RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 IGLV6-57P01721 117 aa12.71□□□□□ -0.37
U2AF1-202ENST00000380276 LGALS3P17931 250 aaKnown RBP12.71□□□□□ -0.37
U2AF1-202ENST00000380276 HERVK_113P61574 105 aa12.71□□□□□ -0.37
U2AF1-202ENST00000380276 SVBPQ8N300 66 aa12.71□□□□□ -0.37
U2AF1-202ENST00000380276 FSIP2Q5CZC0 6907 aa12.7□□□□□ -0.38
U2AF1-202ENST00000380276 HRCT1Q6UXD1 115 aa12.7□□□□□ -0.38
U2AF1-202ENST00000380276 ZNF73O43830 326 aaPredicted RBP12.69□□□□□ -0.38
U2AF1-202ENST00000380276 LEPROTL1O95214 131 aa12.69□□□□□ -0.38
U2AF1-202ENST00000380276 NDUFC2O95298 119 aa12.69□□□□□ -0.38
U2AF1-202ENST00000380276 PLNP26678 52 aa12.69□□□□□ -0.38
U2AF1-202ENST00000380276 TMEM238LA0A1B0GVL6 79 aa12.67□□□□□ -0.38
U2AF1-202ENST00000380276 NMUP48645 174 aa12.67□□□□□ -0.38
U2AF1-202ENST00000380276 HINT1P49773 126 aaPredicted RBP12.67□□□□□ -0.38
U2AF1-202ENST00000380276 PMCHL2Q9BQD1 86 aa12.67□□□□□ -0.38
U2AF1-202ENST00000380276 C9orf92A6NGG3 77 aa12.66□□□□□ -0.38
U2AF1-202ENST00000380276 PCOTHQ58A44 107 aa12.66□□□□□ -0.38
U2AF1-202ENST00000380276 LIMD2Q9BT23 127 aa12.66□□□□□ -0.38
U2AF1-202ENST00000380276 IGLV8-61A0A075B6I0 122 aa12.65□□□□□ -0.38
U2AF1-202ENST00000380276 DPM2O94777 84 aa12.65□□□□□ -0.38
U2AF1-202ENST00000380276 YPEL4Q96NS1 127 aa12.64□□□□□ -0.39
U2AF1-202ENST00000380276 SOSTDC1Q6X4U4 206 aa12.63□□□□□ -0.39
U2AF1-202ENST00000380276 FABP4P15090 132 aa12.62□□□□□ -0.39
U2AF1-202ENST00000380276 IGKCP01834 107 aa12.61□□□□□ -0.39
U2AF1-202ENST00000380276 CBY1Q9Y3M2 126 aa12.61□□□□□ -0.39
U2AF1-202ENST00000380276 EIF4EBP3O60516 100 aaPredicted RBP12.6□□□□□ -0.39
U2AF1-202ENST00000380276 SERF1AO75920 110 aa12.6□□□□□ -0.39
U2AF1-202ENST00000380276 SLC25A34Q6PIV7 304 aa12.6□□□□□ -0.39
U2AF1-202ENST00000380276 OR13C6PQ8NH95 151 aa12.6□□□□□ -0.39
U2AF1-202ENST00000380276 HSPB8Q9UJY1 196 aa12.6□□□□□ -0.39
U2AF1-202ENST00000380276 MT1HP80294 61 aa12.59□□□□□ -0.39
U2AF1-202ENST00000380276 A0A0J9YXY3 114 aa12.58□□□□□ -0.4
U2AF1-202ENST00000380276 C5orf52A6NGY3 159 aa12.58□□□□□ -0.4
U2AF1-202ENST00000380276 ADAMTSL4-AS1Q5T5F5 129 aa12.58□□□□□ -0.4
U2AF1-202ENST00000380276 TRGC2P03986 189 aa12.57□□□□□ -0.4
U2AF1-202ENST00000380276 LAMTOR3Q9UHA4 124 aa12.57□□□□□ -0.4
U2AF1-202ENST00000380276 CFC1BP0CG36 223 aa12.56□□□□□ -0.4
U2AF1-202ENST00000380276 KRTAP19-2Q3LHN2 52 aa12.56□□□□□ -0.4
U2AF1-202ENST00000380276 LINC00310P59036 64 aa12.54□□□□□ -0.4
U2AF1-202ENST00000380276 DHRS4-AS1Q9P1J3 65 aa12.54□□□□□ -0.4
U2AF1-202ENST00000380276 SPRR1BP22528 89 aa12.53□□□□□ -0.4
U2AF1-202ENST00000380276 Q1RN00 199 aa12.51□□□□□ -0.41
U2AF1-202ENST00000380276 DEFB105AQ8NG35 78 aa12.51□□□□□ -0.41
U2AF1-202ENST00000380276 SPANXCQ9NY87 97 aa12.51□□□□□ -0.41
U2AF1-202ENST00000380276 TAL2Q16559 108 aa12.5□□□□□ -0.41
U2AF1-202ENST00000380276 E9PLD3 99 aa12.49□□□□□ -0.41
U2AF1-202ENST00000380276 H7C2G1 150 aa12.49□□□□□ -0.41
U2AF1-202ENST00000380276 LINC00308Q8TCZ7 52 aa12.49□□□□□ -0.41
U2AF1-202ENST00000380276 COX7BP24311 80 aa12.48□□□□□ -0.41
U2AF1-202ENST00000380276 M0R2T5 61 aa12.46□□□□□ -0.41
U2AF1-202ENST00000380276 PRO1933Q9H354 126 aa12.46□□□□□ -0.41
U2AF1-202ENST00000380276 SPANXDQ9BXN6 97 aa12.45□□□□□ -0.42
U2AF1-202ENST00000380276 C6orf99Q4VX62 202 aa12.44□□□□□ -0.42
U2AF1-202ENST00000380276 ELOF1P60002 83 aaKnown RBP12.43□□□□□ -0.42
U2AF1-202ENST00000380276 CD164Q04900 197 aa12.42□□□□□ -0.42
U2AF1-202ENST00000380276 LITAFQ99732 161 aa12.42□□□□□ -0.42
U2AF1-202ENST00000380276 KRTAP10-6P60371 365 aaPredicted RBP12.41□□□□□ -0.42
U2AF1-202ENST00000380276 COX6B2Q6YFQ2 88 aa12.41□□□□□ -0.42
U2AF1-202ENST00000380276 TEX49A0A1B0GTD5 131 aa12.4□□□□□ -0.42
U2AF1-202ENST00000380276 TIMM17BO60830 172 aa12.39□□□□□ -0.43
U2AF1-202ENST00000380276 ZNF815PA8K554 130 aa12.38□□□□□ -0.43
U2AF1-202ENST00000380276 AKR1D1P51857 326 aa12.38□□□□□ -0.43
U2AF1-202ENST00000380276 LINC00518Q8N0U6 118 aa12.37□□□□□ -0.43
U2AF1-202ENST00000380276 C1orf195Q5TG92 126 aa12.36□□□□□ -0.43
U2AF1-202ENST00000380276 A0A0G2JQZ4 141 aa12.35□□□□□ -0.43
U2AF1-202ENST00000380276 RPL37P61927 97 aaKnown RBP12.35□□□□□ -0.43
U2AF1-202ENST00000380276 SYS1-DBNDD2H3BUS1 97 aa12.34□□□□□ -0.43
U2AF1-202ENST00000380276 TTTY13Q9BZ97 58 aa12.33□□□□□ -0.44
U2AF1-202ENST00000380276 Q5XG85 94 aa12.31□□□□□ -0.44
U2AF1-202ENST00000380276 SMIM29Q86T20 159 aa12.31□□□□□ -0.44
U2AF1-202ENST00000380276 A0A1B0GWB2 263 aa12.28□□□□□ -0.44
U2AF1-202ENST00000380276 TRBV7-6A0A0J9YX20 115 aa12.27□□□□□ -0.45
U2AF1-202ENST00000380276 A6NDN8 102 aa12.27□□□□□ -0.45
U2AF1-202ENST00000380276 LINC01545Q5VT33 79 aa12.26□□□□□ -0.45
U2AF1-202ENST00000380276 SCGB1D4Q6XE38 83 aa12.26□□□□□ -0.45
U2AF1-202ENST00000380276 COLCA2A8K830 154 aa12.25□□□□□ -0.45
U2AF1-202ENST00000380276 TCL1BO95988 128 aa12.25□□□□□ -0.45
U2AF1-202ENST00000380276 IGLV5-48A0A075B6I7 105 aa12.24□□□□□ -0.45
U2AF1-202ENST00000380276 PET117Q6UWS5 81 aa12.23□□□□□ -0.45
U2AF1-202ENST00000380276 COPS9Q8WXC6 57 aa12.22□□□□□ -0.45
U2AF1-202ENST00000380276 F8WEM9 126 aa12.19□□□□□ -0.46
U2AF1-202ENST00000380276 Q6Q795 121 aa12.19□□□□□ -0.46
U2AF1-202ENST00000380276 NHP2Q9NX24 153 aaKnown RBP12.19□□□□□ -0.46
U2AF1-202ENST00000380276 A4D1N5 150 aa12.17□□□□□ -0.46
U2AF1-202ENST00000380276 IFITM1P13164 125 aa12.16□□□□□ -0.46
U2AF1-202ENST00000380276 PCP2Q8IVA1 136 aa12.16□□□□□ -0.46
U2AF1-202ENST00000380276 FLGP20930 4061 aaPredicted RBP12.16□□□□□ -0.46
U2AF1-202ENST00000380276 HIST1H2BKO60814 126 aa12.15□□□□□ -0.46
U2AF1-202ENST00000380276 HIST1H2BJP06899 126 aa12.15□□□□□ -0.46
U2AF1-202ENST00000380276 C3orf79P0CE67 100 aa12.15□□□□□ -0.46
U2AF1-202ENST00000380276 HIST1H2BOP23527 126 aa12.15□□□□□ -0.46
U2AF1-202ENST00000380276 HIST1H2BBP33778 126 aa12.15□□□□□ -0.46
U2AF1-202ENST00000380276 HIST1H2BDP58876 126 aa12.15□□□□□ -0.46
U2AF1-202ENST00000380276 HIST1H2BCP62807 126 aa12.15□□□□□ -0.46
U2AF1-202ENST00000380276 HIST2H2BEQ16778 126 aa12.15□□□□□ -0.46
U2AF1-202ENST00000380276 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.15□□□□□ -0.46
U2AF1-202ENST00000380276 HIST1H2BHQ93079 126 aa12.15□□□□□ -0.46
U2AF1-202ENST00000380276 HIST1H2BNQ99877 126 aa12.15□□□□□ -0.46
U2AF1-202ENST00000380276 HIST1H2BMQ99879 126 aa12.15□□□□□ -0.46
U2AF1-202ENST00000380276 KRTDAPP60985 99 aa12.14□□□□□ -0.47
U2AF1-202ENST00000380276 MUSTN1Q8IVN3 82 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 295.8 ms