RNA–Protein interactions for RNA: ENST00000380324.7

USP3-202, Transcript of ubiquitin specific peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP3, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-202ENST00000380324 A0A096LNI7 61 aa7.71□□□□□ -1.18
USP3-202ENST00000380324 M0R2N4 97 aa7.7□□□□□ -1.18
USP3-202ENST00000380324 CNBPP62633 177 aaKnown RBP7.7□□□□□ -1.18
USP3-202ENST00000380324 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.7□□□□□ -1.18
USP3-202ENST00000380324 MRPL55Q7Z7F7 128 aaKnown RBP7.7□□□□□ -1.18
USP3-202ENST00000380324 IGLV5-37A0A075B6J1 123 aa7.69□□□□□ -1.18
USP3-202ENST00000380324 LINC00846Q9NV44 126 aa7.69□□□□□ -1.18
USP3-202ENST00000380324 IGLV1-50A0A075B6I6 118 aa7.69□□□□□ -1.18
USP3-202ENST00000380324 CCKP06307 115 aa7.68□□□□□ -1.18
USP3-202ENST00000380324 RBM3P98179 157 aaKnown RBP7.68□□□□□ -1.18
USP3-202ENST00000380324 SDIM1Q6ZPB5 146 aa7.68□□□□□ -1.18
USP3-202ENST00000380324 C14orf177Q52M58 125 aa7.68□□□□□ -1.18
USP3-202ENST00000380324 LINC00643Q86TS7 51 aa7.68□□□□□ -1.18
USP3-202ENST00000380324 TGP01266 2768 aa7.68□□□□□ -1.18
USP3-202ENST00000380324 FBN3Q75N90 2809 aa7.68□□□□□ -1.18
USP3-202ENST00000380324 C16orf90A8MZG2 172 aa7.67□□□□□ -1.18
USP3-202ENST00000380324 PRYO14603 147 aa7.67□□□□□ -1.18
USP3-202ENST00000380324 CHTF8P0CG12 524 aa7.67□□□□□ -1.18
USP3-202ENST00000380324 VPS13DQ5THJ4 4388 aa7.67□□□□□ -1.18
USP3-202ENST00000380324 KMT2AQ03164 3969 aa7.66□□□□□ -1.18
USP3-202ENST00000380324 ETDCA0A1B0GVM5 59 aa7.66□□□□□ -1.18
USP3-202ENST00000380324 Q6ZRX8 168 aa7.66□□□□□ -1.18
USP3-202ENST00000380324 LRCOL1A6NCL2 159 aa7.66□□□□□ -1.18
USP3-202ENST00000380324 Q6ZRN7 208 aaPredicted RBP7.66□□□□□ -1.18
USP3-202ENST00000380324 DSCR8Q96T75 97 aa7.66□□□□□ -1.18
USP3-202ENST00000380324 TRBV7-7A0A0K0K1E9 115 aa7.65□□□□□ -1.18
USP3-202ENST00000380324 Q6ZQT0 140 aa7.65□□□□□ -1.18
USP3-202ENST00000380324 DEFB105AQ8NG35 78 aa7.65□□□□□ -1.18
USP3-202ENST00000380324 KRTAP4-16G5E9R7 235 aaPredicted RBP7.64□□□□□ -1.19
USP3-202ENST00000380324 H3BQ85 93 aa7.64□□□□□ -1.19
USP3-202ENST00000380324 Q6Q795 121 aa7.64□□□□□ -1.19
USP3-202ENST00000380324 Q9BRP9 147 aa7.64□□□□□ -1.19
USP3-202ENST00000380324 A0A1W2PNN7 141 aa7.64□□□□□ -1.19
USP3-202ENST00000380324 B5MCH6 92 aa7.64□□□□□ -1.19
USP3-202ENST00000380324 GHRHP01286 108 aa7.64□□□□□ -1.19
USP3-202ENST00000380324 SPRR1AP35321 89 aa7.63□□□□□ -1.19
USP3-202ENST00000380324 NDUFV3P56181 108 aaKnown RBP7.63□□□□□ -1.19
USP3-202ENST00000380324 LOC110117498A0A087WWA1 95 aa7.62□□□□□ -1.19
USP3-202ENST00000380324 IGKV3D-7A0A0C4DH55 119 aa7.62□□□□□ -1.19
USP3-202ENST00000380324 REG3GQ6UW15 175 aa7.62□□□□□ -1.19
USP3-202ENST00000380324 ANAPC13Q9BS18 74 aa7.62□□□□□ -1.19
USP3-202ENST00000380324 DHRS4-AS1Q9P1J3 65 aa7.62□□□□□ -1.19
USP3-202ENST00000380324 UBE2BP63146 152 aa7.61□□□□□ -1.19
USP3-202ENST00000380324 C9orf163Q8N9P6 203 aa7.61□□□□□ -1.19
USP3-202ENST00000380324 FUSP35637 526 aaKnown RBP eCLIP7.6□□□□□ -1.19
USP3-202ENST00000380324 C3orf22Q8N5N4 141 aa7.6□□□□□ -1.19
USP3-202ENST00000380324 ST20-AS1Q8NBB2 130 aa7.6□□□□□ -1.19
USP3-202ENST00000380324 FAM236AA0A1B0GUQ0 79 aa7.6□□□□□ -1.19
USP3-202ENST00000380324 FAM236BA0A1B0GV22 79 aa7.6□□□□□ -1.19
USP3-202ENST00000380324 TRBV7-4A0A0J9YYF1 115 aa7.59□□□□□ -1.19
USP3-202ENST00000380324 ERC2-IT1O76042 136 aa7.59□□□□□ -1.19
USP3-202ENST00000380324 PRLHP81277 87 aa7.59□□□□□ -1.19
USP3-202ENST00000380324 PHF5AQ7RTV0 110 aaKnown RBP7.59□□□□□ -1.19
USP3-202ENST00000380324 Q8N377 158 aa7.59□□□□□ -1.19
USP3-202ENST00000380324 Q6JHZ5 121 aa7.58□□□□□ -1.2
USP3-202ENST00000380324 IMUPQ9GZP8 106 aa7.58□□□□□ -1.2
USP3-202ENST00000380324 UBL5Q9BZL1 73 aa7.58□□□□□ -1.2
USP3-202ENST00000380324 PDE6GP18545 87 aa7.57□□□□□ -1.2
USP3-202ENST00000380324 LINC01547P58512 204 aaPredicted RBP7.57□□□□□ -1.2
USP3-202ENST00000380324 FAM19A1Q7Z5A9 133 aa7.57□□□□□ -1.2
USP3-202ENST00000380324 PANO1I0J062 215 aa7.57□□□□□ -1.2
USP3-202ENST00000380324 DNAH2Q9P225 4427 aa7.56□□□□□ -1.2
USP3-202ENST00000380324 A0A087WTM6 91 aa7.56□□□□□ -1.2
USP3-202ENST00000380324 KRTAP11-1Q8IUC1 163 aa7.56□□□□□ -1.2
USP3-202ENST00000380324 LY6G6CO95867 125 aa7.55□□□□□ -1.2
USP3-202ENST00000380324 Q6ZR54 194 aa7.55□□□□□ -1.2
USP3-202ENST00000380324 DPH3Q96FX2 82 aa7.55□□□□□ -1.2
USP3-202ENST00000380324 A0A087WVE0 104 aa7.55□□□□□ -1.2
USP3-202ENST00000380324 HIGD2AQ9BW72 106 aa7.55□□□□□ -1.2
USP3-202ENST00000380324 HIST1H4AP62805 103 aaKnown RBP7.54□□□□□ -1.2
USP3-202ENST00000380324 PKIGQ9Y2B9 76 aa7.54□□□□□ -1.2
USP3-202ENST00000380324 HECTD4Q9Y4D8 3996 aa7.53□□□□□ -1.2
USP3-202ENST00000380324 IGLV5-48A0A075B6I7 105 aa7.53□□□□□ -1.2
USP3-202ENST00000380324 Q6ZVQ6 151 aa7.53□□□□□ -1.2
USP3-202ENST00000380324 LINC00474Q9P2X8 69 aa7.53□□□□□ -1.2
USP3-202ENST00000380324 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.53□□□□□ -1.2
USP3-202ENST00000380324 SRRM2Q9UQ35 2752 aaKnown RBP7.53□□□□□ -1.2
USP3-202ENST00000380324 ATP5EP2Q5VTU8 51 aa7.52□□□□□ -1.21
USP3-202ENST00000380324 RTL8CO15255 209 aa7.51□□□□□ -1.21
USP3-202ENST00000380324 HAMPP81172 84 aa7.51□□□□□ -1.21
USP3-202ENST00000380324 C3orf84H3BNL1 204 aa7.51□□□□□ -1.21
USP3-202ENST00000380324 KRTAP21-3Q3LHN1 58 aa7.51□□□□□ -1.21
USP3-202ENST00000380324 C1orf134Q5TEV5 83 aa7.5□□□□□ -1.21
USP3-202ENST00000380324 SPACA4Q8TDM5 124 aa7.5□□□□□ -1.21
USP3-202ENST00000380324 EPM2AB3EWF7 344 aa7.49□□□□□ -1.21
USP3-202ENST00000380324 TNP2Q05952 138 aa7.49□□□□□ -1.21
USP3-202ENST00000380324 C1orf137Q5JT78 98 aa7.48□□□□□ -1.21
USP3-202ENST00000380324 SCXQ7RTU7 201 aa7.48□□□□□ -1.21
USP3-202ENST00000380324 CCDC179H3BU77 68 aa7.47□□□□□ -1.21
USP3-202ENST00000380324 UBE2AP49459 152 aa7.47□□□□□ -1.21
USP3-202ENST00000380324 LINC00476Q8WZB0 136 aa7.47□□□□□ -1.21
USP3-202ENST00000380324 WWC2-AS2Q96NR7 200 aa7.47□□□□□ -1.21
USP3-202ENST00000380324 DNAH17Q9UFH2 4485 aa7.46□□□□□ -1.22
USP3-202ENST00000380324 IGLV5-52A0A0A0MRZ9 124 aa7.46□□□□□ -1.22
USP3-202ENST00000380324 SMIM29Q86T20 159 aa7.46□□□□□ -1.22
USP3-202ENST00000380324 F8WEM9 126 aa7.45□□□□□ -1.22
USP3-202ENST00000380324 A0A0G2JQZ4 141 aa7.45□□□□□ -1.22
USP3-202ENST00000380324 A0A1W2PNM2 257 aa7.45□□□□□ -1.22
USP3-202ENST00000380324 FRAS1Q86XX4 4008 aa7.44□□□□□ -1.22
USP3-202ENST00000380324 BCE1O60756 84 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms