RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 Q8N814 137 aa12.08□□□□□ -0.48
RXRB-202ENST00000374685 TRAV7A0A075B6U4 112 aa12.08□□□□□ -0.48
RXRB-202ENST00000374685 KLKP1Q107X0 134 aa12.08□□□□□ -0.48
RXRB-202ENST00000374685 PKIGQ9Y2B9 76 aa12.08□□□□□ -0.48
RXRB-202ENST00000374685 GVQW2A0A096LPI5 108 aaPredicted RBP12.06□□□□□ -0.48
RXRB-202ENST00000374685 Q6ZRP5 223 aa12.06□□□□□ -0.48
RXRB-202ENST00000374685 JMJD7-PLA2G4BH0Y9G9 81 aa12.05□□□□□ -0.48
RXRB-202ENST00000374685 DNAH10OSP0CZ25 163 aa12.05□□□□□ -0.48
RXRB-202ENST00000374685 SYCNQ0VAF6 134 aa12.05□□□□□ -0.48
RXRB-202ENST00000374685 LINC00167Q96N53 147 aa12.03□□□□□ -0.48
RXRB-202ENST00000374685 IGLV6-57P01721 117 aa12.02□□□□□ -0.49
RXRB-202ENST00000374685 CSMD3Q7Z407 3707 aa12.02□□□□□ -0.49
RXRB-202ENST00000374685 UBL5Q9BZL1 73 aa12.01□□□□□ -0.49
RXRB-202ENST00000374685 LINC00575Q6W349 94 aa12□□□□□ -0.49
RXRB-202ENST00000374685 VPREB1P12018 145 aa12□□□□□ -0.49
RXRB-202ENST00000374685 SEC61GP60059 68 aa11.99□□□□□ -0.49
RXRB-202ENST00000374685 Q6ZQY7 126 aa11.99□□□□□ -0.49
RXRB-202ENST00000374685 DIRC1Q969H9 104 aa11.99□□□□□ -0.49
RXRB-202ENST00000374685 V9GYY9 64 aa11.98□□□□□ -0.49
RXRB-202ENST00000374685 DNAH10Q8IVF4 4471 aa11.98□□□□□ -0.49
RXRB-202ENST00000374685 ZNF73O43830 326 aaPredicted RBP11.98□□□□□ -0.49
RXRB-202ENST00000374685 LAMTOR3Q9UHA4 124 aa11.97□□□□□ -0.49
RXRB-202ENST00000374685 C1orf195Q5TG92 126 aa11.96□□□□□ -0.49
RXRB-202ENST00000374685 MUC7Q8TAX7 377 aa11.96□□□□□ -0.49
RXRB-202ENST00000374685 TRBV7-6A0A0J9YX20 115 aa11.96□□□□□ -0.49
RXRB-202ENST00000374685 DNAH9Q9NYC9 4486 aa11.96□□□□□ -0.5
RXRB-202ENST00000374685 F8WEM9 126 aa11.96□□□□□ -0.5
RXRB-202ENST00000374685 RMI2Q96E14 147 aa11.96□□□□□ -0.5
RXRB-202ENST00000374685 TMEM256-PLSCR3K7ERE1 68 aa11.95□□□□□ -0.5
RXRB-202ENST00000374685 ATP5EP56381 51 aaPredicted RBP11.95□□□□□ -0.5
RXRB-202ENST00000374685 SERTAD4-AS1Q5TG53 156 aa11.95□□□□□ -0.5
RXRB-202ENST00000374685 UBE2DNLQ8IWF7 75 aa11.95□□□□□ -0.5
RXRB-202ENST00000374685 FAM168BA1KXE4 195 aa11.95□□□□□ -0.5
RXRB-202ENST00000374685 NDUFC1O43677 76 aa11.95□□□□□ -0.5
RXRB-202ENST00000374685 LINC00474Q9P2X8 69 aa11.94□□□□□ -0.5
RXRB-202ENST00000374685 NKAPP1Q8N9T2 125 aa11.94□□□□□ -0.5
RXRB-202ENST00000374685 SNURFQ9Y675 71 aa11.94□□□□□ -0.5
RXRB-202ENST00000374685 RPL37AP8A6NKH3 93 aa11.93□□□□□ -0.5
RXRB-202ENST00000374685 BRK1Q8WUW1 75 aa11.93□□□□□ -0.5
RXRB-202ENST00000374685 M0R378 163 aa11.92□□□□□ -0.5
RXRB-202ENST00000374685 COX7BP24311 80 aa11.92□□□□□ -0.5
RXRB-202ENST00000374685 RBM3P98179 157 aaKnown RBP11.92□□□□□ -0.5
RXRB-202ENST00000374685 KRTAP1-5Q9BYS1 174 aa11.92□□□□□ -0.5
RXRB-202ENST00000374685 PSCAO43653 123 aa11.89□□□□□ -0.51
RXRB-202ENST00000374685 LINC01547P58512 204 aaPredicted RBP11.88□□□□□ -0.51
RXRB-202ENST00000374685 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.87□□□□□ -0.51
RXRB-202ENST00000374685 A0A0U1RQV1 116 aa11.87□□□□□ -0.51
RXRB-202ENST00000374685 C7orf33Q8WU49 177 aa11.87□□□□□ -0.51
RXRB-202ENST00000374685 DNAH1Q9P2D7 4330 aa11.86□□□□□ -0.51
RXRB-202ENST00000374685 DNAH7Q8WXX0 4024 aa11.86□□□□□ -0.51
RXRB-202ENST00000374685 Q6ZQT0 140 aa11.86□□□□□ -0.51
RXRB-202ENST00000374685 DEFB105AQ8NG35 78 aa11.86□□□□□ -0.51
RXRB-202ENST00000374685 IGKV2-24A0A0C4DH68 120 aa11.86□□□□□ -0.51
RXRB-202ENST00000374685 ELOF1P60002 83 aaKnown RBP11.85□□□□□ -0.51
RXRB-202ENST00000374685 LOC110117498A0A087WWA1 95 aa11.85□□□□□ -0.51
RXRB-202ENST00000374685 TRBV7-4A0A0J9YYF1 115 aa11.84□□□□□ -0.51
RXRB-202ENST00000374685 M0R2N4 97 aa11.84□□□□□ -0.51
RXRB-202ENST00000374685 CXCL6P80162 114 aa11.83□□□□□ -0.52
RXRB-202ENST00000374685 Q6ZVQ6 151 aa11.82□□□□□ -0.52
RXRB-202ENST00000374685 B9D2Q9BPU9 175 aa11.81□□□□□ -0.52
RXRB-202ENST00000374685 PLECQ15149 4684 aaKnown RBP11.8□□□□□ -0.52
RXRB-202ENST00000374685 HAMPP81172 84 aa11.8□□□□□ -0.52
RXRB-202ENST00000374685 PRKDCP78527 4128 aaKnown RBP11.79□□□□□ -0.52
RXRB-202ENST00000374685 APLNQ9ULZ1 77 aa11.79□□□□□ -0.52
RXRB-202ENST00000374685 LINC00528Q8N1L1 170 aa11.78□□□□□ -0.52
RXRB-202ENST00000374685 DNHD1Q96M86 4753 aa11.78□□□□□ -0.52
RXRB-202ENST00000374685 FAM229BQ4G0N7 80 aa11.78□□□□□ -0.52
RXRB-202ENST00000374685 MEGF8Q7Z7M0 2845 aa11.77□□□□□ -0.53
RXRB-202ENST00000374685 ERC2-IT1O76042 136 aa11.77□□□□□ -0.53
RXRB-202ENST00000374685 KRTAP7-1Q8IUC3 87 aa11.77□□□□□ -0.53
RXRB-202ENST00000374685 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.76□□□□□ -0.53
RXRB-202ENST00000374685 TMEM254Q8TBM7 123 aa11.74□□□□□ -0.53
RXRB-202ENST00000374685 NREPQ16612 68 aa11.74□□□□□ -0.53
RXRB-202ENST00000374685 MPLKIPQ8TAP9 179 aa11.74□□□□□ -0.53
RXRB-202ENST00000374685 TLX1NBP0CAT3 122 aa11.73□□□□□ -0.53
RXRB-202ENST00000374685 PDE6GP18545 87 aa11.73□□□□□ -0.53
RXRB-202ENST00000374685 ETDCA0A1B0GVM5 59 aa11.73□□□□□ -0.53
RXRB-202ENST00000374685 KCNQ1DNQ9H478 68 aa11.73□□□□□ -0.53
RXRB-202ENST00000374685 A0A096LNI7 61 aa11.73□□□□□ -0.53
RXRB-202ENST00000374685 CHTF8P0CG12 524 aa11.72□□□□□ -0.53
RXRB-202ENST00000374685 MRPL55Q7Z7F7 128 aaKnown RBP11.72□□□□□ -0.53
RXRB-202ENST00000374685 TGP01266 2768 aa11.72□□□□□ -0.53
RXRB-202ENST00000374685 SRRM2Q9UQ35 2752 aaKnown RBP11.71□□□□□ -0.54
RXRB-202ENST00000374685 IGLV1-50A0A075B6I6 118 aa11.7□□□□□ -0.54
RXRB-202ENST00000374685 ST20-AS1Q8NBB2 130 aa11.7□□□□□ -0.54
RXRB-202ENST00000374685 FUSP35637 526 aaKnown RBP eCLIP11.69□□□□□ -0.54
RXRB-202ENST00000374685 UBE2BP63146 152 aa11.69□□□□□ -0.54
RXRB-202ENST00000374685 PRR15Q8IV56 129 aa11.68□□□□□ -0.54
RXRB-202ENST00000374685 STARD9Q9P2P6 4700 aa11.68□□□□□ -0.54
RXRB-202ENST00000374685 Q9BRP9 147 aa11.68□□□□□ -0.54
RXRB-202ENST00000374685 SCXQ7RTU7 201 aa11.68□□□□□ -0.54
RXRB-202ENST00000374685 A0A1W2PNN7 141 aa11.67□□□□□ -0.54
RXRB-202ENST00000374685 BPY2O14599 106 aa11.67□□□□□ -0.54
RXRB-202ENST00000374685 Q6ZRX8 168 aa11.66□□□□□ -0.54
RXRB-202ENST00000374685 PRYO14603 147 aa11.66□□□□□ -0.54
RXRB-202ENST00000374685 PMAIP1Q13794 54 aa11.65□□□□□ -0.54
RXRB-202ENST00000374685 H3BQ85 93 aa11.64□□□□□ -0.55
RXRB-202ENST00000374685 Q8N377 158 aa11.64□□□□□ -0.55
RXRB-202ENST00000374685 NBDYA0A0U1RRE5 68 aa11.63□□□□□ -0.55
RXRB-202ENST00000374685 NUPR2A6NF83 97 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms