RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 Q8N9L7 120 aa9.34□□□□□ -0.91
CLCNKA-202ENST00000375692 TENM3Q9P273 2699 aa9.34□□□□□ -0.91
CLCNKA-202ENST00000375692 H3BQ85 93 aa9.34□□□□□ -0.91
CLCNKA-202ENST00000375692 WFDC10BQ8IUB3 73 aa9.34□□□□□ -0.91
CLCNKA-202ENST00000375692 F8WEM9 126 aa9.33□□□□□ -0.92
CLCNKA-202ENST00000375692 Q6ZRU5 148 aa9.33□□□□□ -0.92
CLCNKA-202ENST00000375692 RETNQ9HD89 108 aa9.32□□□□□ -0.92
CLCNKA-202ENST00000375692 TRBV7-6A0A0J9YX20 115 aa9.31□□□□□ -0.92
CLCNKA-202ENST00000375692 M0R378 163 aa9.31□□□□□ -0.92
CLCNKA-202ENST00000375692 SERP1Q9Y6X1 66 aa9.31□□□□□ -0.92
CLCNKA-202ENST00000375692 LINC00528Q8N1L1 170 aa9.3□□□□□ -0.92
CLCNKA-202ENST00000375692 EPM2AB3EWF7 344 aa9.29□□□□□ -0.92
CLCNKA-202ENST00000375692 KRTAP26-1Q6PEX3 210 aa9.29□□□□□ -0.92
CLCNKA-202ENST00000375692 DNAH3Q8TD57 4116 aa9.29□□□□□ -0.92
CLCNKA-202ENST00000375692 C15orf56Q8N910 161 aa9.28□□□□□ -0.92
CLCNKA-202ENST00000375692 BPY2O14599 106 aa9.28□□□□□ -0.92
CLCNKA-202ENST00000375692 NREPQ16612 68 aa9.28□□□□□ -0.92
CLCNKA-202ENST00000375692 Q6ZRP5 223 aa9.27□□□□□ -0.92
CLCNKA-202ENST00000375692 DEFB105AQ8NG35 78 aa9.27□□□□□ -0.92
CLCNKA-202ENST00000375692 C3orf84H3BNL1 204 aa9.26□□□□□ -0.93
CLCNKA-202ENST00000375692 KPRPQ5T749 579 aaPredicted RBP9.26□□□□□ -0.93
CLCNKA-202ENST00000375692 DNHD1Q96M86 4753 aa9.25□□□□□ -0.93
CLCNKA-202ENST00000375692 IGKV4-1P06312 121 aa9.24□□□□□ -0.93
CLCNKA-202ENST00000375692 MRAPQ8TCY5 172 aa9.24□□□□□ -0.93
CLCNKA-202ENST00000375692 K7EIL1 84 aa9.24□□□□□ -0.93
CLCNKA-202ENST00000375692 TMEM254Q8TBM7 123 aa9.23□□□□□ -0.93
CLCNKA-202ENST00000375692 FP248Q71RG6 208 aaPredicted RBP9.23□□□□□ -0.93
CLCNKA-202ENST00000375692 LINC00474Q9P2X8 69 aa9.22□□□□□ -0.93
CLCNKA-202ENST00000375692 ESRGQ1W209 222 aa9.21□□□□□ -0.93
CLCNKA-202ENST00000375692 SERTAD4-AS1Q5TG53 156 aa9.21□□□□□ -0.93
CLCNKA-202ENST00000375692 Q6ZTC4 211 aa9.21□□□□□ -0.93
CLCNKA-202ENST00000375692 IGKV2D-24A0A075B6R9 120 aa9.21□□□□□ -0.94
CLCNKA-202ENST00000375692 Q8N377 158 aa9.21□□□□□ -0.94
CLCNKA-202ENST00000375692 NDUFC1O43677 76 aa9.19□□□□□ -0.94
CLCNKA-202ENST00000375692 C1orf43Q9BWL3 253 aa9.19□□□□□ -0.94
CLCNKA-202ENST00000375692 LINC00336Q6ZUF6 198 aa9.19□□□□□ -0.94
CLCNKA-202ENST00000375692 C7orf33Q8WU49 177 aa9.19□□□□□ -0.94
CLCNKA-202ENST00000375692 SMIM26A0A096LP01 95 aa9.18□□□□□ -0.94
CLCNKA-202ENST00000375692 OCR1Q9BZK8 76 aa9.18□□□□□ -0.94
CLCNKA-202ENST00000375692 SYCNQ0VAF6 134 aa9.18□□□□□ -0.94
CLCNKA-202ENST00000375692 NKAPP1Q8N9T2 125 aa9.18□□□□□ -0.94
CLCNKA-202ENST00000375692 COL7A1Q02388 2944 aa9.18□□□□□ -0.94
CLCNKA-202ENST00000375692 RPL37AP8A6NKH3 93 aa9.18□□□□□ -0.94
CLCNKA-202ENST00000375692 KCNQ1DNQ9H478 68 aa9.17□□□□□ -0.94
CLCNKA-202ENST00000375692 HIGD2AQ9BW72 106 aa9.15□□□□□ -0.94
CLCNKA-202ENST00000375692 FAM168BA1KXE4 195 aa9.15□□□□□ -0.95
CLCNKA-202ENST00000375692 A0A0U1RQV1 116 aa9.14□□□□□ -0.95
CLCNKA-202ENST00000375692 ERC2-IT1O76042 136 aa9.14□□□□□ -0.95
CLCNKA-202ENST00000375692 FAM229BQ4G0N7 80 aa9.14□□□□□ -0.95
CLCNKA-202ENST00000375692 IGLV5-48A0A075B6I7 105 aa9.14□□□□□ -0.95
CLCNKA-202ENST00000375692 H3BNG1 76 aa9.14□□□□□ -0.95
CLCNKA-202ENST00000375692 ST20-AS1Q8NBB2 130 aa9.14□□□□□ -0.95
CLCNKA-202ENST00000375692 A0A1W2PNM2 257 aa9.13□□□□□ -0.95
CLCNKA-202ENST00000375692 PRYO14603 147 aa9.13□□□□□ -0.95
CLCNKA-202ENST00000375692 Q9BRP9 147 aa9.13□□□□□ -0.95
CLCNKA-202ENST00000375692 FAM30AQ9NZY2 134 aa9.13□□□□□ -0.95
CLCNKA-202ENST00000375692 STAB2Q8WWQ8 2551 aa9.13□□□□□ -0.95
CLCNKA-202ENST00000375692 SMIM29Q86T20 159 aa9.12□□□□□ -0.95
CLCNKA-202ENST00000375692 HUWE1Q7Z6Z7 4374 aaKnown RBP9.11□□□□□ -0.95
CLCNKA-202ENST00000375692 LINC01556Q5JQF7 62 aa9.11□□□□□ -0.95
CLCNKA-202ENST00000375692 ATP5EP56381 51 aaPredicted RBP9.1□□□□□ -0.95
CLCNKA-202ENST00000375692 Q6ZRX8 168 aa9.1□□□□□ -0.95
CLCNKA-202ENST00000375692 MEGF8Q7Z7M0 2845 aa9.1□□□□□ -0.95
CLCNKA-202ENST00000375692 FUSP35637 526 aaKnown RBP eCLIP9.1□□□□□ -0.95
CLCNKA-202ENST00000375692 MPLKIPQ8TAP9 179 aa9.1□□□□□ -0.95
CLCNKA-202ENST00000375692 C1orf137Q5JT78 98 aa9.09□□□□□ -0.95
CLCNKA-202ENST00000375692 CASC10Q5T4H9 136 aa9.09□□□□□ -0.95
CLCNKA-202ENST00000375692 DEFB131BA0A096LNP1 70 aa9.08□□□□□ -0.96
CLCNKA-202ENST00000375692 KRTAP4-16G5E9R7 235 aaPredicted RBP9.08□□□□□ -0.96
CLCNKA-202ENST00000375692 DHRS4-AS1Q9P1J3 65 aa9.08□□□□□ -0.96
CLCNKA-202ENST00000375692 PRO0628Q9UI54 55 aa9.08□□□□□ -0.96
CLCNKA-202ENST00000375692 ETDCA0A1B0GVM5 59 aa9.07□□□□□ -0.96
CLCNKA-202ENST00000375692 KRTAP7-1Q8IUC3 87 aa9.07□□□□□ -0.96
CLCNKA-202ENST00000375692 IGLV1-50A0A075B6I6 118 aa9.07□□□□□ -0.96
CLCNKA-202ENST00000375692 C11orf45Q8TAV5 145 aa9.07□□□□□ -0.96
CLCNKA-202ENST00000375692 TNP2Q05952 138 aa9.06□□□□□ -0.96
CLCNKA-202ENST00000375692 A0A0G2JQZ4 141 aa9.05□□□□□ -0.96
CLCNKA-202ENST00000375692 A0A1W2PNN7 141 aa9.05□□□□□ -0.96
CLCNKA-202ENST00000375692 F8WDY8 70 aa9.05□□□□□ -0.96
CLCNKA-202ENST00000375692 Q8NBF4 154 aa9.04□□□□□ -0.96
CLCNKA-202ENST00000375692 PRKDCP78527 4128 aaKnown RBP9.04□□□□□ -0.96
CLCNKA-202ENST00000375692 DSCR10P59022 87 aa9.04□□□□□ -0.96
CLCNKA-202ENST00000375692 DNAH9Q9NYC9 4486 aa9.04□□□□□ -0.96
CLCNKA-202ENST00000375692 K7EQZ3 153 aa9.03□□□□□ -0.96
CLCNKA-202ENST00000375692 SPRR1AP35321 89 aa9.03□□□□□ -0.96
CLCNKA-202ENST00000375692 TLX1NBP0CAT3 122 aa9.02□□□□□ -0.97
CLCNKA-202ENST00000375692 UBE2BP63146 152 aa9.02□□□□□ -0.97
CLCNKA-202ENST00000375692 PLA2G2DQ9UNK4 145 aa9.02□□□□□ -0.97
CLCNKA-202ENST00000375692 DNAH10OSP0CZ25 163 aa9.01□□□□□ -0.97
CLCNKA-202ENST00000375692 BRK1Q8WUW1 75 aa9.01□□□□□ -0.97
CLCNKA-202ENST00000375692 LRCOL1A6NCL2 159 aa9□□□□□ -0.97
CLCNKA-202ENST00000375692 SPRR4Q96PI1 79 aa9□□□□□ -0.97
CLCNKA-202ENST00000375692 DEFB116Q30KQ4 102 aa8.99□□□□□ -0.97
CLCNKA-202ENST00000375692 MRPL55Q7Z7F7 128 aaKnown RBP8.99□□□□□ -0.97
CLCNKA-202ENST00000375692 IGLV5-37A0A075B6J1 123 aa8.99□□□□□ -0.97
CLCNKA-202ENST00000375692 A0A1B0GW54 56 aa8.99□□□□□ -0.97
CLCNKA-202ENST00000375692 B9D2Q9BPU9 175 aa8.99□□□□□ -0.97
CLCNKA-202ENST00000375692 LCE6AA0A183 80 aa8.98□□□□□ -0.97
CLCNKA-202ENST00000375692 PKIGQ9Y2B9 76 aa8.98□□□□□ -0.97
CLCNKA-202ENST00000375692 LINC00588Q9Y4M8 146 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms