RNA–Protein interactions for RNA: ENST00000390654.7

COL23A1-201, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS P2 TSL 5 BASIC

Gene COL23A1, Length 3,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-201ENST00000390654 EGFEM1PQ0D2K5 195 aa13.81□□□□□ -0.2
COL23A1-201ENST00000390654 HRCT1Q6UXD1 115 aa13.81□□□□□ -0.2
COL23A1-201ENST00000390654 FAM236DA0A1B0GTK5 79 aa13.8□□□□□ -0.2
COL23A1-201ENST00000390654 H7BZZ5 65 aa13.8□□□□□ -0.2
COL23A1-201ENST00000390654 FAM236CP0DP71 79 aa13.8□□□□□ -0.2
COL23A1-201ENST00000390654 PDE6GP18545 87 aa13.8□□□□□ -0.2
COL23A1-201ENST00000390654 RPL37AP8A6NKH3 93 aa13.79□□□□□ -0.2
COL23A1-201ENST00000390654 LINC00528Q8N1L1 170 aa13.79□□□□□ -0.2
COL23A1-201ENST00000390654 BPY2O14599 106 aa13.78□□□□□ -0.2
COL23A1-201ENST00000390654 SERTAD4-AS1Q5TG53 156 aa13.78□□□□□ -0.2
COL23A1-201ENST00000390654 F8WEM9 126 aa13.77□□□□□ -0.2
COL23A1-201ENST00000390654 CXCL6P80162 114 aa13.77□□□□□ -0.2
COL23A1-201ENST00000390654 MGAM2Q2M2H8 2515 aa13.77□□□□□ -0.21
COL23A1-201ENST00000390654 NKAPP1Q8N9T2 125 aa13.75□□□□□ -0.21
COL23A1-201ENST00000390654 SYCNQ0VAF6 134 aa13.74□□□□□ -0.21
COL23A1-201ENST00000390654 FAM168BA1KXE4 195 aa13.74□□□□□ -0.21
COL23A1-201ENST00000390654 MRAPQ8TCY5 172 aa13.73□□□□□ -0.21
COL23A1-201ENST00000390654 DEFB131BA0A096LNP1 70 aa13.73□□□□□ -0.21
COL23A1-201ENST00000390654 NREPQ16612 68 aa13.73□□□□□ -0.21
COL23A1-201ENST00000390654 Q5XG85 94 aa13.73□□□□□ -0.21
COL23A1-201ENST00000390654 C5orf47Q569G3 176 aa13.72□□□□□ -0.21
COL23A1-201ENST00000390654 C7orf33Q8WU49 177 aa13.71□□□□□ -0.21
COL23A1-201ENST00000390654 CASC10Q5T4H9 136 aa13.7□□□□□ -0.22
COL23A1-201ENST00000390654 TRBV7-6A0A0J9YX20 115 aa13.69□□□□□ -0.22
COL23A1-201ENST00000390654 H3BQ85 93 aa13.68□□□□□ -0.22
COL23A1-201ENST00000390654 Q8N377 158 aa13.67□□□□□ -0.22
COL23A1-201ENST00000390654 C11orf45Q8TAV5 145 aa13.67□□□□□ -0.22
COL23A1-201ENST00000390654 KLKP1Q107X0 134 aa13.67□□□□□ -0.22
COL23A1-201ENST00000390654 ST20-AS1Q8NBB2 130 aa13.67□□□□□ -0.22
COL23A1-201ENST00000390654 KRTAP24-1Q3LI83 254 aa13.65□□□□□ -0.22
COL23A1-201ENST00000390654 CSMD3Q7Z407 3707 aa13.64□□□□□ -0.23
COL23A1-201ENST00000390654 IGKV4-1P06312 121 aa13.64□□□□□ -0.23
COL23A1-201ENST00000390654 A0A0G2JQZ4 141 aa13.62□□□□□ -0.23
COL23A1-201ENST00000390654 A0A1W2PNN7 141 aa13.62□□□□□ -0.23
COL23A1-201ENST00000390654 TMEM254Q8TBM7 123 aa13.61□□□□□ -0.23
COL23A1-201ENST00000390654 LINC01556Q5JQF7 62 aa13.61□□□□□ -0.23
COL23A1-201ENST00000390654 Q9BRP9 147 aa13.6□□□□□ -0.23
COL23A1-201ENST00000390654 KCNQ1DNQ9H478 68 aa13.6□□□□□ -0.23
COL23A1-201ENST00000390654 STAB2Q8WWQ8 2551 aa13.6□□□□□ -0.23
COL23A1-201ENST00000390654 BCE1O60756 84 aa13.59□□□□□ -0.23
COL23A1-201ENST00000390654 SERP1Q9Y6X1 66 aa13.58□□□□□ -0.23
COL23A1-201ENST00000390654 TENM2Q9NT68 2774 aa13.58□□□□□ -0.23
COL23A1-201ENST00000390654 H3BNG1 76 aa13.58□□□□□ -0.24
COL23A1-201ENST00000390654 LINC00474Q9P2X8 69 aa13.58□□□□□ -0.24
COL23A1-201ENST00000390654 SRRM2Q9UQ35 2752 aaKnown RBP13.57□□□□□ -0.24
COL23A1-201ENST00000390654 ETDCA0A1B0GVM5 59 aa13.57□□□□□ -0.24
COL23A1-201ENST00000390654 FAM30AQ9NZY2 134 aa13.57□□□□□ -0.24
COL23A1-201ENST00000390654 ERC2-IT1O76042 136 aa13.56□□□□□ -0.24
COL23A1-201ENST00000390654 A0A1W2PNM2 257 aa13.55□□□□□ -0.24
COL23A1-201ENST00000390654 HIGD2AQ9BW72 106 aa13.55□□□□□ -0.24
COL23A1-201ENST00000390654 WIPF1O43516 503 aa13.55□□□□□ -0.24
COL23A1-201ENST00000390654 UBE2BP63146 152 aa13.53□□□□□ -0.24
COL23A1-201ENST00000390654 Q6ZRX8 168 aa13.53□□□□□ -0.24
COL23A1-201ENST00000390654 C1orf137Q5JT78 98 aa13.53□□□□□ -0.24
COL23A1-201ENST00000390654 FUSP35637 526 aaKnown RBP eCLIP13.53□□□□□ -0.24
COL23A1-201ENST00000390654 SMIM29Q86T20 159 aa13.53□□□□□ -0.24
COL23A1-201ENST00000390654 KRTAP7-1Q8IUC3 87 aa13.52□□□□□ -0.24
COL23A1-201ENST00000390654 LINC00588Q9Y4M8 146 aa13.5□□□□□ -0.25
COL23A1-201ENST00000390654 DEFB116Q30KQ4 102 aa13.5□□□□□ -0.25
COL23A1-201ENST00000390654 FP248Q71RG6 208 aaPredicted RBP13.5□□□□□ -0.25
COL23A1-201ENST00000390654 OCR1Q9BZK8 76 aa13.5□□□□□ -0.25
COL23A1-201ENST00000390654 IGLV1-50A0A075B6I6 118 aa13.49□□□□□ -0.25
COL23A1-201ENST00000390654 IGLV5-48A0A075B6I7 105 aa13.48□□□□□ -0.25
COL23A1-201ENST00000390654 LYSTQ99698 3801 aa13.48□□□□□ -0.25
COL23A1-201ENST00000390654 DNAH10OSP0CZ25 163 aa13.46□□□□□ -0.25
COL23A1-201ENST00000390654 DHRS4-AS1Q9P1J3 65 aa13.46□□□□□ -0.25
COL23A1-201ENST00000390654 EPM2AB3EWF7 344 aa13.46□□□□□ -0.25
COL23A1-201ENST00000390654 MPLKIPQ8TAP9 179 aa13.46□□□□□ -0.25
COL23A1-201ENST00000390654 IGKV2-24A0A0C4DH68 120 aa13.45□□□□□ -0.26
COL23A1-201ENST00000390654 FAM229BQ4G0N7 80 aa13.45□□□□□ -0.26
COL23A1-201ENST00000390654 DNAH10Q8IVF4 4471 aa13.45□□□□□ -0.26
COL23A1-201ENST00000390654 PRYO14603 147 aa13.45□□□□□ -0.26
COL23A1-201ENST00000390654 LINC00336Q6ZUF6 198 aa13.45□□□□□ -0.26
COL23A1-201ENST00000390654 KRTAP4-16G5E9R7 235 aaPredicted RBP13.44□□□□□ -0.26
COL23A1-201ENST00000390654 MRPL55Q7Z7F7 128 aaKnown RBP13.43□□□□□ -0.26
COL23A1-201ENST00000390654 CMYA5Q8N3K9 4069 aa13.43□□□□□ -0.26
COL23A1-201ENST00000390654 NDUFC1O43677 76 aa13.42□□□□□ -0.26
COL23A1-201ENST00000390654 K7EQZ3 153 aa13.42□□□□□ -0.26
COL23A1-201ENST00000390654 A0A0U1RQV1 116 aa13.41□□□□□ -0.26
COL23A1-201ENST00000390654 LRCOL1A6NCL2 159 aa13.41□□□□□ -0.26
COL23A1-201ENST00000390654 PRLHP81277 87 aa13.41□□□□□ -0.26
COL23A1-201ENST00000390654 SMIM26A0A096LP01 95 aa13.4□□□□□ -0.26
COL23A1-201ENST00000390654 Q8NBF4 154 aa13.4□□□□□ -0.26
COL23A1-201ENST00000390654 TNP2Q05952 138 aa13.38□□□□□ -0.27
COL23A1-201ENST00000390654 TLX1NBP0CAT3 122 aa13.37□□□□□ -0.27
COL23A1-201ENST00000390654 DSCR10P59022 87 aa13.37□□□□□ -0.27
COL23A1-201ENST00000390654 PRR4Q16378 134 aa13.37□□□□□ -0.27
COL23A1-201ENST00000390654 SPRR1AP35321 89 aa13.36□□□□□ -0.27
COL23A1-201ENST00000390654 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.36□□□□□ -0.27
COL23A1-201ENST00000390654 COL7A1Q02388 2944 aa13.35□□□□□ -0.27
COL23A1-201ENST00000390654 LINC00476Q8WZB0 136 aa13.35□□□□□ -0.27
COL23A1-201ENST00000390654 F8WDY8 70 aa13.34□□□□□ -0.27
COL23A1-201ENST00000390654 REG3GQ6UW15 175 aa13.34□□□□□ -0.27
COL23A1-201ENST00000390654 PLA2G2DQ9UNK4 145 aa13.31□□□□□ -0.28
COL23A1-201ENST00000390654 WFDC13Q8IUB5 93 aa13.31□□□□□ -0.28
COL23A1-201ENST00000390654 A0A096LNI7 61 aa13.3□□□□□ -0.28
COL23A1-201ENST00000390654 K7EIL1 84 aa13.3□□□□□ -0.28
COL23A1-201ENST00000390654 DNAH1Q9P2D7 4330 aa13.29□□□□□ -0.28
COL23A1-201ENST00000390654 RPL37AP61513 92 aaKnown RBP13.29□□□□□ -0.28
COL23A1-201ENST00000390654 A0A087WSZ3 146 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms