RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 A0A096LNI7 61 aa9.65□□□□□ -0.86
SNX2-201ENST00000379516 IGKV2-24A0A0C4DH68 120 aa9.65□□□□□ -0.86
SNX2-201ENST00000379516 LRCOL1A6NCL2 159 aa9.65□□□□□ -0.86
SNX2-201ENST00000379516 IGLV1-50A0A075B6I6 118 aa9.64□□□□□ -0.87
SNX2-201ENST00000379516 C16orf90A8MZG2 172 aa9.64□□□□□ -0.87
SNX2-201ENST00000379516 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.64□□□□□ -0.87
SNX2-201ENST00000379516 Q6ZRN7 208 aaPredicted RBP9.64□□□□□ -0.87
SNX2-201ENST00000379516 MRPL55Q7Z7F7 128 aaKnown RBP9.64□□□□□ -0.87
SNX2-201ENST00000379516 LAMTOR3Q9UHA4 124 aa9.62□□□□□ -0.87
SNX2-201ENST00000379516 H3BQ85 93 aa9.62□□□□□ -0.87
SNX2-201ENST00000379516 PRYO14603 147 aa9.62□□□□□ -0.87
SNX2-201ENST00000379516 C21orf62-AS1Q17RA5 79 aa9.61□□□□□ -0.87
SNX2-201ENST00000379516 GHRHP01286 108 aa9.6□□□□□ -0.87
SNX2-201ENST00000379516 SCGB1A1P11684 91 aa9.6□□□□□ -0.87
SNX2-201ENST00000379516 A0A1W2PNN7 141 aa9.59□□□□□ -0.87
SNX2-201ENST00000379516 FBN3Q75N90 2809 aa9.59□□□□□ -0.87
SNX2-201ENST00000379516 RBM3P98179 157 aaKnown RBP9.59□□□□□ -0.87
SNX2-201ENST00000379516 C9orf163Q8N9P6 203 aa9.59□□□□□ -0.87
SNX2-201ENST00000379516 SMCR5Q8TEV8 140 aa9.59□□□□□ -0.87
SNX2-201ENST00000379516 ETDCA0A1B0GVM5 59 aa9.58□□□□□ -0.88
SNX2-201ENST00000379516 KRTAP4-16G5E9R7 235 aaPredicted RBP9.58□□□□□ -0.88
SNX2-201ENST00000379516 CCKP06307 115 aa9.58□□□□□ -0.88
SNX2-201ENST00000379516 SPRR1AP35321 89 aa9.58□□□□□ -0.88
SNX2-201ENST00000379516 B5MCH6 92 aa9.57□□□□□ -0.88
SNX2-201ENST00000379516 CHTF8P0CG12 524 aa9.57□□□□□ -0.88
SNX2-201ENST00000379516 Q6ZRX8 168 aa9.57□□□□□ -0.88
SNX2-201ENST00000379516 SDIM1Q6ZPB5 146 aa9.55□□□□□ -0.88
SNX2-201ENST00000379516 Q6ZR54 194 aa9.55□□□□□ -0.88
SNX2-201ENST00000379516 DHRS4-AS1Q9P1J3 65 aa9.55□□□□□ -0.88
SNX2-201ENST00000379516 REG3GQ6UW15 175 aa9.55□□□□□ -0.88
SNX2-201ENST00000379516 LINC00643Q86TS7 51 aa9.54□□□□□ -0.88
SNX2-201ENST00000379516 Q9BRP9 147 aa9.54□□□□□ -0.88
SNX2-201ENST00000379516 LINC00846Q9NV44 126 aa9.54□□□□□ -0.88
SNX2-201ENST00000379516 PKIGQ9Y2B9 76 aa9.54□□□□□ -0.88
SNX2-201ENST00000379516 DSCR8Q96T75 97 aa9.53□□□□□ -0.88
SNX2-201ENST00000379516 KMT2AQ03164 3969 aa9.53□□□□□ -0.88
SNX2-201ENST00000379516 A0A087WTM6 91 aa9.53□□□□□ -0.88
SNX2-201ENST00000379516 NDUFV3P56181 108 aaKnown RBP9.53□□□□□ -0.88
SNX2-201ENST00000379516 DEFB105AQ8NG35 78 aa9.53□□□□□ -0.88
SNX2-201ENST00000379516 LY6G6CO95867 125 aa9.52□□□□□ -0.89
SNX2-201ENST00000379516 Q6ZQT0 140 aa9.52□□□□□ -0.89
SNX2-201ENST00000379516 LOC110117498A0A087WWA1 95 aa9.52□□□□□ -0.89
SNX2-201ENST00000379516 DNAH2Q9P225 4427 aa9.51□□□□□ -0.89
SNX2-201ENST00000379516 UBE2BP63146 152 aa9.5□□□□□ -0.89
SNX2-201ENST00000379516 PHF5AQ7RTV0 110 aaKnown RBP9.5□□□□□ -0.89
SNX2-201ENST00000379516 WWC2-AS2Q96NR7 200 aa9.5□□□□□ -0.89
SNX2-201ENST00000379516 LINC00474Q9P2X8 69 aa9.5□□□□□ -0.89
SNX2-201ENST00000379516 Q6Q795 121 aa9.49□□□□□ -0.89
SNX2-201ENST00000379516 Q8N377 158 aa9.49□□□□□ -0.89
SNX2-201ENST00000379516 PDE6GP18545 87 aa9.48□□□□□ -0.89
SNX2-201ENST00000379516 C1orf134Q5TEV5 83 aa9.48□□□□□ -0.89
SNX2-201ENST00000379516 DPH3Q96FX2 82 aa9.48□□□□□ -0.89
SNX2-201ENST00000379516 TRBV7-7A0A0K0K1E9 115 aa9.47□□□□□ -0.89
SNX2-201ENST00000379516 PANO1I0J062 215 aa9.47□□□□□ -0.89
SNX2-201ENST00000379516 FUSP35637 526 aaKnown RBP eCLIP9.47□□□□□ -0.89
SNX2-201ENST00000379516 ST20-AS1Q8NBB2 130 aa9.47□□□□□ -0.89
SNX2-201ENST00000379516 TRBV7-4A0A0J9YYF1 115 aa9.47□□□□□ -0.89
SNX2-201ENST00000379516 ERC2-IT1O76042 136 aa9.47□□□□□ -0.89
SNX2-201ENST00000379516 LINC01547P58512 204 aaPredicted RBP9.47□□□□□ -0.89
SNX2-201ENST00000379516 FAM19A1Q7Z5A9 133 aa9.47□□□□□ -0.89
SNX2-201ENST00000379516 TGP01266 2768 aa9.47□□□□□ -0.89
SNX2-201ENST00000379516 RTL8CO15255 209 aa9.44□□□□□ -0.9
SNX2-201ENST00000379516 PRLHP81277 87 aa9.44□□□□□ -0.9
SNX2-201ENST00000379516 KRTAP11-1Q8IUC1 163 aa9.44□□□□□ -0.9
SNX2-201ENST00000379516 LINC00476Q8WZB0 136 aa9.44□□□□□ -0.9
SNX2-201ENST00000379516 IMUPQ9GZP8 106 aa9.44□□□□□ -0.9
SNX2-201ENST00000379516 C3orf22Q8N5N4 141 aa9.43□□□□□ -0.9
SNX2-201ENST00000379516 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.43□□□□□ -0.9
SNX2-201ENST00000379516 HECTD4Q9Y4D8 3996 aa9.43□□□□□ -0.9
SNX2-201ENST00000379516 IGLV5-48A0A075B6I7 105 aa9.43□□□□□ -0.9
SNX2-201ENST00000379516 IGKV3D-7A0A0C4DH55 119 aa9.43□□□□□ -0.9
SNX2-201ENST00000379516 SPACA4Q8TDM5 124 aa9.43□□□□□ -0.9
SNX2-201ENST00000379516 UBL5Q9BZL1 73 aa9.43□□□□□ -0.9
SNX2-201ENST00000379516 Q6JHZ5 121 aa9.42□□□□□ -0.9
SNX2-201ENST00000379516 HIGD2AQ9BW72 106 aa9.41□□□□□ -0.9
SNX2-201ENST00000379516 IGLV5-52A0A0A0MRZ9 124 aa9.38□□□□□ -0.91
SNX2-201ENST00000379516 DNAH17Q9UFH2 4485 aa9.38□□□□□ -0.91
SNX2-201ENST00000379516 EPM2AB3EWF7 344 aa9.37□□□□□ -0.91
SNX2-201ENST00000379516 C3orf84H3BNL1 204 aa9.37□□□□□ -0.91
SNX2-201ENST00000379516 TNP2Q05952 138 aa9.37□□□□□ -0.91
SNX2-201ENST00000379516 ANAPC13Q9BS18 74 aa9.37□□□□□ -0.91
SNX2-201ENST00000379516 UBE2AP49459 152 aa9.36□□□□□ -0.91
SNX2-201ENST00000379516 DNAH6Q9C0G6 4158 aa9.36□□□□□ -0.91
SNX2-201ENST00000379516 FAM236AA0A1B0GUQ0 79 aa9.35□□□□□ -0.91
SNX2-201ENST00000379516 FAM236BA0A1B0GV22 79 aa9.35□□□□□ -0.91
SNX2-201ENST00000379516 H0Y9J4 135 aa9.35□□□□□ -0.91
SNX2-201ENST00000379516 Q6ZVQ6 151 aa9.35□□□□□ -0.91
SNX2-201ENST00000379516 ALMS1Q8TCU4 4167 aa9.34□□□□□ -0.91
SNX2-201ENST00000379516 ATP5EP2Q5VTU8 51 aa9.34□□□□□ -0.91
SNX2-201ENST00000379516 SMIM29Q86T20 159 aa9.34□□□□□ -0.91
SNX2-201ENST00000379516 BCE1O60756 84 aa9.34□□□□□ -0.91
SNX2-201ENST00000379516 C1orf137Q5JT78 98 aa9.34□□□□□ -0.91
SNX2-201ENST00000379516 HAMPP81172 84 aa9.32□□□□□ -0.92
SNX2-201ENST00000379516 HIST1H4AP62805 103 aaKnown RBP9.32□□□□□ -0.92
SNX2-201ENST00000379516 F8WEM9 126 aa9.31□□□□□ -0.92
SNX2-201ENST00000379516 A0A087WVE0 104 aa9.31□□□□□ -0.92
SNX2-201ENST00000379516 PLAC8Q9NZF1 115 aa9.3□□□□□ -0.92
SNX2-201ENST00000379516 A0A1W2PNM2 257 aa9.29□□□□□ -0.92
SNX2-201ENST00000379516 KRTAP13-1Q8IUC0 172 aa9.28□□□□□ -0.92
SNX2-201ENST00000379516 FRAS1Q86XX4 4008 aa9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms