11.77□□□□□ -0.53
ERCC2-201ENST00000391941 FAM30AQ9NZY2 134 aa11.76□□□□□ -0.53
ERCC2-201ENST00000391941 Q8N377 158 aa11.76□□□□□ -0.53
ERCC2-201ENST00000391941 LYSTQ99698 3801 aa11.75□□□□□ -0.53
ERCC2-201ENST00000391941 LRCOL1A6NCL2 159 aa11.74□□□□□ -0.53
ERCC2-201ENST00000391941 CASC10Q5T4H9 136 aa11.74□□□□□ -0.53
ERCC2-201ENST00000391941 C7orf33Q8WU49 177 aa11.73□□□□□ -0.53
ERCC2-201ENST00000391941 KMT2BQ9UMN6 2715 aaPredicted RBP11.73□□□□□ -0.53
ERCC2-201ENST00000391941 PRB2P02812 416 aaPredicted RBP11.71□□□□□ -0.53
ERCC2-201ENST00000391941 NKAPP1Q8N9T2 125 aa11.71□□□□□ -0.53
ERCC2-201ENST00000391941 SMIM29Q86T20 159 aa11.71□□□□□ -0.54
ERCC2-201ENST00000391941 J3QKU1 62 aa11.69□□□□□ -0.54
ERCC2-201ENST00000391941 NBEAL1Q6ZS30 2694 aa11.69□□□□□ -0.54
ERCC2-201ENST00000391941 DNAH10Q8IVF4 4471 aa11.69□□□□□ -0.54
ERCC2-201ENST00000391941 SYCNQ0VAF6 134 aa11.69□□□□□ -0.54
ERCC2-201ENST00000391941 DEFB116Q30KQ4 102 aa11.69□□□□□ -0.54
ERCC2-201ENST00000391941 OCR1Q9BZK8 76 aa11.69□□□□□ -0.54
ERCC2-201ENST00000391941 NDUFC1O43677 76 aa11.69□□□□□ -0.54
ERCC2-201ENST00000391941 Q9BRP9 147 aa11.69□□□□□ -0.54
ERCC2-201ENST00000391941 ERC2-IT1O76042 136 aa11.68□□□□□ -0.54
ERCC2-201ENST00000391941 C4orf48Q5BLP8 95 aa11.68□□□□□ -0.54
ERCC2-201ENST00000391941 COL7A1Q02388 2944 aa11.68□□□□□ -0.54
ERCC2-201ENST00000391941 A0A1W2PNM2 257 aa11.67□□□□□ -0.54
ERCC2-201ENST00000391941 KRTAP10-11P60412 298 aa11.66□□□□□ -0.54
ERCC2-201ENST00000391941 PRR4Q16378 134 aa11.66□□□□□ -0.54
ERCC2-201ENST00000391941 KCNQ1DNQ9H478 68 aa11.66□□□□□ -0.54
ERCC2-201ENST00000391941 SMIM26A0A096LP01 95 aa11.65□□□□□ -0.54
ERCC2-201ENST00000391941 PRYO14603 147 aa11.65□□□□□ -0.55
ERCC2-201ENST00000391941 H3BNG1 76 aa11.64□□□□□ -0.55
ERCC2-201ENST00000391941 A0A0U1RQV1 116 aa11.63□□□□□ -0.55
ERCC2-201ENST00000391941 KRTAP7-1Q8IUC3 87 aa11.62□□□□□ -0.55
ERCC2-201ENST00000391941 BRK1Q8WUW1 75 aa11.62□□□□□ -0.55
ERCC2-201ENST00000391941 C1orf195Q5TG92 126 aa11.62□□□□□ -0.55
ERCC2-201ENST00000391941 TENM2Q9NT68 2774 aa11.62□□□□□ -0.55
ERCC2-201ENST00000391941 IGLV5-48A0A075B6I7 105 aa11.61□□□□□ -0.55
ERCC2-201ENST00000391941 C1orf137Q5JT78 98 aa11.6□□□□□ -0.55
ERCC2-201ENST00000391941 DEFB131BA0A096LNP1 70 aa11.6□□□□□ -0.55
ERCC2-201ENST00000391941 FUSP35637 526 aaKnown RBP eCLIP11.6□□□□□ -0.551e-9■■■□□ 15.8
ERCC2-201ENST00000391941 K7EQZ3 153 aa11.59□□□□□ -0.55
ERCC2-201ENST00000391941 LINC01556Q5JQF7 62 aa11.59□□□□□ -0.55
ERCC2-201ENST00000391941 ATP5EP56381 51 aaPredicted RBP11.58□□□□□ -0.56
ERCC2-201ENST00000391941 Q6ZRX8 168 aa11.57□□□□□ -0.56
ERCC2-201ENST00000391941 ETDCA0A1B0GVM5 59 aa11.57□□□□□ -0.56
ERCC2-201ENST00000391941 UBE2BP63146 152 aa11.57□□□□□ -0.56
ERCC2-201ENST00000391941 DHRS4-AS1Q9P1J3 65 aa11.55□□□□□ -0.56
ERCC2-201ENST00000391941 KRTAP4-16G5E9R7 235 aaPredicted RBP11.54□□□□□ -0.56
ERCC2-201ENST00000391941 DSCR10P59022 87 aa11.54□□□□□ -0.56
ERCC2-201ENST00000391941 CMYA5Q8N3K9 4069 aa11.53□□□□□ -0.56
ERCC2-201ENST00000391941 IGLV1-50A0A075B6I6 118 aa11.52□□□□□ -0.57
ERCC2-201ENST00000391941 TNP2Q05952 138 aa11.52□□□□□ -0.57
ERCC2-201ENST00000391941 C11orf45Q8TAV5 145 aa11.51□□□□□ -0.57
ERCC2-201ENST00000391941 PRLHP81277 87 aa11.5□□□□□ -0.57
ERCC2-201ENST00000391941 Q8NBF4 154 aa11.5□□□□□ -0.57
ERCC2-201ENST00000391941 IGKV2-24A0A0C4DH68 120 aa11.5□□□□□ -0.57
ERCC2-201ENST00000391941 RPL37AP61513 92 aaKnown RBP11.49□□□□□ -0.57
ERCC2-201ENST00000391941 WFDC13Q8IUB5 93 aa11.49□□□□□ -0.57
ERCC2-201ENST00000391941 DNAH1Q9P2D7 4330 aa11.49□□□□□ -0.57
ERCC2-201ENST00000391941 TLX1NBP0CAT3 122 aa11.49□□□□□ -0.57
ERCC2-201ENST00000391941 SPRR1AP35321 89 aa11.48□□□□□ -0.57
ERCC2-201ENST00000391941 DNAH10OSP0CZ25 163 aa11.47□□□□□ -0.57
ERCC2-201ENST00000391941 PLA2G2DQ9UNK4 145 aa11.47□□□□□ -0.57
ERCC2-201ENST00000391941 LINC00588Q9Y4M8 146 aa11.47□□□□□ -0.57
ERCC2-201ENST00000391941 MRPL55Q7Z7F7 128 aaKnown RBP11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms